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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED


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Protein fig|565663.4.peg.1395: Enterococcus faecium Com15

This feature in The SEED Viewer

NCBI Taxonomy Id: 565663

Current Assignment: hypothetical protein
Translate Function Assignments


Context on contig NZ_GG670326 from base 149745 to 160560 (10816 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
1388 151535 149745 1791 -           Phage terminase large subunit  
1389 151981 151526 456 - -10         Phage terminase-like protein, small subunit  
1390 152032 152253 222 + 50         hypothetical protein  
1391 153431 152859 573 - 605         FIG00633209: hypothetical protein  
1392 153756 153472 285 - 40         FIG00627746: hypothetical protein  
1393 153866 153753 114 - -4         hypothetical protein  
1394 154199 153987 213 - 120         hypothetical protein  
1395 155196 155044 153 - 844         hypothetical protein  
1396 155737 155456 282 - 259         Phage transcriptional activator ArpU  
1397 156121 155963 159 - 225         hypothetical protein  
1398 156410 156111 300 - -11         FIG00631129: hypothetical protein  
1399 156610 156407 204 - -4         hypothetical protein  
1400 157319 156624 696 - 13         C-5 cytosine-specific DNA methylase  
1401 157777 157355 423 - 35         FIG00631830: hypothetical protein  
1402 157917 157774 144 - -4         hypothetical protein  
1403 158216 157917 300 - -1         FIG00631516: hypothetical protein  
1404 158380 158219 162 - 2         FIG00630198: hypothetical protein  
1405 158836 158672 165 - 291         FIG00632008: hypothetical protein  
1406 159110 158841 270 - 4         hypothetical protein  
1407 159871 159122 750 - 11         Phage replication initiation  
1408 160560 159874 687 - 2         Phage protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|565663.4.peg.1395 hypothetical protein
MKLSVEGTPEEIQELLQAIGSSKEQKVSVSNSDIDGICNCLNREKISNPY

MD5 = f24a0cf7ca50027d6a7e8981e40d7ebf


  DNA Sequence

>fig|565663.4.peg.1395 hypothetical protein
atgaaattatcagtagaaggcactccagaagaaatacaagaattgctccaagctattggt
agtagcaaggagcaaaaggtaagtgtttctaattcagatattgacggtatttgcaattgt
ttaaacagagaaaaaatatctaatccttactaa


  DNA with Flanking Sequence

>fig|565663.4.peg.1395 hypothetical protein
gattattcagatgatggatatagaagcggagagagacgcgattttagcagccttgatggc
attgagtataaacagtcgacaaatactttactattgctactgcgtgcctgaaaacttctc
aaactataagataagtcgtgagattggttattcagagagaagcattcaacggatgaagtc
agaagcattgatcgagttcgcagaagcatatagacatgggaaaataatcacttataaata
atttggcggttttttggcggaatgatggcggtttttagccatttatcagtgatattatgg
tagtgtcgaaagattagtgataagtctgagacaaaataataataaaaggaacatcgtttt
attattgtttcacaattaagcttcgatagacagcagcggaaatattaagaataaggatgt
gaattttaactccttctaaattgttcttattatctatcatccgttgctgtctattaattt
atgtattggagggaagaaaaatgaaattatcagtagaaggcactccagaagaaatacaag
aattgctccaagctattggtagtagcaaggagcaaaaggtaagtgtttctaattcagata
ttgacggtatttgcaattgtttaaacagagaaaaaatatctaatccttactaagagaaaa
tatgttcgttaatgaatttccaattttcctctgtagctctaccttgataatttttttgca
gttcacagatgaataaggaatcgttattatcaagtactgtatttaatttttcacacattt
gatttggattcaaattagttttaactaaccaaaaagatttttgtagctttatatatgccc
caaattcttttattatttcaaatactttatcatacttttgccctgggttattaagatcat
aactaatcatgtagggtttatacatgttgtcttgcacatccttgttttatatttcagcgg
accactcgctgataactaaaattatacgcttagtatttattttcacaatatgaatttgtc
actgtggcggaaagggtaacgcttaaaaataaggtcaatacgtcgagggatagccttaac
gttttatgatttgaccatgcaatgttcgattcattgccagtgacttaaggaacctacgga
aacaattcatctt


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
fig|333849.6.peg.4338 Enterococcus faecium DO FIG   hypothetical protein
fig|333849.6.peg.475 Enterococcus faecium DO FIG   hypothetical protein
fig|535206.4.peg.1027 Enterococcus faecium E1162 FIG   hypothetical protein
fig|546340.3.peg.113 Enterococcus faecium E1679 FIG   hypothetical protein
fig|565660.4.peg.2753 Enterococcus faecium 1,231,410 FIG   hypothetical protein
fig|565661.4.peg.1769 Enterococcus faecium 1,231,408 FIG   hypothetical protein
fig|565664.3.peg.2681 Enterococcus faecium C68 FIG   hypothetical protein
gb|EEV55014.1 Enterococcus faecium 1,231,410     predicted protein
gb|EEV56858.1 Enterococcus faecium 1,231,408     predicted protein
gi|257828388 Enterococcus faecium 1,231,410 NCBI   predicted protein
gi|257830251 Enterococcus faecium 1,231,408 NCBI   predicted protein
gi|257892028 Enterococcus faecium 1,231,410 NCBI   predicted protein
gi|257893872 Enterococcus faecium 1,231,408 NCBI   predicted protein
gi|258615831 Enterococcus faecium DO NCBI   hypothetical protein EfaeD_08976
ref|ZP_05671681.1 Enterococcus faecium 1,231,410 RefSeq   predicted protein
ref|ZP_05673525.1 Enterococcus faecium 1,231,408 RefSeq   predicted protein
ref|ZP_05713601.1 Enterococcus faecium DO RefSeq   hypothetical protein EfaeD_08976


  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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Key
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  Protein Families

No protein families found

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