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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|526218.6.peg.1346: Sebaldella termitidis ATCC 33386

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NCBI Taxonomy Id: 526218

Current Assignment: Prophage ps3 protein 01, N-terminal DNA-binding domain / Prophage ps3 protein 01, C-terminal domain
Translate Function Assignments


Context on contig NC_013517 from base 1406715 to 1417489 (10775 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
1341 1406715 1408241 1527 +           hypothetical protein locus|Sterm_1311, protein_id|YP_003308108.1, gi|269119931, geneID|8596788
1342 1408241 1409296 1056 + -1         hypothetical protein locus|Sterm_1312, protein_id|YP_003308109.1, gi|269119932, geneID|8596789
1343 1409638 1410012 375 + 341         hypothetical protein locus|Sterm_1313, protein_id|YP_003308110.1, gi|269119933, geneID|8596790
1344 1410614 1410438 177 - 425         hypothetical protein locus|Sterm_1314, protein_id|YP_003308111.1, gi|269119934, geneID|8596791
1345 1411254 1411610 357 + 639         hypothetical protein locus|Sterm_1315, protein_id|YP_003308112.1, gi|269119935, geneID|8596792
1346 1411651 1412295 645 + 40         Prophage ps3 protein 01, N-terminal DNA-binding domain / Prophage ps3 protein 01, C-terminal domain locus|Sterm_1316, protein_id|YP_003308113.1, gi|269119936, InterPro:IPR001387, geneID|8596793
1347 1412314 1412721 408 + 18         hypothetical protein locus|Sterm_1317, protein_id|YP_003308114.1, gi|269119937, InterPro:IPR001440, InterPro:IPR013026, geneID|8596794
1348 1412744 1414306 1563 + 22         TPR domain protein locus|Sterm_1318, protein_id|YP_003308115.1, gi|269119938, InterPro:IPR001440, InterPro:IPR006597, InterPro:IPR013026, InterPro:IPR013105, geneID|8596795
1349 1414401 1414565 165 + 94         hypothetical protein locus|Sterm_1319, protein_id|YP_003308116.1, gi|269119939, geneID|8596796
1350 1414526 1414987 462 + -40         hypothetical protein locus|Sterm_1320, protein_id|YP_003308117.1, gi|269119940, geneID|8596797
1351 1416681 1416136 546 - 1148         TPR domain protein locus|Sterm_1321, protein_id|YP_003308118.1, gi|269119941, InterPro:IPR001440, InterPro:IPR006597, InterPro:IPR011716, InterPro:IPR013026, geneID|8596798
1352 1417489 1416779 711 - 97         Phage antirepressor protein locus|Sterm_1322, protein_id|YP_003308119.1, gi|269119942, InterPro:IPR003497, geneID|8596799

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|526218.6.peg.1346 Prophage ps3 protein 01, N-terminal DNA-binding domain / Prophage ps3 protein 01, C-terminal domain
MQIEKIVSKKKTYKVKNLDITFIEQTKINIETGEEIFDSKLEKENGIRVTDEYKNQVGLL
TSNELKKIRNKYKISQIEFALLLDLGEKNITRYENGMIQNKSIDSLIRLMKNNMNFLTLL
VENKNNFSNERYYELLRNITLKILQENLTQNIMIDSRKNIPVRSRVVAAPFSPRKAKNRN
RRIKENGMIQVSKIGNRKIGENEKSEILKSRFYK

MD5 = c80044a6bda9a0a08837bd55c9eb4c88


  DNA Sequence

>fig|526218.6.peg.1346 Prophage ps3 protein 01, N-terminal DNA-binding domain / Prophage ps3 protein 01, C-terminal domain
atgcaaattgaaaaaatagtatcaaaaaagaaaacatataaagttaagaatttagatatt
acatttattgaacaaactaaaattaatattgaaactggggaagaaatatttgattcaaaa
ttagagaaagagaatggaataagagtaacagatgaatataaaaatcaagttggtcttctc
acatcaaatgaattaaaaaaaataagaaataagtataaaattagtcaaattgaatttgct
ttattactggatttaggagaaaaaaatataacaagatatgaaaatggaatgatacaaaat
aaatcaattgattcattgattagattaatgaaaaataatatgaattttttaacattatta
gtagaaaataagaataatttttctaatgaacgatattatgaattattaagaaatataact
ttaaaaattttacaagagaatttgacacaaaatattatgatagattcaaggaaaaatata
ccagttcgttctagagtggtggctgctccttttagtcctagaaaagcaaaaaatagaaat
agaagaataaaggaaaatggaatgattcaagtttctaagattgggaatagaaaaattgga
gaaaatgaaaaaagtgaaattttaaaaagccgattttataagtaa


  DNA with Flanking Sequence

>fig|526218.6.peg.1346 Prophage ps3 protein 01, N-terminal DNA-binding domain / Prophage ps3 protein 01, C-terminal domain
actatttttttagacagtaaggtatagcttgataaaaaataaaaaaaatgttatgatatt
tataatattaaaagtatcatttgatactccaatggagggaactatgtctgaaacaatagt
tagtttattagaaacagtaagaggatatatagtaaatggagagtatgattttctggtata
tagagagaaaaataaaaaaactttagaagattatggaataacagctgaatttttagttag
taacatctttgatgaattggagccaggtgatttattcagaggaccaattcctgataaaga
tccaaataaacaagatggagatgtttatatatttatgaaggatataaattgtataattcc
agaaattagcaagaaattttatataaaatttaaaattgtagaagaaaataacaagaaatt
aataatattgtcattacatgaggaaggaatgtttgaatgattttaaaagggttatagaag
ataaattatggaggatatttatgcaaattgaaaaaatagtatcaaaaaagaaaacatata
aagttaagaatttagatattacatttattgaacaaactaaaattaatattgaaactgggg
aagaaatatttgattcaaaattagagaaagagaatggaataagagtaacagatgaatata
aaaatcaagttggtcttctcacatcaaatgaattaaaaaaaataagaaataagtataaaa
ttagtcaaattgaatttgctttattactggatttaggagaaaaaaatataacaagatatg
aaaatggaatgatacaaaataaatcaattgattcattgattagattaatgaaaaataata
tgaattttttaacattattagtagaaaataagaataatttttctaatgaacgatattatg
aattattaagaaatataactttaaaaattttacaagagaatttgacacaaaatattatga
tagattcaaggaaaaatataccagttcgttctagagtggtggctgctccttttagtccta
gaaaagcaaaaaatagaaatagaagaataaaggaaaatggaatgattcaagtttctaaga
ttgggaatagaaaaattggagaaaatgaaaaaagtgaaattttaaaaagccgattttata
agtaaagaaagggttagaaaataatgagcgatgtgaatcttaagaaaaatattgttgaag
aaatagatgaaatggtaaaaaaaataaaagaagctcgtgaaaataatgaagaatataaaa
gtagagtagaaaatttagtactctactccttagataatggagaataccaaaaagtaacag
atgcgattgagtcattaggactgtcaagtgaaggggattctagtttatataataacttgg
gtgtattatatataaggcaaaatttgtatgagaagtcgatagaaaattttgaaaagtcaa
tagagatgggaaataaaaatattggtgtttatatcaatttaagtagagtttatttggaag
agaagaagttcaatgatgcaatagaaacattggaaaaagctaaaaatatttatgaaaata
aaagaaactaaagagcaaattttattaaaagaaatgaaagagaatttatctgatatatat
aatcagttaggaattacttattcag


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  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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