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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|451515.3.peg.2460: Staphylococcus aureus subsp. aureus USA300_FPR3757

This feature in The SEED Viewer

NCBI Taxonomy Id: 451515

Current Assignment: Integral membrane protein
Translate Function Assignments


Context on contig NC_007793 from base 2471697 to 2482930 (11234 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2455 2472344 2471697 648 -       1: 4   Multidrug resistance protein [function not yet clear] locus|SAUSA300_2299, protein_id|YP_494934.1, gi|87160414, geneID|3913132
2456 2472465 2473016 552 + 120     1: 4   TetR family regulatory protein of MDR cluster locus|SAUSA300_2300, protein_id|YP_494935.1, gi|87162322, geneID|3913456
2457 2474454 2473246 1209 - 229     1: 2 dlit(11042376) Teicoplanin resistance transporter, TcaB family => TcaB gene_name|tcaB, locus|SAUSA300_2301, protein_id|YP_494936.1, gi|87161925, geneID|3914585
2458 2476105 2474723 1383 - 268     1: 2   Teicoplanin resistance associated membrane protein TcaA gene_name|tcaA, locus|SAUSA300_2302, protein_id|YP_494937.1, gi|87161173, geneID|3914747
2459 2476800 2476345 456 - 239     2: 2 5 dlit(11042376)
dlit(15060048)		 Teicoplanin-resistance associated HTH-type transcriptional regulator TcaR gene_name|tcaR, locus|SAUSA300_2303, protein_id|YP_494938.1, gi|87159885, geneID|3914106
2460 2476995 2477963 969 + 194         Integral membrane protein locus|SAUSA300_2304, protein_id|YP_494939.1, gi|87162083, geneID|3914626
2461 2478538 2478894 357 + 574         truncated transposase locus|SAUSA300_2305, protein_id|YP_494940.1, gi|87161359, geneID|3912876
2462 2479699 2479034 666 - 139     2: 1 3   Heme efflux system ATPase HrtA locus|SAUSA300_2306, protein_id|YP_494941.1, gi|87160988, geneID|3913320
2463 2480754 2479699 1056 - -1     2: 1 3 dlit(16933993) Heme efflux system permease HrtB locus|SAUSA300_2307, protein_id|YP_494942.1, gi|87161438, geneID|3914111
2464 2480890 2481564 675 + 135     1: 1   Two-component response regulator colocalized with HrtAB transporter locus|SAUSA300_2308, protein_id|YP_494943.1, gi|87161981, geneID|3914878
2465 2481557 2482930 1374 + -8     2: 1 3   Sensor histidine kinase colocalized with HrtAB transporter locus|SAUSA300_2309, protein_id|YP_494944.1, gi|87160324, geneID|3915399

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|451515.3.peg.2460 Integral membrane protein
MLLNLLLIFILIVICPLIFNYTLTLNLTCYILVVISIFLSLIYSIMTYTFPWSMFVTFII
ISIIMLFKHRYLFSHTSSRLFIKKLLSFSYKFVLYTSALLFISTIQSPIVKGLSMWLAIL
CLSLLLTFICYLVWTVSYRHRSYNKEVDIIIVLGAGIFTEFVTPMLAARLDRALDIYQQQ
ASATKIIVSGGQGPDEPISEALAMQRYLIAHGVDKTDILMESHSINTYTNFLYSKQIINN
LYHEAVKIVCVTSQFHVLRALRLAQKLGLSIDGVGSHTPYHFFLHVLIKDYLGVMYQYRL
LLTLYCSSSWFICLYAAFIYNS

MD5 = dc4c0641b45127fbb6c797456f5f4342


  DNA Sequence

>fig|451515.3.peg.2460 Integral membrane protein
atgttattgaatttattattaatatttatacttatcgttatttgtccgttaattttcaac
tatactctgacgttaaatttaacatgctacatcttagttgtcatatcgatatttttgtca
ctcatctatagcatcatgacctatactttcccttggtctatgtttgtaacatttataata
atcagtattatcatgctattcaaacatagatatttattttctcatacttctagtcgctta
tttattaaaaaattattatctttttcatataaatttgtactctacacatcagcacttcta
tttataagtacgattcagtcacctattgtgaaaggtttgtctatgtggttagctatatta
tgtctttccctgttactaacctttatttgttatctcgtttggacagtatcatatagacat
agatcatacaacaaagaagttgatatcataattgtgttaggtgctggtatttttaccgaa
tttgtcacaccaatgcttgcagcgcgtttagatcgtgcacttgatatctatcaacaacaa
gcatcagcaacaaagatcattgtatctggcggacaaggaccagacgaaccaatttctgaa
gctttagctatgcaacgttatttgattgcacatggtgttgataaaacagatatactaatg
gaatctcactctataaatacatacacaaactttttatattctaaacaaatcatcaacaat
ttgtatcatgaagcagttaaaattgtttgtgtaacaagtcagtttcatgtattgcgcgcc
ttacgactagcccaaaaattaggtttatctatcgatggtgtcggaagtcatacaccatat
cactttttcttacatgtgctcatcaaagattatctaggcgtaatgtatcagtatagattg
ttattaacgttatattgttcaagtagttggtttatatgtctttacgccgcttttatttat
aatagttaa


  DNA with Flanking Sequence

>fig|451515.3.peg.2460 Integral membrane protein
tttgtcagttaaggttatgaatttcaaacgttgatcaatatttaaatttggtttatctaa
cttaactaatttagcatcgattaactttttaattcgtcggcttactgcggccttatttac
accttgtctttgcgtgatttcactaattgtcaaaggttctttatttaacatacctaatac
gttagactgctctaatgaaatttcatattcattttgtaaatctttcaacatttttgcagt
taatgcgttaacgttatttataaactgctctaaaaattgaatatggtcttgtaaatgttt
taccataattatttctccctaattactatttttataaagtatcctcagcaatcattgtat
cgcacatctaaaaaacacaaaaatattgacccatatataatataacaaattaagatttac
atgttgctgctttctccttgctttaataaattaaatcatctacatttatatttaatattt
attataagcgaggtgtcagtatgttattgaatttattattaatatttatacttatcgtta
tttgtccgttaattttcaactatactctgacgttaaatttaacatgctacatcttagttg
tcatatcgatatttttgtcactcatctatagcatcatgacctatactttcccttggtcta
tgtttgtaacatttataataatcagtattatcatgctattcaaacatagatatttatttt
ctcatacttctagtcgcttatttattaaaaaattattatctttttcatataaatttgtac
tctacacatcagcacttctatttataagtacgattcagtcacctattgtgaaaggtttgt
ctatgtggttagctatattatgtctttccctgttactaacctttatttgttatctcgttt
ggacagtatcatatagacatagatcatacaacaaagaagttgatatcataattgtgttag
gtgctggtatttttaccgaatttgtcacaccaatgcttgcagcgcgtttagatcgtgcac
ttgatatctatcaacaacaagcatcagcaacaaagatcattgtatctggcggacaaggac
cagacgaaccaatttctgaagctttagctatgcaacgttatttgattgcacatggtgttg
ataaaacagatatactaatggaatctcactctataaatacatacacaaactttttatatt
ctaaacaaatcatcaacaatttgtatcatgaagcagttaaaattgtttgtgtaacaagtc
agtttcatgtattgcgcgccttacgactagcccaaaaattaggtttatctatcgatggtg
tcggaagtcatacaccatatcactttttcttacatgtgctcatcaaagattatctaggcg
taatgtatcagtatagattgttattaacgttatattgttcaagtagttggtttatatgtc
tttacgccgcttttatttataatagttaatccacaaacaaactattattataggttgttt
ctaatattgcgtcaaactatctttaaatattcgttaatccttgattagacaattgttata
ttgaaaataaataaactaaagagtctgggacattaatccctaaaaaaaacagcagtaaga
taattttcaattagaaaatatcttactgctgttctctatttatacaatacttcgtattga
atggcttcgctatgcccatctggcacattactgtaaaattctataaatagaatttttgat
gacgggtcccttcctagggtgccgtctcagccaccccaaccggcacattgttgtaagctg
actatatgtcagcttctgtgttggggcccctgtcttcgactggcactgctccctcaggag
tctcgccattaatactacgtattaacatgtaattttacttttaaatactttaaaaaaata
agacactttggccaacttaagccaggatacaatttacaaatagcgacaa


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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