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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|536232.3.peg.2434: Clostridium botulinum A2 str. Kyoto

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NCBI Taxonomy Id: 536232

Current Assignment: Phage antirepressor protein
Translate Function Assignments


Context on contig NC_012563 from base 2602156 to 2614307 (12152 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2421 2603034 2602156 879 -           Phage protein locus|CLM_2560, protein_id|YP_002804714.1, gi|226949623, geneID|7767698
2422 2603285 2603046 240 - 11         FIG00520478: hypothetical protein locus|CLM_2561, protein_id|YP_002804715.1, gi|226949624, geneID|7767479
2423 2604105 2603302 804 - 16     1: 1   Helicase loader DnaI locus|CLM_2562, protein_id|YP_002804716.1, gi|226949625, geneID|7766929
2424 2604937 2604065 873 - -41         Phage replication initiation locus|CLM_2563, protein_id|YP_002804717.1, gi|226949626, geneID|7765296
2425 2605259 2604960 300 - 22         FIG00520978: hypothetical protein locus|CLM_2564, protein_id|YP_002804718.1, gi|226949627, geneID|7764742
2426 2605529 2605353 177 - 93         FIG00533413: hypothetical protein locus|CLM_2565, protein_id|YP_002804719.1, gi|226949628, geneID|7768104
2427 2605691 2605545 147 - 15         FIG00516092: hypothetical protein locus|CLM_2566, protein_id|YP_002804720.1, gi|226949629, geneID|7765553
2428 2606554 2605694 861 - 2         FIG00518854: hypothetical protein locus|CLM_2567, protein_id|YP_002804721.1, gi|226949630, geneID|7765878
2429 2607051 2606566 486 - 11         FIG00523380: hypothetical protein locus|CLM_2568, protein_id|YP_002804722.1, gi|226949631, geneID|7767488
2430 2607347 2607183 165 - 131         FIG00523113: hypothetical protein locus|CLM_2569, protein_id|YP_002804723.1, gi|226949632, geneID|7766197
2431 2607514 2607356 159 - 8         hypothetical protein locus|CLM_2570, protein_id|YP_002804724.1, gi|226949633, geneID|7765683
2432 2607719 2607567 153 - 52         hypothetical protein locus|CLM_2571, protein_id|YP_002804725.1, gi|226949634, geneID|7764994
2433 2607949 2607740 210 - 20         hypothetical protein locus|CLM_2572, protein_id|YP_002804726.1, gi|226949635, geneID|7767183
2434 2608749 2607961 789 - 11         Phage antirepressor protein locus|CLM_2573, protein_id|YP_002804727.1, gi|226949636, geneID|7766092
2435 2609024 2608803 222 - 53         hypothetical protein locus|CLM_2574, protein_id|YP_002804728.1, gi|226949637, geneID|7765422
2436 2609157 2609615 459 + 132         transcriptional regulator, XRE family locus|CLM_2575, protein_id|YP_002804729.1, gi|226949638, geneID|7764357
2437 2609662 2610096 435 + 46         Phage repressor protein locus|CLM_2576, protein_id|YP_002804730.1, gi|226949639, geneID|7767058
2438 2610239 2611600 1362 + 142         Chromosome segregation ATPase locus|CLM_2577, protein_id|YP_002804731.1, gi|226949640, geneID|7765933
2439 2611695 2613317 1623 + 94         Site-specific recombinases, DNA invertase Pin homolog locus|CLM_2578, protein_id|YP_002804732.1, gi|226949641, geneID|7764557
2440 2613681 2614307 627 + 363         Electron transfer subunit protein locus|CLM_2579, protein_id|YP_002804733.1, gi|226949642, geneID|7767907

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|536232.3.peg.2434 Phage antirepressor protein
MSNLQIFKNQQLIALNQNKNGEVIISGRELHEFLEIGTQYTKWFERMKEYGFVENQDFAT
ISQKRLTAQGNETTYTDHAIKLDMAKELAMIQRNEKGKQARQYFIVVEKAWNSPEMIMKR
ALEIANRNVQNLKLENEEQKQQLKKQKPKVLFADAVSVAHTSILVGDLAKLIKQNGIDIG
AKRLFAWLRENGYLIRRKGTDYNMPTQYSMDLGLFEVKETSITHSDGHISISKTPKITGK
GQIYFINKFVEKQTKSEIACTK

MD5 = 65fbe2da80ded8cb9f328fb27eeb4ea0


  DNA Sequence

>fig|536232.3.peg.2434 Phage antirepressor protein
gtgagtaacttacagatttttaaaaatcaacaacttatagcacttaatcaaaataaaaat
ggagaagtgataataagtggtagagaattacatgagtttttagaaataggaactcaatat
acaaagtggttcgaaagaatgaaagaatatggttttgttgaaaatcaggactttgcaact
attagtcaaaaaagactaacagctcaaggtaatgaaacgacttatacagatcatgccata
aaattagacatggcaaaagagcttgcaatgatacaaagaaatgaaaaaggaaagcaagca
agacagtattttatagtggtagagaaagcatggaatagccctgaaatgataatgaaaaga
gcgctagaaattgctaatagaaatgtacaaaatttaaaactagaaaatgaagaacaaaag
cagcagcttaaaaagcaaaaacccaaagtactatttgcagatgcagtatcagttgcacat
acatcaattctagtaggagatttagcaaaattaattaagcaaaatggtatagatatagga
gctaaaagattatttgcttggttaagggaaaacggatacttaattagaagaaaaggaaca
gattataatatgccaactcaatatagtatggacttaggattatttgaagttaaggaaaca
tctattacacattcagatgggcatataagtataagtaagactccaaaaattactgggaaa
ggccagatatattttataaataagtttgtagaaaaacaaactaaaagcgagatagcttgt
actaaatag


  DNA with Flanking Sequence

>fig|536232.3.peg.2434 Phage antirepressor protein
agaatgacttatacctattaatttagaagcatttcttaagcttaattttaattcttttct
tttatttattaaaaaagcctgtaaatcattcattttaacacctcctcaatactattgtaa
tgcaaacattacaaaattaaaatgaaattttaaaaatatatgtataacttgcttgacaat
atgtaatactagtattacaataataaatgtaaggaggtggacttcatgaagaacaaacta
aaaaaattacgacttcaattcggtttaacacaaggggaattagcacaaaaactcaaagta
gcaaggcctactatttctaatatagaaagagaaatatatactcctagtggttcgttgatg
atacgtatagctaatttttttggaaaaccagcagaacaaattttttttgaagatagtgta
atgcaggaagaacaaaagattatttaactatagtttatgtagttcttaaaaaattacttt
agtaaaagggaggatgtagggtgagtaacttacagatttttaaaaatcaacaacttatag
cacttaatcaaaataaaaatggagaagtgataataagtggtagagaattacatgagtttt
tagaaataggaactcaatatacaaagtggttcgaaagaatgaaagaatatggttttgttg
aaaatcaggactttgcaactattagtcaaaaaagactaacagctcaaggtaatgaaacga
cttatacagatcatgccataaaattagacatggcaaaagagcttgcaatgatacaaagaa
atgaaaaaggaaagcaagcaagacagtattttatagtggtagagaaagcatggaatagcc
ctgaaatgataatgaaaagagcgctagaaattgctaatagaaatgtacaaaatttaaaac
tagaaaatgaagaacaaaagcagcagcttaaaaagcaaaaacccaaagtactatttgcag
atgcagtatcagttgcacatacatcaattctagtaggagatttagcaaaattaattaagc
aaaatggtatagatataggagctaaaagattatttgcttggttaagggaaaacggatact
taattagaagaaaaggaacagattataatatgccaactcaatatagtatggacttaggat
tatttgaagttaaggaaacatctattacacattcagatgggcatataagtataagtaaga
ctccaaaaattactgggaaaggccagatatattttataaataagtttgtagaaaaacaaa
ctaaaagcgagatagcttgtactaaataggaggtaacagtatggaagatataaaggtaac
tgttacacaagagaaaagagaagaaacaatagataagatattagatcttgtagaaaaaga
atttaaaggtatagatgttacagcagtatttactaaaaagctgttagaggacactgtaag
aactttagaaaacagatgtatggaaacatcacttagatttataaataaaggggtaaatga
ggggcactaaaccaataggaggaaaatgaaatgttagaaaatatgaatgagtttagatgt
ccaaaatgccaaaaattgttatttaaatataaattaaaaggagaattaaatctagaaatt
aagtgcacaagatgtagaacatttactaatacagcactaaataaaaataactttaacaaa
taggtacgatttttcataagatgaataataactaagtaaagagaggaggagaactatggc
caaaattaaaaaaattatagtgaactatccagaagacccaaaagtaatg


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
GO:0003677       F:DNA binding
gb|ACO84611.1 Clostridium botulinum A2 str. Kyoto     phage antirepressor protein
gi|226841945 Clostridium botulinum A2 str. Kyoto NCBI   phage antirepressor protein
gi|226949636 Clostridium botulinum A2 str. Kyoto NCBI   phage antirepressor protein
kegg|cby:CLM_2573 Clostridium botulinum A2 Kyoto KEGG   phage antirepressor protein
ref|YP_002804727.1 Clostridium botulinum A2 str. Kyoto RefSeq   phage antirepressor protein
tr|C1FRD9 Clostridium botulinum (strain Kyoto / Type A2) TrEMBL   Phage antirepressor protein


  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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