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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|553590.4.peg.86: Staphylococcus aureus A9754

This feature in The SEED Viewer

NCBI Taxonomy Id: 553590

Current Assignment: Isochorismate synthase (EC 5.4.4.2) @ Menaquinone-specific isochorismate synthase (EC 5.4.4.2)
Translate Function Assignments



Context on contig NZ_ADJI01000001 from base 86697 to 98815 (12119 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
79 86697 88178 1482 +       2: 6 3   Poly(glycerol-phosphate) alpha-glucosyltransferase (EC 2.4.1.52) locus|SKAG_00079, protein_id|ZP_06788769.1, gi|294848022
80 88626 88267 360 - 88         FIG01107947: hypothetical protein locus|SKAG_00080, protein_id|ZP_06788770.1, gi|294848023
81 89100 90059 960 + 473     3: 3 4 5   Heme ABC type transporter HtsABC, heme-binding protein locus|SKAG_00081, protein_id|ZP_06788771.1, gi|294848024
82 90221 90105 117 - 45         FIG01108070: hypothetical protein locus|SKAG_00082, protein_id|ZP_06788772.1, gi|294848025
83 90515 90300 216 - 78         FIG01108199: hypothetical protein locus|SKAG_00083, protein_id|ZP_06788773.1, gi|294848026
84 90680 91231 552 + 164         Acetyltransferase (GNAT family) SAS0976 locus|SKAG_00084, protein_id|ZP_06788774.1, gi|294848027
85 92221 91283 939 - 51 13 2: 2 1   1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74) locus|SKAG_00085, protein_id|ZP_06788775.1, gi|294848028
86 92553 93764 1212 + 331   2: 2 1   Isochorismate synthase (EC 5.4.4.2) @ Menaquinone-specific isochorismate synthase (EC 5.4.4.2) locus|SKAG_00086, protein_id|ZP_06788776.1, gi|294848029
87 93751 95424 1674 + -14 23 2: 2 1   2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) locus|SKAG_00087, protein_id|ZP_06788777.1, gi|294848030
88 95411 96214 804 + -14 16 2: 2 1   2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) locus|SKAG_00088, protein_id|ZP_06788778.1, gi|294848031
89 96207 97028 822 + -8 10 2: 2 1 dlit(20643650) Naphthoate synthase (EC 4.1.3.36) locus|SKAG_00089, protein_id|ZP_06788779.1, gi|294848032
90 97596 97267 330 - 238         Staphostatin B locus|SKAG_00090, protein_id|ZP_06788780.1, gi|294848033
91 98815 97634 1182 - 37         Staphopain B precursor (EC 3.4.22.-) locus|SKAG_00091, protein_id|ZP_06788781.1, gi|294848034

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

Subsystem Curator Role
Menaquinone_and_Phylloquinone_Biosynthesis OlgaZ Menaquinone-specific isochorismate synthase (EC 5.4.4.2)
Menaquinone_biosynthesis_PanGenomes Smajic_Semra_user Menaquinone-specific isochorismate synthase (EC 5.4.4.2)


  Protein Sequence

>fig|553590.4.peg.86 Isochorismate synthase (EC 5.4.4.2) @ Menaquinone-specific isochorismate synthase (EC 5.4.4.2)
MRLNDNRTSYFGYKAIQLFKNNSKNKQSIFKDWEKLKHNITFIHPQSEKHHLRVVGGFQF
SSHKSDDEWREFGLNHFVLPEVLISTDNNGTFLTYTVKRESFTVEALNDLMDLFNNISDI
DVDEQIGGITRNEDIYKDDWRQLVVEAIESINNEEKIVLARRRLIKFDKDISIPYILKQA
YSKEKNSYIFLLESQDSIFFSQTPEQLIKVNNKILSTKAVAGTIKRSQDEDEDTKNVEAF
LKDNKNLIEHRFVVDSILHDIKPYITELHYDKTPKILKNDHLYHLYTEIKAPLKDDSYIS
LIDNLHPTPALGGYPKEFAMDFIEQKEFGTRGLYGAPVGYIDIYDDCEFIVAIRSMLIKK
AQATLFAGCGIVKDSDPDSELAETNLKFTPMMNALGVDMNGKS

MD5 = 7701c38d3e5c921a7e136c1eb73f87c3


  DNA Sequence

>fig|553590.4.peg.86 Isochorismate synthase (EC 5.4.4.2) @ Menaquinone-specific isochorismate synthase (EC 5.4.4.2)
atgcgtttgaatgataatcgaacgtcatattttggctacaaagcaattcaattattcaaa
aataattctaaaaataaacaatctatttttaaagactgggaaaaattaaaacataacatc
acatttatacatccgcaatctgagaaacatcatcttcgagttgttggagggttccaattt
tcaagtcataaatcagatgatgaatggcgagagtttggactaaatcattttgtattacct
gaagttttaatttcaactgataataatgggacatttttaacttatacagttaaaagggaa
agttttactgttgaggcattgaacgatttaatggatttgttcaacaatatatcggacata
gatgtggacgagcaaattgggggaattactagaaatgaagatatttataaagatgactgg
cgtcaacttgtagtagaagctatagaatctattaataatgaagaaaaaattgtactagca
cgtagacggttaataaagttcgataaagatatcagtattccatatattctaaagcaagca
tattctaaagaaaaaaacagttatatattcttgttagaatcacaagattctatattcttt
tcacaaacacctgaacaattaataaaggtcaataataaaatactatcgactaaagctgta
gcaggtacaattaaacgttcacaagatgaggacgaagatacaaaaaatgttgaagcattt
ttaaaagataataaaaacttaatcgaacatcgatttgttgttgacagtattttacatgat
attaaaccttatatcactgaattacattatgataagacgcctaaaattctaaaaaatgat
catttatatcacttgtacactgaaataaaggcgccactgaaggatgattcgtatattagt
ttaattgataatttacatccaacacctgctttaggtggctatccaaaagaatttgcaatg
gattttattgagcagaaagaatttggtacgcgaggattatatggtgcaccggttggctat
atagatatatacgatgattgtgaatttattgttgcaattcgttcgatgcttattaagaaa
gcacaagcaactttatttgctgggtgtggcattgttaaagattctgatccagatagtgaa
ttggcagaaacgaaccttaagttcacacctatgatgaatgcattaggagtcgatatgaat
gggaaatcataa


  DNA with Flanking Sequence

>fig|553590.4.peg.86 Isochorismate synthase (EC 5.4.4.2) @ Menaquinone-specific isochorismate synthase (EC 5.4.4.2)
acatggcaatgaataggctgattttaatatgatcttcgctaccaagaaaatatattttag
atgctgctgtaccaactaaaacgggtactacggaagcagttaatgtatgaggacgcatta
aatgccaatatttcttaactgtagaatattgctgatattgattactcattgaatacaaaa
cctctttaaatcatattttttataacaaagatattttaatagaaagtagcataaaggtca
attgacgtgaaaaattgcaagataagtttaagcaattcttgtaacacaattatccaaaaa
tgatacaatataataatgagtgaaaaaagacgaagaaagaagtgaaatggatggctacgg
gcgtattagaggacgatattgtcaaagagatatatggcagctcaaaggaatgggtttcag
ttgaagtgaaattatcacagtcactagacccgagcacattatttcatctcactgacaatg
aggcaggagatcgcttttatatgcgtttgaatgataatcgaacgtcatattttggctaca
aagcaattcaattattcaaaaataattctaaaaataaacaatctatttttaaagactggg
aaaaattaaaacataacatcacatttatacatccgcaatctgagaaacatcatcttcgag
ttgttggagggttccaattttcaagtcataaatcagatgatgaatggcgagagtttggac
taaatcattttgtattacctgaagttttaatttcaactgataataatgggacatttttaa
cttatacagttaaaagggaaagttttactgttgaggcattgaacgatttaatggatttgt
tcaacaatatatcggacatagatgtggacgagcaaattgggggaattactagaaatgaag
atatttataaagatgactggcgtcaacttgtagtagaagctatagaatctattaataatg
aagaaaaaattgtactagcacgtagacggttaataaagttcgataaagatatcagtattc
catatattctaaagcaagcatattctaaagaaaaaaacagttatatattcttgttagaat
cacaagattctatattcttttcacaaacacctgaacaattaataaaggtcaataataaaa
tactatcgactaaagctgtagcaggtacaattaaacgttcacaagatgaggacgaagata
caaaaaatgttgaagcatttttaaaagataataaaaacttaatcgaacatcgatttgttg
ttgacagtattttacatgatattaaaccttatatcactgaattacattatgataagacgc
ctaaaattctaaaaaatgatcatttatatcacttgtacactgaaataaaggcgccactga
aggatgattcgtatattagtttaattgataatttacatccaacacctgctttaggtggct
atccaaaagaatttgcaatggattttattgagcagaaagaatttggtacgcgaggattat
atggtgcaccggttggctatatagatatatacgatgattgtgaatttattgttgcaattc
gttcgatgcttattaagaaagcacaagcaactttatttgctgggtgtggcattgttaaag
attctgatccagatagtgaattggcagaaacgaaccttaagttcacacctatgatgaatg
cattaggagtcgatatgaatgggaaatcataaagcagctttaacgaagcaagtttttaca
tttgcatctgagttatatgcgtacggcgtaagggaagtagttatcagtccgggatcacgc
tcaacgccacttgcacttgcatttgaagcacatccaaatattaaaacatggatacacccc
gatgagcgaagtgcagcgttttttgcagttgggttaattaaaggcagtgaaagacctgtc
gctatattatgtacgtcaggtacagcagcagcgaattatacgcctgcaattgctgaaagc
caaattagtagaattcctttaatcgttttaacaagtgaccgtccgcatgaattaagaagt
gtaggcgcaccacaagcgattaatcaagtaaatatgtttaataattatgtaagttatgag
ttcgatatgcctattgcggatgatagtaaagagaccattgatgcaatttactatcaaatg
caaattgctagtcaatatttatatggaccacataaagggccaattcatttta


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
GO:0008909       F:isochorismate synthase activity
GO:0009058       P:biosynthetic process
cmr|SAUSA300_0945 Staphylococcus aureus subsp. aureus USA300-FPR3757     isochorismate synthase family protein
fig|367830.3.peg.1689 Staphylococcus aureus subsp. aureus USA300 FIG   Isochorismate synthase (EC 5.4.4.2) @ Menaquinone-specific isochorismate synthase (EC 5.4.4.2)
fig|451515.3.peg.1038 Staphylococcus aureus subsp. aureus USA300_FPR3757 FIG   Isochorismate synthase (EC 5.4.4.2) @ Menaquinone-specific isochorismate synthase (EC 5.4.4.2)
fig|451516.9.peg.1042 Staphylococcus aureus subsp. aureus USA300_TCH1516 FIG   Isochorismate synthase (EC 5.4.4.2) @ Menaquinone-specific isochorismate synthase (EC 5.4.4.2)
gb|ABD22173.1 Staphylococcus aureus subsp. aureus USA300_FPR3757     isochorismate synthase family protein
gi|87127659 Staphylococcus aureus subsp. aureus USA300_FPR3757 NCBI   isochorismate synthase family protein
gi|87161685 Staphylococcus aureus subsp. aureus USA300_FPR3757 NCBI   isochorismate synthase family protein
img|637887597 Staphylococcus aureus aureus USA300 IMG   isochorismate synthase family protein( EC:5.4.4.2,EC:5.4.99.6 )
kegg|saa:SAUSA300_0945 Staphylococcus aureus subsp. aureus USA300_FPR3757 KEGG   isochorismate synthase family protein
ref|YP_493643.1 Staphylococcus aureus subsp. aureus USA300_FPR3757 RefSeq   isochorismate synthase family protein
tr|Q2FI35 Staphylococcus aureus (strain USA300) TrEMBL   Isochorismate synthase family protein


  Links to Related Entries in Other Sites

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  Functional Coupling

Score Peg Function
13 fig|553590.4.peg.85 1,4-dihydroxy-2-naphthoate polyprenyltransferase (EC 2.5.1.74)
23 fig|553590.4.peg.87 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
16 fig|553590.4.peg.88 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
10 fig|553590.4.peg.89 Naphthoate synthase (EC 4.1.3.36)


  Attributes

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  Protein Families

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