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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|526218.6.peg.1352: Sebaldella termitidis ATCC 33386

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NCBI Taxonomy Id: 526218

Current Assignment: Phage antirepressor protein
Translate Function Assignments


Context on contig NC_013517 from base 1411651 to 1422832 (11182 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
1346 1411651 1412295 645 +           Helix-turn-helix motif locus|Sterm_1316, protein_id|YP_003308113.1, gi|269119936, InterPro:IPR001387, geneID|8596793
1347 1412314 1412721 408 + 18         hypothetical protein locus|Sterm_1317, protein_id|YP_003308114.1, gi|269119937, InterPro:IPR001440, InterPro:IPR013026, geneID|8596794
1348 1412744 1414306 1563 + 22         TPR domain protein locus|Sterm_1318, protein_id|YP_003308115.1, gi|269119938, InterPro:IPR001440, InterPro:IPR006597, InterPro:IPR013026, InterPro:IPR013105, geneID|8596795
1349 1414401 1414565 165 + 94         hypothetical protein locus|Sterm_1319, protein_id|YP_003308116.1, gi|269119939, geneID|8596796
1350 1414526 1414987 462 + -40         hypothetical protein locus|Sterm_1320, protein_id|YP_003308117.1, gi|269119940, geneID|8596797
1351 1416681 1416136 546 - 1148         TPR domain protein locus|Sterm_1321, protein_id|YP_003308118.1, gi|269119941, InterPro:IPR001440, InterPro:IPR006597, InterPro:IPR011716, InterPro:IPR013026, geneID|8596798
1352 1417489 1416779 711 - 97         Phage antirepressor protein locus|Sterm_1322, protein_id|YP_003308119.1, gi|269119942, InterPro:IPR003497, geneID|8596799
1353 1418465 1417974 492 - 484         hypothetical protein locus|Sterm_1324, protein_id|YP_003308121.1, gi|269119944, geneID|8596801
1354 1418855 1418565 291 - 99         hypothetical protein locus|Sterm_1325, protein_id|YP_003308122.1, gi|269119945, geneID|8596802
1355 1419169 1418873 297 - 17         hypothetical protein locus|Sterm_1326, protein_id|YP_003308123.1, gi|269119946, InterPro:IPR002048, geneID|8596803
1356 1419915 1419265 651 - 95         hypothetical protein locus|Sterm_1327, protein_id|YP_003308124.1, gi|269119947, geneID|8596804
1357 1420482 1419916 567 - 0         hypothetical protein locus|Sterm_1328, protein_id|YP_003308125.1, gi|269119948, geneID|8596805
1358 1420586 1420948 363 + 103     4: 2 4 6 1   Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake  
1359 1421255 1422157 903 + 306     2: 5 3   Oxidoreductase, aldo/keto reductase family locus|Sterm_1330, protein_id|YP_003308126.1, gi|269119949, InterPro:IPR001395, geneID|8599616
1360 1422356 1422832 477 + 198         Auxin-binding protein, putative locus|Sterm_1331, protein_id|YP_003308127.1, gi|269119950, InterPro:IPR006045, InterPro:IPR013096, geneID|8596807

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|526218.6.peg.1352 Phage antirepressor protein
MDKLQIFQSKEFGKVRTVLIENEVWFVLIDICKILELSNPSSVIKRLDEDEVTKFDLGSL
SGITNIINESGLYKVIFRSDKPQANQFTKWVTHDVLPSLRKTGSYSINQTPKELELKEKE
IQLKTAEFLNNMADSILIPEYKQILNAHATKVLTGDFLLPLPVVGEITYSATEIGKMLNI
SANMVGRLTKKHNLRTEEYGKVFYDKSKYSSKEVETFRYYIKVIDILKNIVSTLSA

MD5 = 6b5a8584d7dc4adfbebae2d8bde4ed97


  DNA Sequence

>fig|526218.6.peg.1352 Phage antirepressor protein
atggataaacttcaaatatttcaaagtaaagaatttggaaaagtaagaactgtattgata
gaaaatgaagtctggtttgtattaattgatatatgtaagatattagaactttcaaatcca
agtagtgtgatcaaaagattagatgaggacgaggtgactaagtttgacttagggagctta
tcagggattaccaatatcattaatgaaagcggattatataaagtaatttttagaagtgac
aaacctcaagctaatcaatttactaaatgggtaacccatgatgtattaccttcactaaga
aaaactggcagctactcaataaaccaaacaccaaaagaacttgaactaaaagaaaaagaa
atccaacttaaaactgctgaatttcttaataatatggctgacagtattctgattcctgaa
tacaagcagatacttaatgctcatgctactaaggtactaaccggggattttctacttcca
ttacctgttgttggtgaaataacctatagtgctactgaaattggcaaaatgcttaatatc
tcagctaatatggttggaagattaactaaaaagcataatctccgtactgaagaatatgga
aaagtcttttatgacaagtctaagtattccagtaaggaagttgagactttcaggtattat
attaaggttattgatattttaaagaatattgttagcactctatccgcataa


  DNA with Flanking Sequence

>fig|526218.6.peg.1352 Phage antirepressor protein
atttactataacttgaggccatttcatggtctctttttttcaaaaaatacgtaaatacat
ttgacaaaaaagtaaatatgttatatattattattagaaataaaaatagccaactgttga
agcagctgactattataaaggatacttgttataagtacccccgaatatgtacattataac
aaatatcctaaaaaaatacaattttttaggaggaatcactatgaatcaaaacattaaaga
atttatgatctctcacattgaagagatgtatgattacggtcatttaaaagacgacctgtc
taaaatggaagataacttttataacttaattgaaaacatcaattctaaaactacatgtac
taaaaatgacatccaacagcttattaacacttttgaaactgtattattaaccgcaaagaa
aacctattttgaacacggagctacttctggaatatctaatatcaacaaaatgtatttaac
tccaaatgaggtggtacttcatggataaacttcaaatatttcaaagtaaagaatttggaa
aagtaagaactgtattgatagaaaatgaagtctggtttgtattaattgatatatgtaaga
tattagaactttcaaatccaagtagtgtgatcaaaagattagatgaggacgaggtgacta
agtttgacttagggagcttatcagggattaccaatatcattaatgaaagcggattatata
aagtaatttttagaagtgacaaacctcaagctaatcaatttactaaatgggtaacccatg
atgtattaccttcactaagaaaaactggcagctactcaataaaccaaacaccaaaagaac
ttgaactaaaagaaaaagaaatccaacttaaaactgctgaatttcttaataatatggctg
acagtattctgattcctgaatacaagcagatacttaatgctcatgctactaaggtactaa
ccggggattttctacttccattacctgttgttggtgaaataacctatagtgctactgaaa
ttggcaaaatgcttaatatctcagctaatatggttggaagattaactaaaaagcataatc
tccgtactgaagaatatggaaaagtcttttatgacaagtctaagtattccagtaaggaag
ttgagactttcaggtattatattaaggttattgatattttaaagaatattgttagcactc
tatccgcataaagaaaaatctctatataaaaatttttataaattatttgtttgatttttt
ataatttagctgttacaatttttcatatcttaactactggaggaactaatgattaaaaaa
atattcgttactttcattatctttggtgtattttattcttgctctccttcaaatcctgaa
ccaactgtaggaactgaagaatattatcttgaaaaaataaaaattgaagatcgagaatct
atgtttcaattaggtcttttatatcaagaacaaggaaaattcgaacttgctgaaaaatac
tatcttatggctagcgaacatagtgactctaatgctatgaacaatttaggaaatctatat
aaaaaacaagagaaatttgaacttgcagaaaggctctttctcatggccattaaatacgat
aataaattagccttatataatttaggacttttatatcatgatcaagaaaaattcaaactt
gctgaaaaatactatcttatggctattgaaa


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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