The SEED: an Annotation/Analysis Tool Provided by FIG
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Fid | Start | End | Size (nt) |
Gap | Find best clusters |
Pins | Fc-sc | SS | Ev | Function | Aliases | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
91 | 98815 | 97634 | 1182 | - | ![]() |
Staphopain B precursor (EC 3.4.22.-) | locus|SKAG_00091, protein_id|ZP_06788781.1, gi|294848034 | |||||
92 | 99907 | 98897 | 1011 | - | 81 | ![]() |
1: 4 | dlit(96922) dlit(3306605) |
Glutamyl endopeptidase precursor (EC 3.4.21.19), serine proteinase SspA | locus|SKAG_00092, protein_id|ZP_06788782.1, gi|294848035 | ||
93 | 101589 | 100435 | 1155 | - | 527 | ![]() |
2: 3 6 | N-acetyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.-) | locus|SKAG_00093, protein_id|ZP_06788783.1, gi|294848036 | |||
94 | 102795 | 101785 | 1011 | - | 195 | ![]() |
membrane protein, putative | locus|SKAG_00094, protein_id|ZP_06788784.1, gi|294848037 | ||||
95 | 102948 | 103367 | 420 | + | 152 | ![]() |
Putative ATL autolysin transcription regulator | locus|SKAG_00095, protein_id|ZP_06788785.1, gi|294848038 | ||||
96 | 107344 | 103574 | 3771 | - | 206 | ![]() |
3: 5 2 1 | Bifunctional autolysin Atl / N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28)/ endo-beta-N-acetylglucosaminidase (EC 3.2.1.96) | locus|SKAG_00097, protein_id|ZP_06788787.1, gi|294848040 | |||
97 | 108006 | 107572 | 435 | - | 227 | ![]() |
GNAT family acetyltransferase YjcF | locus|SKAG_00098, protein_id|ZP_06788788.1, gi|294848041 | ||||
98 | 108631 | 108161 | 471 | - | 154 | ![]() |
FIG01108206: hypothetical protein | locus|SKAG_00099, protein_id|ZP_06788789.1, gi|294848042 |
Annotation History / View All Related Annotations | Help on Annotations |
Id | Organism | Who | ASSIGN | Assignment |
---|---|---|---|---|
GO:0003700 | F:transcription factor activity | |||
GO:0005622 | C:intracellular | |||
GO:0006350 | P:transcription | |||
GO:0006355 | P:regulation of transcription, DNA-dependent | |||
cmr|SAUSA300_0954 | Staphylococcus aureus subsp. aureus USA300-FPR3757 | transcriptional regulator, MarR family | ||
fig|367830.3.peg.1519 | Staphylococcus aureus subsp. aureus USA300 | FIG | Putative ATL autolysin transcription regulator | |
fig|451515.3.peg.1047 | Staphylococcus aureus subsp. aureus USA300_FPR3757 | FIG | Putative ATL autolysin transcription regulator | |
fig|451516.9.peg.1051 | Staphylococcus aureus subsp. aureus USA300_TCH1516 | FIG | Putative ATL autolysin transcription regulator | |
fig|452948.4.peg.2063 | Staphylococcus aureus 930918-3 | FIG | Putative ATL autolysin transcription regulator | |
fig|455227.3.peg.1412 | Staphylococcus aureus D30 | FIG | Putative ATL autolysin transcription regulator | |
fig|546342.3.peg.1021 | Staphylococcus aureus subsp. aureus str. JKD6008 | FIG | Putative ATL autolysin transcription regulator | |
fig|546343.3.peg.1888 | Staphylococcus aureus subsp. aureus str. JKD6009 | FIG | Putative ATL autolysin transcription regulator | |
fig|553567.3.peg.1498 | Staphylococcus aureus A5948 | FIG | Putative ATL autolysin transcription regulator | |
fig|553594.3.peg.2034 | Staphylococcus aureus A9765 | FIG | Putative ATL autolysin transcription regulator | |
fig|644279.4.peg.1056 | Staphylococcus aureus subsp. aureus 132 | FIG | Putative ATL autolysin transcription regulator | |
gb|ABD22816.1 | Staphylococcus aureus subsp. aureus USA300_FPR3757 | transcriptional regulator, MarR family | ||
gb|EEV83046.1 | Staphylococcus aureus A5948 | ATL autolysin transcription regulator | ||
gb|EEW44329.1 | Staphylococcus aureus 930918-3 | hypothetical protein, probable ATL autolysin transcription regulator | ||
gb|EEW47069.1 | Staphylococcus aureus D30 | hypothetical protein, probable ATL autolysin transcription regulator | ||
gi|221138029 | Staphylococcus aureus subsp. aureus str. JKD6008 | NCBI | MarR family transcriptional regulator | |
gi|221141835 | Staphylococcus aureus subsp. aureus str. JKD6009 | NCBI | MarR family transcriptional regulator | |
gi|257860214 | Staphylococcus aureus A5948 | NCBI | ATL autolysin transcription regulator | |
gi|258451999 | Staphylococcus aureus A5948 | NCBI | ATL autolysin transcription regulator | |
gi|259159271 | Staphylococcus aureus 930918-3 | NCBI | hypothetical protein, probable ATL autolysin transcription regulator | |
gi|259162500 | Staphylococcus aureus D30 | NCBI | hypothetical protein, probable ATL autolysin transcription regulator | |
gi|87128302 | Staphylococcus aureus subsp. aureus USA300_FPR3757 | NCBI | transcriptional regulator, MarR family | |
gi|87162328 | Staphylococcus aureus subsp. aureus USA300_FPR3757 | NCBI | MarR family transcriptional regulator | |
img|637887606 | Staphylococcus aureus aureus USA300 | IMG | transcriptional regulator, MarR family | |
img|641772574 | Staphylococcus aureus aureus USA300_TCH959 | IMG | transcriptional regulator, MarR family protein | |
kegg|saa:SAUSA300_0954 | Staphylococcus aureus subsp. aureus USA300_FPR3757 | KEGG | MarR family transcriptional regulator | |
ref|YP_493652.1 | Staphylococcus aureus subsp. aureus USA300_FPR3757 | RefSeq | MarR family transcriptional regulator | |
ref|ZP_03562831.1 | Staphylococcus aureus subsp. aureus str. JKD6008 | RefSeq | MarR family transcriptional regulator | |
ref|ZP_03566328.1 | Staphylococcus aureus subsp. aureus str. JKD6009 | RefSeq | MarR family transcriptional regulator | |
ref|ZP_05700015.1 | Staphylococcus aureus A5948 | RefSeq | ATL autolysin transcription regulator | |
tr|Q2FI26 | Staphylococcus aureus (strain USA300) | TrEMBL | Transcriptional regulator, MarR family |
Score | Peg | Function |
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