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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|565663.4.peg.1389: Enterococcus faecium Com15

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NCBI Taxonomy Id: 565663

Current Assignment: Phage terminase-like protein, small subunit
Translate Function Assignments


Context on contig NZ_GG670326 from base 146180 to 157319 (11140 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
1384 146542 146180 363 -           FIG00628536: hypothetical protein  
1385 147749 146616 1134 - 73         Phage major capsid protein  
1386 148475 147750 726 - 0 4 1: 1   Prophage Clp protease-like protein  
1387 149745 148510 1236 - 34 4     Phage portal protein  
1388 151535 149745 1791 - -1 4     Phage terminase large subunit  
1389 151981 151526 456 - -10       Phage terminase-like protein, small subunit  
1390 152032 152253 222 + 50         hypothetical protein  
1391 153431 152859 573 - 605         FIG00633209: hypothetical protein  
1392 153756 153472 285 - 40         FIG00627746: hypothetical protein  
1393 153866 153753 114 - -4         hypothetical protein  
1394 154199 153987 213 - 120         hypothetical protein  
1395 155196 155044 153 - 844         hypothetical protein  
1396 155737 155456 282 - 259         Phage transcriptional activator ArpU  
1397 156121 155963 159 - 225         hypothetical protein  
1398 156410 156111 300 - -11         FIG00631129: hypothetical protein  
1399 156610 156407 204 - -4         hypothetical protein  
1400 157319 156624 696 - 13         C-5 cytosine-specific DNA methylase  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|565663.4.peg.1389 Phage terminase-like protein, small subunit
MPQPAKSAKLQLLQKNPNKKNTKELKKRADAEERLQMKSDNIRAPEWLNETATKAFDFLK
EELLEIDLITNGDIYPLAMYCYWYSEHLKLQNQAARVQRDYPEDIGNPLIKQLDTCSKNM
RSFGSDLGLSPSARAKLAIKMAQSEDDDEWT

MD5 = 1f0451854411aee60511364af478a064


  DNA Sequence

>fig|565663.4.peg.1389 Phage terminase-like protein, small subunit
atgccacaaccagcaaaaagtgcaaaactgcagcttttacaaaaaaatcctaataaaaaa
aatactaaagaattaaagaaacgtgcggatgcagaggaacgcctacaaatgaaaagcgat
aacatcagagctcctgaatggttgaatgaaactgcaacgaaagcatttgatttcttgaaa
gaagaattgcttgagatagatttaattacgaacggtgatatttatccactagctatgtat
tgctattggtactcagaacatttaaaactgcaaaatcaagcagctagagtgcaaagagat
tatccagaagatattggcaatccgctgatcaaacaattggatacttgttcaaaaaacatg
cggtcttttggaagtgatttggggttatcgccttcagctagagctaaattagctataaaa
atggctcaaagcgaggatgatgatgaatggacttga


  DNA with Flanking Sequence

>fig|565663.4.peg.1389 Phage terminase-like protein, small subunit
cggatgttttggacggaactgtaattatagaatcaacctatgcatctcgtgagactaatc
accaagttttagcgatacctagattagcgtgtgagagcttacgagtggaaatagaattta
gaagaagtaaagacaagtagccccccctatttagaaaagtagaaacaggagggcgccaag
accggtgagctccctccttcacacaaataccgcttttcaagttttttattagaccaattg
aaaaacatattcaccagctaagacctcagttttgtcgccgatgtagtcaaaactgatttc
tttactagccagagaagataattcataaatattagtcttcaaaacttgtaagatgttacg
ttcaataagtttgaaagaaataaaactgccattagagaaattcgcagtttgtatattcat
atcgtgactattgactttgataactttcataagtagcacctccaatctctatatatttta
ccatgaaagaaggtgatggaatgccacaaccagcaaaaagtgcaaaactgcagcttttac
aaaaaaatcctaataaaaaaaatactaaagaattaaagaaacgtgcggatgcagaggaac
gcctacaaatgaaaagcgataacatcagagctcctgaatggttgaatgaaactgcaacga
aagcatttgatttcttgaaagaagaattgcttgagatagatttaattacgaacggtgata
tttatccactagctatgtattgctattggtactcagaacatttaaaactgcaaaatcaag
cagctagagtgcaaagagattatccagaagatattggcaatccgctgatcaaacaattgg
atacttgttcaaaaaacatgcggtcttttggaagtgatttggggttatcgccttcagcta
gagctaaattagctataaaaatggctcaaagcgaggatgatgatgaatggacttgatgtc
attatcatattcagaacttgaaagatggtgggctgattacaaagaagaacaagcttcatg
gggaggaatcttattagaaccatatcctgaactgttgactacttggtacgctgaacgatt
gattgatggatctataccagcgagtaaagaaaacatccttgctgctaaacgtcatgtatt
agatttagaacggcaaggaacagaagaatttccgtggattttcgatgaagagattggaca
tcgtcccattcgttttattgaagataattgccgcccgactgaaggtgactttgaccggtt
tattttgcaaccatggcaacattttatcatcggttcgatgttcggatggattcataaaga
cacaggaattcgacgttttcgtgaagctttgacattcgttggtcgtaaaaatggaaagac
atctcttatcaacgggctatctgcttacatgcttggatatgatcatgaacaaggtgccaa
tgtctatgtgttggcc


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function
4 fig|565663.4.peg.1386 Prophage Clp protease-like protein
4 fig|565663.4.peg.1387 Phage portal protein
4 fig|565663.4.peg.1388 Phage terminase large subunit


  Attributes

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Key
Link Explains Key		 Value


  Protein Families

No protein families found

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