Protein Page for fig|451515.3.peg.2458

SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov

FIG search

Protein fig|451515.3.peg.2458: Staphylococcus aureus subsp. aureus USA300_FPR3757

This feature in The SEED Viewer

NCBI Taxonomy Id: 451515

Current Assignment: Teicoplanin resistance associated membrane protein TcaA

Translate Function Assignments

Context on contig NC_007793 from base 2469753 to 2481564 (11812 bp)


Fid	Start	End	Size (nt)		Gap	SS	Ev	Function	Aliases
2454	2471684	2469753	1932	-		1: 1		Membrane component of multidrug resistance system	locus\|SAUSA300_2298, protein_id\|YP_494933.1, gi\|87161734, geneID\|3913020
2455	2472344	2471697	648	-	12	1: 1		Multidrug resistance protein [function not yet clear]	locus\|SAUSA300_2299, protein_id\|YP_494934.1, gi\|87160414, geneID\|3913132
2456	2472465	2473016	552	+	120	1: 1		TetR family regulatory protein of MDR cluster	locus\|SAUSA300_2300, protein_id\|YP_494935.1, gi\|87162322, geneID\|3913456
2457	2474454	2473246	1209	-	229	1: 2	dlit(11042376)	Teicoplanin resistance transporter, TcaB family => TcaB	gene_name\|tcaB, locus\|SAUSA300_2301, protein_id\|YP_494936.1, gi\|87161925, geneID\|3914585
2458	2476105	2474723	1383	-	268	1: 2		Teicoplanin resistance associated membrane protein TcaA	gene_name\|tcaA, locus\|SAUSA300_2302, protein_id\|YP_494937.1, gi\|87161173, geneID\|3914747
2459	2476800	2476345	456	-	239	2: 2 5	dlit(11042376) dlit(15060048)	Teicoplanin-resistance associated HTH-type transcriptional regulator TcaR	gene_name\|tcaR, locus\|SAUSA300_2303, protein_id\|YP_494938.1, gi\|87159885, geneID\|3914106
2460	2476995	2477963	969	+	194			Integral membrane protein	locus\|SAUSA300_2304, protein_id\|YP_494939.1, gi\|87162083, geneID\|3914626
2461	2478538	2478894	357	+	574			truncated transposase	locus\|SAUSA300_2305, protein_id\|YP_494940.1, gi\|87161359, geneID\|3912876
2462	2479699	2479034	666	-	139	2: 3 4		Heme efflux system ATPase HrtA	locus\|SAUSA300_2306, protein_id\|YP_494941.1, gi\|87160988, geneID\|3913320
2463	2480754	2479699	1056	-	-1	2: 3 4	dlit(16933993)	Heme efflux system permease HrtB	locus\|SAUSA300_2307, protein_id\|YP_494942.1, gi\|87161438, geneID\|3914111
2464	2480890	2481564	675	+	135	1: 3		Two-component response regulator colocalized with HrtAB transporter	locus\|SAUSA300_2308, protein_id\|YP_494943.1, gi\|87161981, geneID\|3914878

Annotation History / View All Related Annotations

Help on Annotations

Subsystems in Which This Protein Plays a Role


Subsystem	Curator	Role
Teicoplanin-resistance_in_Staphylococcus	SvetaG	Teicoplanin resistance associated membrane protein TcaA

Protein Sequence

>fig|451515.3.peg.2458 Teicoplanin resistance associated membrane protein TcaA
MKSCPKCGQQAQDDVQICTQCGHKFDSRQALYRKSTDEDIQTNNIKMRKMVPWAIGFFIL
ILIIILFFLLRNFNSPEAQTKILVNAIENNDKQKVATLLSTKDNKVDSEEAKVYINYIKD
EVGLKQFVSDLKNTVHKLNKSKTSVASYIQTRSGQNILRVSKNGTRYIFFDNMSFTAPTK
QPIVKPKEKTKYEFKSGGKKKMVIAEANKVTPIGNFIPGTYRIPAMKSTENGDFAGHLKF
DFRQSNSETVDVTEDFEEANISVTLKGDTKLNDSSKKVTINDHEMAFSSSKTYGPYPQNK
DITISASGKAKDKTFTTQTKTIKASDLKYNTEITLNFDSEDIEDYVEKKEKEENSLKNKL
IEFFAGYSLANNAAFNQSDFDFVSSYIKKGSSFYDDVKKRVSKGSLMMISSPQIIDAEKH
GDKITATVRLINENGKQVDKEYELEQGSQDRLQLIKTSEK

MD5 = 388b2b548d47ab969df7054f23e27a19

DNA Sequence

>fig|451515.3.peg.2458 Teicoplanin resistance associated membrane protein TcaA
atgaaatcttgcccgaagtgcggacaacaagcacaagatgatgtacagatatgtacacaa
tgtggacataaatttgatagtcgtcaagcattatatagaaagtcaaccgatgaagatata
caaactaataacatcaagatgagaaaaatggtgccttgggcaattggttttttcatttta
atcttaattattatattgttctttttactaagaaacttcaattcacctgaagcgcaaact
aaaatattagtgaatgcgattgagaataatgataaacaaaaagtagcaacattattaagt
actaaagataataaagtagattctgaagaagcaaaagtatacattaactatatcaaagat
gaagttgggcttaagcaatttgtcagcgaccttaaaaatacggtacataaattgaataag
agtaagaccagcgtagcttcttatattcaaaccagatctggtcaaaatatattacgtgta
agtaaaaatggcacacgttatatctttttcgataatatgagctttactgcacctaccaag
caaccaattgttaaaccgaaagaaaaaacaaaatatgagtttaaatctggtggtaagaaa
aagatggttatagctgaagcaaataaagtgacgccaataggtaattttataccggggaca
tatagaattccagctatgaaatcaactgagaacggtgattttgcaggccatttaaaattt
gattttagacaaagtaattctgaaacggtagatgttactgaagattttgaagaagcaaat
atatctgtaactttaaaaggcgatacaaaattaaatgatagttctaaaaaagtaactata
aatgaccatgaaatggcattttcaagttccaaaacgtatggtccatatccacaaaataaa
gatattaccatttcagcttcaggtaaagcgaaagataaaacatttacaacacagacgaag
acgattaaagctagcgatttaaaatacaatacagagataactttgaattttgacagtgaa
gatatcgaagactatgttgaaaagaaagaaaaagaagaaaacagcttgaagaacaaattg
atagaattctttgctggatattctttagcgaataatgctgcgtttaatcagtcggatttt
gattttgtatcatcatatataaaaaaaggatcatctttttatgatgatgtaaagaagcgt
gtatctaaaggaagtttaatgatgattagttcaccacaaattatagatgctgaaaaacat
ggtgataagattaccgcaaccgtaagattaataaatgaaaacggtaagcaagtagataaa
gaatatgagcttgaacaaggctcgcaagaccgcttgcaattaatcaagacatcagaaaaa
tag

DNA with Flanking Sequence

>fig|451515.3.peg.2458 Teicoplanin resistance associated membrane protein TcaA
gccgcagtaagccgacgaattaaaaagttaatcgatgctaaattagttaagttagataaa
ccaaatttaaatattgatcaacgtttgaaattcataaccttaactgacaaaggtagagca
tatttgaaagaacgtaatgcgattatgacagatattgcgcaagatattactaatgattta
aattctgaagatattgaaaatgtaaggcaagtattagaagtcatcaatcatcgcattaaa
acatatagcaatcataaataggtttttgaaggtgttcaaatataagactaaatatgtatg
tattgaacaccttctttttagttataattgagagagtactttcataaataatgtaataag
gtacaattctaaagtaaagttaatcatttcttgaattgtattcttgggataatatttgta
aaataataatggtaaaataatgaaataatttttgtgatatacatataacaattgaagagg
aacagaattgaggtgaaagtatgaaatcttgcccgaagtgcggacaacaagcacaagatg
atgtacagatatgtacacaatgtggacataaatttgatagtcgtcaagcattatatagaa
agtcaaccgatgaagatatacaaactaataacatcaagatgagaaaaatggtgccttggg
caattggttttttcattttaatcttaattattatattgttctttttactaagaaacttca
attcacctgaagcgcaaactaaaatattagtgaatgcgattgagaataatgataaacaaa
aagtagcaacattattaagtactaaagataataaagtagattctgaagaagcaaaagtat
acattaactatatcaaagatgaagttgggcttaagcaatttgtcagcgaccttaaaaata
cggtacataaattgaataagagtaagaccagcgtagcttcttatattcaaaccagatctg
gtcaaaatatattacgtgtaagtaaaaatggcacacgttatatctttttcgataatatga
gctttactgcacctaccaagcaaccaattgttaaaccgaaagaaaaaacaaaatatgagt
ttaaatctggtggtaagaaaaagatggttatagctgaagcaaataaagtgacgccaatag
gtaattttataccggggacatatagaattccagctatgaaatcaactgagaacggtgatt
ttgcaggccatttaaaatttgattttagacaaagtaattctgaaacggtagatgttactg
aagattttgaagaagcaaatatatctgtaactttaaaaggcgatacaaaattaaatgata
gttctaaaaaagtaactataaatgaccatgaaatggcattttcaagttccaaaacgtatg
gtccatatccacaaaataaagatattaccatttcagcttcaggtaaagcgaaagataaaa
catttacaacacagacgaagacgattaaagctagcgatttaaaatacaatacagagataa
ctttgaattttgacagtgaagatatcgaagactatgttgaaaagaaagaaaaagaagaaa
acagcttgaagaacaaattgatagaattctttgctggatattctttagcgaataatgctg
cgtttaatcagtcggattttgattttgtatcatcatatataaaaaaaggatcatcttttt
atgatgatgtaaagaagcgtgtatctaaaggaagtttaatgatgattagttcaccacaaa
ttatagatgctgaaaaacatggtgataagattaccgcaaccgtaagattaataaatgaaa
acggtaagcaagtagataaagaatatgagcttgaacaaggctcgcaagaccgcttgcaat
taatcaagacatcagaaaaatagagtataaaacttaaataagatgcatgtgtcatggaat
acaaacaacatcctttcaaagtatttacaattagtgtgaattactttgaagggattgttt
tttgtggaaaaatttatgaagtgctgaggtttatatcattttataccttttataagttgt
aatgatgttcatgaaacttgtgactaatgctaatatataaaagagcatatttaaatttag
tttctgttcgtgatagttataaactaatcattatataaaggagatagtcatatgaatgat
ttaacgcattttaacaagcgttcaccgatatttattattattttaggatctttgacggcc
attggagcattatcgatagatatgtttttgcctggattaccagatattagacatgatttt
caaacaacgacgtctaacgcacaattaacattatcgatgtttatgattggtttagcgttt
ggtaatttgtttgctggtccaatttcagattcaactgggcgca

  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
add a new link

  Functional Coupling


Score	Peg	Function

Attributes

Help on Attributes


Key Link Explains Key	Value

Protein Families

No protein families found

Compare Regions

Compared Regions in SeedViewer

Similarities

Help with SEED similarities options

> Show tool descriptions

FIG search