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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|526218.6.peg.1348: Sebaldella termitidis ATCC 33386

This feature in The SEED Viewer

NCBI Taxonomy Id: 526218

Current Assignment: TPR domain protein
Translate Function Assignments



Context on contig NC_013517 from base 1406715 to 1419915 (13201 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1341 1406715 1408241 1527 +       1: 1   hypothetical protein locus|Sterm_1311, protein_id|YP_003308108.1, gi|269119931, geneID|8596788
1342 1408241 1409296 1056 + -1     1: 1   hypothetical protein locus|Sterm_1312, protein_id|YP_003308109.1, gi|269119932, geneID|8596789
1343 1409638 1410012 375 + 341     1: 1   hypothetical protein locus|Sterm_1313, protein_id|YP_003308110.1, gi|269119933, geneID|8596790
1344 1410614 1410438 177 - 425     1: 1   hypothetical protein locus|Sterm_1314, protein_id|YP_003308111.1, gi|269119934, geneID|8596791
1345 1411254 1411610 357 + 639     1: 1   hypothetical protein locus|Sterm_1315, protein_id|YP_003308112.1, gi|269119935, geneID|8596792
1346 1411651 1412295 645 + 40         Helix-turn-helix motif locus|Sterm_1316, protein_id|YP_003308113.1, gi|269119936, InterPro:IPR001387, geneID|8596793
1347 1412314 1412721 408 + 18     1: 1   hypothetical protein locus|Sterm_1317, protein_id|YP_003308114.1, gi|269119937, InterPro:IPR001440, InterPro:IPR013026, geneID|8596794
1348 1412744 1414306 1563 + 22         TPR domain protein locus|Sterm_1318, protein_id|YP_003308115.1, gi|269119938, InterPro:IPR001440, InterPro:IPR006597, InterPro:IPR013026, InterPro:IPR013105, geneID|8596795
1349 1414401 1414565 165 + 94     1: 1   hypothetical protein locus|Sterm_1319, protein_id|YP_003308116.1, gi|269119939, geneID|8596796
1350 1414526 1414987 462 + -40     1: 1   hypothetical protein locus|Sterm_1320, protein_id|YP_003308117.1, gi|269119940, geneID|8596797
1351 1416681 1416136 546 - 1148         TPR domain protein locus|Sterm_1321, protein_id|YP_003308118.1, gi|269119941, InterPro:IPR001440, InterPro:IPR006597, InterPro:IPR011716, InterPro:IPR013026, geneID|8596798
1352 1417489 1416779 711 - 97         Phage antirepressor protein locus|Sterm_1322, protein_id|YP_003308119.1, gi|269119942, InterPro:IPR003497, geneID|8596799
1353 1418465 1417974 492 - 484     1: 1   hypothetical protein locus|Sterm_1324, protein_id|YP_003308121.1, gi|269119944, geneID|8596801
1354 1418855 1418565 291 - 99     1: 1   hypothetical protein locus|Sterm_1325, protein_id|YP_003308122.1, gi|269119945, geneID|8596802
1355 1419169 1418873 297 - 17     1: 1   hypothetical protein locus|Sterm_1326, protein_id|YP_003308123.1, gi|269119946, InterPro:IPR002048, geneID|8596803
1356 1419915 1419265 651 - 95     1: 1   hypothetical protein locus|Sterm_1327, protein_id|YP_003308124.1, gi|269119947, geneID|8596804

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|526218.6.peg.1348 TPR domain protein
MKENLSDIYNQLGITYSEMQEYDKAIKNLDKAIEINPDNSLAYNNLGFIYSEQKDFENAI
SKYKIAIEKGNTIAYNNLGTIYLSQERYKEAEDSYKKALISFKDNSMILYNLGIFYFEQE
QYDEAIKFYEKSLEIQDDEATRFHLGLVFSLTNQYEKAKNNYEKVTKNPRFSFPYLNEIY
LQMIKNIKELDSEILVRIILMMYFTDEILKRCHIKIDNIAHYTSINVFSKILEGKKNEED
EKIKEKFLRMGISHLCNDPTEGHLLYNYLELPIERLIEQYLCFLTCFSLDTDSLNQFRLY
GKENGREATGVAIVLNSSFFSKDFNNLDYFCEKSSSKIKFEETNKIIKTEHRSLYRCIYF
GFDNKNKERIYCKLAKRSEWSEFNEIHKSQEDYDNLEKLEKEIENSIKKIMEHNNMLVET
KMTKVTNLIPEILMPLRYLIKDPAYEEERECRIIKILKFGNEEIIEDNELKRIYSEYKVN
IEDHIAYINIHQRQELYTTFFQNKLKDRNKVKISKNPFNG

MD5 = b4320b47ad765b7250bc7b28b52c3797


  DNA Sequence

>fig|526218.6.peg.1348 TPR domain protein
atgaaagagaatttatctgatatatataatcagttaggaattacttattcagaaatgcaa
gaatatgataaagctattaaaaatttagataaagcgatagaaataaatcctgataatagc
ttagcatataataatttaggatttatttattcagaacaaaaagattttgaaaatgcaata
tctaaatataagatagctatagaaaaagggaatacaatagcatataataacttaggtaca
atttatttatcacaagaaagatataaagaagcagaggacagttataaaaaggctctaatt
tccttcaaagataatagtatgatactttataatttaggaatattttattttgaacaagaa
caatatgatgaagcaataaaattttatgaaaagtcattagaaatacaggatgatgaagca
acaagatttcatttaggtttagttttttctttgaccaatcaatatgaaaaagcaaaaaat
aattatgagaaagtaactaaaaatcctcgtttttcttttccatatctaaatgaaatatat
cttcaaatgataaaaaatataaaagaattagacagtgaaatactggtaagaattatcttg
atgatgtattttacggatgaaattctaaaaagatgccatataaaaattgataatattgca
cattatacatcaataaatgtttttagtaagattttagaggggaaaaaaaatgaagaagat
gaaaaaataaaagaaaaatttttaagaatgggaatctctcatctttgtaatgatccaaca
gaaggtcatcttttatataattatttagaattaccaattgaaagattaatagaacaatat
ctttgttttttaacatgcttttctttagatactgactctctaaatcaattcagattatat
ggtaaagaaaatgggagagaagcaacaggagttgcaatagtgctaaatagttcttttttt
agtaaggattttaataatcttgattatttttgtgaaaaatcaagttctaaaataaagttt
gaagaaacaaacaaaattattaagactgaacatagatcattatatcggtgtatatatttt
ggatttgataataaaaataaagagcgtatatattgtaaattggctaaaagaagtgaatgg
tcagaatttaatgaaatacataaaagccaagaagattatgataatctagaaaagttagaa
aaagagatagaaaattcaataaaaaaaataatggagcataataatatgttagtagaaact
aaaatgactaaagtaacgaatcttattcctgaaattttaatgcctttaaggtacttaatt
aaagatccggcatatgaagaagaaagagagtgtaggattataaaaatactaaaatttgga
aatgaagaaataatagaagataatgaattaaaaagaatctacagcgaatataaagtaaat
atagaagatcatattgcttacataaacatacatcaaaggcaagaactatatacgacattt
tttcaaaataaattaaaagatagaaataaagtaaaaatatcaaagaatcctttcaatggc
taa


  DNA with Flanking Sequence

>fig|526218.6.peg.1348 TPR domain protein
aattggagaaaatgaaaaaagtgaaattttaaaaagccgattttataagtaaagaaaggg
ttagaaaataatgagcgatgtgaatcttaagaaaaatattgttgaagaaatagatgaaat
ggtaaaaaaaataaaagaagctcgtgaaaataatgaagaatataaaagtagagtagaaaa
tttagtactctactccttagataatggagaataccaaaaagtaacagatgcgattgagtc
attaggactgtcaagtgaaggggattctagtttatataataacttgggtgtattatatat
aaggcaaaatttgtatgagaagtcgatagaaaattttgaaaagtcaatagagatgggaaa
taaaaatattggtgtttatatcaatttaagtagagtttatttggaagagaagaagttcaa
tgatgcaatagaaacattggaaaaagctaaaaatatttatgaaaataaaagaaactaaag
agcaaattttattaaaagaaatgaaagagaatttatctgatatatataatcagttaggaa
ttacttattcagaaatgcaagaatatgataaagctattaaaaatttagataaagcgatag
aaataaatcctgataatagcttagcatataataatttaggatttatttattcagaacaaa
aagattttgaaaatgcaatatctaaatataagatagctatagaaaaagggaatacaatag
catataataacttaggtacaatttatttatcacaagaaagatataaagaagcagaggaca
gttataaaaaggctctaatttccttcaaagataatagtatgatactttataatttaggaa
tattttattttgaacaagaacaatatgatgaagcaataaaattttatgaaaagtcattag
aaatacaggatgatgaagcaacaagatttcatttaggtttagttttttctttgaccaatc
aatatgaaaaagcaaaaaataattatgagaaagtaactaaaaatcctcgtttttcttttc
catatctaaatgaaatatatcttcaaatgataaaaaatataaaagaattagacagtgaaa
tactggtaagaattatcttgatgatgtattttacggatgaaattctaaaaagatgccata
taaaaattgataatattgcacattatacatcaataaatgtttttagtaagattttagagg
ggaaaaaaaatgaagaagatgaaaaaataaaagaaaaatttttaagaatgggaatctctc
atctttgtaatgatccaacagaaggtcatcttttatataattatttagaattaccaattg
aaagattaatagaacaatatctttgttttttaacatgcttttctttagatactgactctc
taaatcaattcagattatatggtaaagaaaatgggagagaagcaacaggagttgcaatag
tgctaaatagttctttttttagtaaggattttaataatcttgattatttttgtgaaaaat
caagttctaaaataaagtttgaagaaacaaacaaaattattaagactgaacatagatcat
tatatcggtgtatatattttggatttgataataaaaataaagagcgtatatattgtaaat
tggctaaaagaagtgaatggtcagaatttaatgaaatacataaaagccaagaagattatg
ataatctagaaaagttagaaaaagagatagaaaattcaataaaaaaaataatggagcata
ataatatgttagtagaaactaaaatgactaaagtaacgaatcttattcctgaaattttaa
tgcctttaaggtacttaattaaagatccggcatatgaagaagaaagagagtgtaggatta
taaaaatactaaaatttggaaatgaagaaataatagaagataatgaattaaaaagaatct
acagcgaatataaagtaaatatagaagatcatattgcttacataaacatacatcaaaggc
aagaactatatacgacattttttcaaaataaattaaaagatagaaataaagtaaaaatat
caaagaatcctttcaatggctaatgtaaatgattgtaaataatatgttaaaatggtggag
ttacctcaaagaagtatacctgaagttaagatagtgagaaaaaattgaggaaggttcatg
gtggaaaaaatattaattatattgattttatgtttagggacgttgggctgtgatgcaatg
cttagtgaagctgacaagcagttaaaagtaatagagaaattagaaaaaatattccagaag
agttggaaaataaccgacaagctattattggatattgtttagaattgggaactgtagtcc
ctgatgtgatagattcgagttgcacaatggtaaaaacaagtggagctgataagcagttag
aatttttaaataaaaatgctcagttaataaaagcaaaaagtgtgagtgaagctgtagaag
tattacaagcggagtataatgcaatggaaaaggaagttatattttttgatgggatagaaa
cgataaaatttgtagtagataaagcgaacttaataccagttgt


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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