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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|469605.3.peg.249: Fusobacterium sp. 3_1_5R

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NCBI Taxonomy Id: 469605

Current Assignment: Phage antirepressor protein
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Context on contig NZ_GG657971 from base 75629 to 87351 (11723 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
238 75629 76210 582 +           hypothetical protein  
239 76530 77054 525 + 319         DNA repair protein radC  
240 77423 77145 279 - 90     1: 1   DNA-binding protein HU  
241 77583 78050 468 + 159         hypothetical protein  
242 78066 78527 462 + 15         hypothetical protein  
243 78640 78810 171 + 112         hypothetical protein  
244 78928 79050 123 + 117         hypothetical protein  
245 79047 79613 567 + -4         putative antirepressor  
246 79758 79946 189 + 144         hypothetical protein  
247 80186 80359 174 + 239         hypothetical protein  
248 80472 80747 276 + 112         hypothetical protein  
249 80760 81521 762 + 12         Phage antirepressor protein  
250 81561 81749 189 + 39         hypothetical protein  
251 82224 82433 210 + 474         hypothetical protein  
252 82597 82761 165 + 163         hypothetical protein  
253 82885 83397 513 + 123         hypothetical protein  
254 83397 84992 1596 + -1         hypothetical protein  
255 85196 85543 348 + 203         hypothetical protein  
256 85606 86010 405 + 62         hypothetical protein  
257 86024 86206 183 + 13         hypothetical protein  
258 86401 87351 951 + 194         FIG00670543: hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|469605.3.peg.249 Phage antirepressor protein
MNELKMIDERELLGKQFRVYGNFENPLFLAKDVAEWIEHNKPNELIANVDDTEKLKAIIS
HSGQNREMWFLTEDGLYEVLMLSRKPIAKEFKKEVKKILKTIRKNGMYVVDDLLDNPDLA
IQAFTKLKEEREKRKELEIKLEEDKPKVLFADSVSASKTSVLVGELAKLLKQNGIDIGQN
RLFEQLRNLGYLIQKKGSSFNMPTQRSMELKLFEIKETTISQPNGEIRIQKTPKVTGKGQ
QYFINLFLKNKIA

MD5 = ac6b3d2a58945ebddeda275b8ed2b216


  DNA Sequence

>fig|469605.3.peg.249 Phage antirepressor protein
atgaatgaattaaaaatgattgacgaaagagaattacttgggaaacaatttcgagtatat
ggaaattttgaaaatcctttattcttagcaaaagatgtagcagaatggattgaacacaat
aaaccaaatgagttaatcgccaatgtagatgatactgaaaagctgaaggcgataatatcg
cactcaggtcaaaatagagaaatgtggtttctaacagaagatggactatacgaagttcta
atgctaagtagaaaaccaatcgcaaaagaatttaaaaaagaagtaaagaaaattttaaaa
acaatccgaaaaaatggaatgtatgtagtagatgacttgctagataatcctgatttagca
attcaggcatttacaaaattaaaagaggagcgagaaaaaagaaaagaattggaaataaaa
ttagaagaggataaaccgaaagtattatttgcagattctgtttctgcttctaagacttct
gttttagtaggagagttggcgaaactattaaaacaaaatggaatagatatagggcaaaac
agactatttgaacagttacgaaatttaggatatttgatacaaaagaaaggttctagtttc
aatatgcctacacaaagaagcatggagttaaagctatttgaaatcaaagaaacaaccatt
agtcaaccaaatggagaaatacgaattcaaaaaactccaaaggtaacaggaaaagggcaa
caatattttatcaatttgtttctaaagaacaaaatagcataa


  DNA with Flanking Sequence

>fig|469605.3.peg.249 Phage antirepressor protein
tccgttattaaaaaagtttgggataggagttgatgaaagagaagtcgaaatcatttatga
tgaagaacaacaaacaataactgtaaagaaaaagaaataaaaaatcccccataagaacct
tttatgtcctgtatggaggataccagtataataaactggatgactacctttattatactg
taaaactccttaaaattcaaggaggtattttaatgttgacggaaaatgaaaaaattgcta
tgaagtttgtagaaagttgtagaaatcatttaatgatgaaagatgatttaacggaagtgg
aaaataagatgtttagtctattagaaaaagtgagtaagaaattaaagctaatagaaaacg
gaggaccactacaaacagaatttgagaaagcattgtatgacacactaaacctaactaaag
aaatctattttgagttcggaaaccattatggtggtgtttttgaatctcaatattacgatg
gagtttaggagagtggtcgcatgaatgaattaaaaatgattgacgaaagagaattacttg
ggaaacaatttcgagtatatggaaattttgaaaatcctttattcttagcaaaagatgtag
cagaatggattgaacacaataaaccaaatgagttaatcgccaatgtagatgatactgaaa
agctgaaggcgataatatcgcactcaggtcaaaatagagaaatgtggtttctaacagaag
atggactatacgaagttctaatgctaagtagaaaaccaatcgcaaaagaatttaaaaaag
aagtaaagaaaattttaaaaacaatccgaaaaaatggaatgtatgtagtagatgacttgc
tagataatcctgatttagcaattcaggcatttacaaaattaaaagaggagcgagaaaaaa
gaaaagaattggaaataaaattagaagaggataaaccgaaagtattatttgcagattctg
tttctgcttctaagacttctgttttagtaggagagttggcgaaactattaaaacaaaatg
gaatagatatagggcaaaacagactatttgaacagttacgaaatttaggatatttgatac
aaaagaaaggttctagtttcaatatgcctacacaaagaagcatggagttaaagctatttg
aaatcaaagaaacaaccattagtcaaccaaatggagaaatacgaattcaaaaaactccaa
aggtaacaggaaaagggcaacaatattttatcaatttgtttctaaagaacaaaatagcat
aaatgtatatgaacattgggaattgaataaggagtaaacttatgaaagaagaaagattac
aaagaacaatcactatcaattcttccttagacaccgcaattatagaaattgcagatgaga
atgatagaaggtatacttttgtattagaagcattagtatatgaagcattgcaaggaaaga
cggatatagggaagatattaaataattatgagcggtataagaagttatagaagaacattt
ataagagggagaaattccctctttttatttttgaaaaatataaaaaaaactattgacata
atgtaaacattatgatattatatattcaagaggggaggaatgcaaatgagatatgcgttt
ttgggagaaaatcataatgatatgttccacagtagagtacattataaaaattacaaagtg
gataatcaaaatgattaggaggtataaagggcattaagcccctttcctcccctccctctt
aaaaaatataaaggaggtataa


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
gi|257451497 Fusobacterium sp. 3_1_5R NCBI   putative antirepressor
ref|ZP_05616796.1 Fusobacterium sp. 3_1_5R RefSeq   putative antirepressor


  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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