Protein Page for fig|485916.5.peg.1893

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

FIG search

Protein fig|485916.5.peg.1893: Desulfotomaculum acetoxidans DSM 771

This feature in The SEED Viewer

NCBI Taxonomy Id: 485916

Current Assignment: Phage antirepressor protein

Translate Function Assignments

Context on contig NC_013216 from base 1982903 to 1994136 (11234 bp)


Fid	Start	End	Size (nt)		Gap	SS	Function	Aliases
1889	1984315	1982903	1413	-			signal transduction histidine kinase regulating citrate/malate metabolism	locus\|Dtox_1870, protein_id\|YP_003191339.1, gi\|258515117, geneID\|8428849
1890	1984561	1985121	561	+	245	1: 1	hypothetical protein	locus\|Dtox_1871, protein_id\|YP_003191340.1, gi\|258515118, geneID\|8428850
1891	1985189	1985878	690	+	67	1: 1	hypothetical protein	locus\|Dtox_1872, protein_id\|YP_003191341.1, gi\|258515119, geneID\|8428851
1892	1985965	1988232	2268	+	86	3: 9 5 8	Phage DNA polymerase I (EC 2.7.7.7)	locus\|Dtox_1873, protein_id\|YP_003191342.1, gi\|258515120, InterPro:IPR001098, InterPro:IPR002298, InterPro:IPR002562, geneID\|8428852
1893	1988309	1989115	807	+	76		Phage antirepressor protein	locus\|Dtox_1874, protein_id\|YP_003191343.1, gi\|258515121, InterPro:IPR003497, InterPro:IPR005039, geneID\|8428853
1894	1989119	1990021	903	+	3	1: 1	hypothetical protein	locus\|Dtox_1875, protein_id\|YP_003191344.1, gi\|258515122, geneID\|8428854
1895	1990391	1990858	468	+	369	1: 2	Anaerobic ribonucleoside-triphosphate reductase-activating protein	locus\|Dtox_1877, protein_id\|YP_003191346.1, gi\|258515124, geneID\|8428856
1896	1990836	1992740	1905	+	-23	1: 2	Ribonucleoside-triphosphate reductase (formate) (EC 1.1.98.6)	locus\|Dtox_1878, protein_id\|YP_003191347.1, gi\|258515125, geneID\|8428857
1897	1992796	1993308	513	+	55	4: 7 4 10 6	Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23)	locus\|Dtox_1879, protein_id\|YP_003191348.1, gi\|258515126, InterPro:IPR008180, InterPro:IPR008181, geneID\|8428858
1898	1993286	1993405	120	+	-23	1: 1	hypothetical protein	locus\|Dtox_1880, protein_id\|YP_003191349.1, gi\|258515127, geneID\|8428859
1899	1993408	1994136	729	+	2	1: 3	SleB-like protein	locus\|Dtox_1881, protein_id\|YP_003191350.1, gi\|258515128, InterPro:IPR002482, InterPro:IPR011105, geneID\|8428860

Annotation History / View All Related Annotations

Help on Annotations

Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|485916.5.peg.1893 Phage antirepressor protein
MTNALAITNEMNRIQRVFNYEGQKVRTVLINGEPWFVGVDVCNILEINNSRQAISYLDVD
EKQTIPSRSLTVINSDSQKGGAQYITIINEPGLYSLILRSRKPEAKAFKRWITHEVIPSI
RKTGAYEMPGIVKDYLAMSEEDRAIAFFKKSKEFKVLEAENKILKPKAGKYDDFLNSDGV
FDWDAISSTLDIGRNTMLLELRERGYLQKRKGNNWNLALRRYEEAGWFVTKAVSQWTDKF
GNEYPKYKTFVTPTGLDNLIELFRKWGY

MD5 = aab7bcdf434c9f39c9e1ac2d19f91f20

DNA Sequence

>fig|485916.5.peg.1893 Phage antirepressor protein
atgactaacgcattagctattacaaacgaaatgaacaggattcaaagggtatttaattat
gagggccaaaaagtgcggacggtactgataaatggtgagccttggtttgttggagtcgat
gtatgtaatatattggaaataaataatagtcgtcaagctatttcatacttagatgttgat
gaaaaacagacaataccgtcccggagtttgaccgtcattaatagtgacagtcaaaaaggt
ggagcacagtatattaccataataaacgaaccgggcttatattctttaattcttagaagt
cgtaaaccagaagcaaaagcattcaaacgctggatcactcacgaggttattccctccatt
cgcaaaacaggggcatatgaaatgccgggaattgttaaagactatttggccatgtcagaa
gaagatcgggcgattgcgttttttaaaaagtcgaaggaatttaaagtcttggaagcagag
aataaaattttaaaacccaaggccggtaaatatgacgacttcttgaacagcgatggagta
ttcgattgggacgcaatttcaagcaccttggatataggaagaaacacaatgcttcttgaa
ctccgggaaagaggttacttacaaaagagaaagggtaataactggaacttagctctccgc
cgctacgaggaagctggttggttcgtgacaaaggccgttagccagtggacagataaattt
ggcaatgaataccccaaatataaaacatttgttactccaaccgggctggataatttaatt
gagctgttcaggaaatgggggtattaa

DNA with Flanking Sequence

>fig|485916.5.peg.1893 Phage antirepressor protein
ctacgataagctggccactgagatatgtgagatactgggaaccaaagctgtgccttatga
ttactggcaatataaaaaggagttgcctgttatactacgcaggcaattccgggcagttaa
aggggaagtggaacgggtacgccggatggctgtaaacgcgagaattcaaggaacagccgc
agacattatgaaaagagctttaatcaacctttataacgatggtaggaagattattggtac
ggtgcacgatgaggctcttttgatagttaacaaaaatattactcttgccgaggtggaaaa
aatcgaagcctgcatgataaggtctgcaaaccttaacgttcctattcgtgttgacactga
actttccacccgctggggtacaggaattaagaagggagcttactttaatggaaatgttgc
gtgaaatagaactggctgatagcaagggtgttacctacatggcagataaaaatctgaatt
atgaaatgggaggaaataaaatgactaacgcattagctattacaaacgaaatgaacagga
ttcaaagggtatttaattatgagggccaaaaagtgcggacggtactgataaatggtgagc
cttggtttgttggagtcgatgtatgtaatatattggaaataaataatagtcgtcaagcta
tttcatacttagatgttgatgaaaaacagacaataccgtcccggagtttgaccgtcatta
atagtgacagtcaaaaaggtggagcacagtatattaccataataaacgaaccgggcttat
attctttaattcttagaagtcgtaaaccagaagcaaaagcattcaaacgctggatcactc
acgaggttattccctccattcgcaaaacaggggcatatgaaatgccgggaattgttaaag
actatttggccatgtcagaagaagatcgggcgattgcgttttttaaaaagtcgaaggaat
ttaaagtcttggaagcagagaataaaattttaaaacccaaggccggtaaatatgacgact
tcttgaacagcgatggagtattcgattgggacgcaatttcaagcaccttggatataggaa
gaaacacaatgcttcttgaactccgggaaagaggttacttacaaaagagaaagggtaata
actggaacttagctctccgccgctacgaggaagctggttggttcgtgacaaaggccgtta
gccagtggacagataaatttggcaatgaataccccaaatataaaacatttgttactccaa
ccgggctggataatttaattgagctgttcaggaaatgggggtattaaaacatgacattat
ttaaccgggctggagccaggcaacttcgcgaggaagtagttgagagccacattgataata
agctggctgatgcaatactggaacattttaatgaaatccactccatggagttaccagtgg
atttcgagatagaacgaagtttattaaaagatgagttagattcaataaaccgaaaatctc
agtttttcttcactaacgaaatgattacattctcaccctcgtcagcttcgaagtgtgagc
gggagctactatttaaagccatcagcacaaccaaggataacaactcctttttcccttacc
agcgacgttggatgagaaatggtacggctgtacatgccgctgttcagaaggatttactct
atgctgaaaaatacctggacaatcctaaatttacagtagaacggacagtagaaggtaagc
cagcctgggaaagaaacatcaaaaaatctaaacagtttaatcataatggagttagcttcc
ttatata

  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
add a new link

  Functional Coupling


Score	Peg	Function

Attributes

Help on Attributes


Key Link Explains Key	Value

Protein Families

No protein families found

Compare Regions

Compared Regions in SeedViewer

Similarities

Help with SEED similarities options

> Show tool descriptions

FIG search