The SEED: an Annotation/Analysis Tool Provided by FIG
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Fid | Start | End | Size (nt) |
Gap | Find best clusters |
Pins | Fc-sc | SS | Ev | Function | Aliases | |
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1343 | 1409638 | 1410012 | 375 | + | ![]() |
hypothetical protein | locus|Sterm_1313, protein_id|YP_003308110.1, gi|269119933, geneID|8596790 | |||||
1344 | 1410614 | 1410438 | 177 | - | 425 | ![]() |
hypothetical protein | locus|Sterm_1314, protein_id|YP_003308111.1, gi|269119934, geneID|8596791 | ||||
1345 | 1411254 | 1411610 | 357 | + | 639 | ![]() |
hypothetical protein | locus|Sterm_1315, protein_id|YP_003308112.1, gi|269119935, geneID|8596792 | ||||
1346 | 1411651 | 1412295 | 645 | + | 40 | ![]() |
Prophage ps3 protein 01, N-terminal DNA-binding domain / Prophage ps3 protein 01, C-terminal domain | locus|Sterm_1316, protein_id|YP_003308113.1, gi|269119936, InterPro:IPR001387, geneID|8596793 | ||||
1347 | 1412314 | 1412721 | 408 | + | 18 | ![]() |
hypothetical protein | locus|Sterm_1317, protein_id|YP_003308114.1, gi|269119937, InterPro:IPR001440, InterPro:IPR013026, geneID|8596794 | ||||
1348 | 1412744 | 1414306 | 1563 | + | 22 | ![]() |
TPR domain protein | locus|Sterm_1318, protein_id|YP_003308115.1, gi|269119938, InterPro:IPR001440, InterPro:IPR006597, InterPro:IPR013026, InterPro:IPR013105, geneID|8596795 | ||||
1349 | 1414401 | 1414565 | 165 | + | 94 | ![]() |
hypothetical protein | locus|Sterm_1319, protein_id|YP_003308116.1, gi|269119939, geneID|8596796 | ||||
1350 | 1414526 | 1414987 | 462 | + | -40 | ![]() |
hypothetical protein | locus|Sterm_1320, protein_id|YP_003308117.1, gi|269119940, geneID|8596797 | ||||
1351 | 1416681 | 1416136 | 546 | - | 1148 | ![]() |
TPR domain protein | locus|Sterm_1321, protein_id|YP_003308118.1, gi|269119941, InterPro:IPR001440, InterPro:IPR006597, InterPro:IPR011716, InterPro:IPR013026, geneID|8596798 | ||||
1352 | 1417489 | 1416779 | 711 | - | 97 | ![]() |
Phage antirepressor protein | locus|Sterm_1322, protein_id|YP_003308119.1, gi|269119942, InterPro:IPR003497, geneID|8596799 | ||||
1353 | 1418465 | 1417974 | 492 | - | 484 | ![]() |
hypothetical protein | locus|Sterm_1324, protein_id|YP_003308121.1, gi|269119944, geneID|8596801 | ||||
1354 | 1418855 | 1418565 | 291 | - | 99 | ![]() |
hypothetical protein | locus|Sterm_1325, protein_id|YP_003308122.1, gi|269119945, geneID|8596802 | ||||
1355 | 1419169 | 1418873 | 297 | - | 17 | ![]() |
hypothetical protein | locus|Sterm_1326, protein_id|YP_003308123.1, gi|269119946, InterPro:IPR002048, geneID|8596803 | ||||
1356 | 1419915 | 1419265 | 651 | - | 95 | ![]() |
hypothetical protein | locus|Sterm_1327, protein_id|YP_003308124.1, gi|269119947, geneID|8596804 | ||||
1357 | 1420482 | 1419916 | 567 | - | 0 | ![]() |
hypothetical protein | locus|Sterm_1328, protein_id|YP_003308125.1, gi|269119948, geneID|8596805 |
Annotation History / View All Related Annotations | Help on Annotations |
Score | Peg | Function |
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Key Link Explains Key |
Value |
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| Psi-Blast | TMpred | TMHMM | Gram negative PSORT | Gram negative SignalP | Gram positive PSORT | Gram positive SignalP | LipoP | Radar | PPSearch | Gram negative CELLO | Gram positive CELLO | ProDom | PDB | RNAFold |
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