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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|451515.3.peg.2457: Staphylococcus aureus subsp. aureus USA300_FPR3757

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NCBI Taxonomy Id: 451515

Current Assignment: Teicoplanin resistance transporter, TcaB family => TcaB
Translate Function Assignments


Context on contig NC_007793 from base 2467741 to 2479699 (11959 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2452 2468598 2467741 858 -       1: 5   putative esterase locus|SAUSA300_2296, protein_id|YP_494931.1, gi|87162082, geneID|3914625
2453 2468869 2469507 639 + 270         FIG01108339: hypothetical protein locus|SAUSA300_2297, protein_id|YP_494932.1, gi|87162144, geneID|3914691
2454 2471684 2469753 1932 - 245     1: 2   Membrane component of multidrug resistance system locus|SAUSA300_2298, protein_id|YP_494933.1, gi|87161734, geneID|3913020
2455 2472344 2471697 648 - 12     1: 2   Multidrug resistance protein [function not yet clear] locus|SAUSA300_2299, protein_id|YP_494934.1, gi|87160414, geneID|3913132
2456 2472465 2473016 552 + 120     1: 2   TetR family regulatory protein of MDR cluster locus|SAUSA300_2300, protein_id|YP_494935.1, gi|87162322, geneID|3913456
2457 2474454 2473246 1209 - 229     1: 1 dlit(11042376) Teicoplanin resistance transporter, TcaB family => TcaB gene_name|tcaB, locus|SAUSA300_2301, protein_id|YP_494936.1, gi|87161925, geneID|3914585
2458 2476105 2474723 1383 - 268     1: 1   Teicoplanin resistance associated membrane protein TcaA gene_name|tcaA, locus|SAUSA300_2302, protein_id|YP_494937.1, gi|87161173, geneID|3914747
2459 2476800 2476345 456 - 239     2: 1 3 dlit(11042376)
dlit(15060048)		 Teicoplanin-resistance associated HTH-type transcriptional regulator TcaR gene_name|tcaR, locus|SAUSA300_2303, protein_id|YP_494938.1, gi|87159885, geneID|3914106
2460 2476995 2477963 969 + 194         Integral membrane protein locus|SAUSA300_2304, protein_id|YP_494939.1, gi|87162083, geneID|3914626
2461 2478538 2478894 357 + 574         truncated transposase locus|SAUSA300_2305, protein_id|YP_494940.1, gi|87161359, geneID|3912876
2462 2479699 2479034 666 - 139     2: 6 4   Heme efflux system ATPase HrtA locus|SAUSA300_2306, protein_id|YP_494941.1, gi|87160988, geneID|3913320

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

Subsystem Curator Role
Teicoplanin-resistance_in_Staphylococcus SvetaG Teicoplanin resistance associated membrane protein TcaB


  Protein Sequence

>fig|451515.3.peg.2457 Teicoplanin resistance transporter, TcaB family => TcaB
MNDLTHFNKRSPIFIIILGSLTAIGALSIDMFLPGLPDIRHDFQTTTSNAQLTLSMFMIG
LAFGNLFAGPISDSTGRRKPLIIAMIIFTLASLGIVFVHNIWLMVALRFLQGVTGGAAAV
ISRAIASDMYSGNELTKFMALLMLVNGIAPVVAPTIGGIILNYSVWRMVFVILTIFGFVM
VIGSLLKVPESLTVTNRESSSGLKTMFKNFKILLKTPRFVLPMLIQGMTFVILFTYISAS
PFIIQKIYGMTAIQFSWMFAGIGITLIISSQLTGYLVDFIDSQKLMRGMTMIQIIGVILV
TIVLLNHWNFWILAIGFIILIAPVTGVATLGFTIAMDESSSGRGSSSSLLGLVQFLFGGV
ASPLVGVKGEDNPIPYIIIIIATAVILIILQIYNMKVFKTNR

MD5 = 00202fd0d6e590f24ef3a945be7aa654


  DNA Sequence

>fig|451515.3.peg.2457 Teicoplanin resistance transporter, TcaB family => TcaB
atgaatgatttaacgcattttaacaagcgttcaccgatatttattattattttaggatct
ttgacggccattggagcattatcgatagatatgtttttgcctggattaccagatattaga
catgattttcaaacaacgacgtctaacgcacaattaacattatcgatgtttatgattggt
ttagcgtttggtaatttgtttgctggtccaatttcagattcaactgggcgcagaaagccg
cttattatagctatgattatttttacattagcaagtttaggtattgtttttgtacataat
atttggctgatggttgcattaagatttcttcaaggagtgacaggtggcgcagcagcagtt
atttcaagagctatagcaagtgatatgtatagtggtaatgaactaactaagtttatggca
ttattgatgcttgttaatggtattgcaccagttgttgcgccaacaatagggggcataatt
ttaaattattctgtctggcgtatggtctttgtcattctgactatctttggcttcgtcatg
gtcataggttctttattaaaagtacctgaatcattaacagtgacaaatcgtgagtcaagt
agtggattaaagacaatgtttaaaaacttcaaaatattattgaagacgccacgttttgta
ttaccaatgctcattcaaggtatgacatttgtaatattatttacttatatttctgcgtct
ccgtttattattcaaaaaatttatggcatgactgcaatacaatttagttggatgtttgca
ggaattggtattacgctcattatatcaagtcaacttactgggtaccttgttgattttata
gactcacaaaaattgatgagaggcatgacgatgattcagattatcggtgtaattttagtg
acgattgtattgcttaatcattggaacttttggattttagcgataggatttatcatttta
atagcaccagtgacaggtgttgcgacacttggttttacaatagctatggatgaaagtagt
agtggtagagggagttcatcaagtttattaggtttagtacagtttttatttggtggtgtt
gcatcgccattagtgggggtaaaaggtgaagataatcctataccttacataattattatt
atagctacagcagttatattaattattttacagatttataatatgaaggtatttaaaaca
aatcgatga


  DNA with Flanking Sequence

>fig|451515.3.peg.2457 Teicoplanin resistance transporter, TcaB family => TcaB
atcatatataaaaaaaggatcatctttttatgatgatgtaaagaagcgtgtatctaaagg
aagtttaatgatgattagttcaccacaaattatagatgctgaaaaacatggtgataagat
taccgcaaccgtaagattaataaatgaaaacggtaagcaagtagataaagaatatgagct
tgaacaaggctcgcaagaccgcttgcaattaatcaagacatcagaaaaatagagtataaa
acttaaataagatgcatgtgtcatggaatacaaacaacatcctttcaaagtatttacaat
tagtgtgaattactttgaagggattgttttttgtggaaaaatttatgaagtgctgaggtt
tatatcattttataccttttataagttgtaatgatgttcatgaaacttgtgactaatgct
aatatataaaagagcatatttaaatttagtttctgttcgtgatagttataaactaatcat
tatataaaggagatagtcatatgaatgatttaacgcattttaacaagcgttcaccgatat
ttattattattttaggatctttgacggccattggagcattatcgatagatatgtttttgc
ctggattaccagatattagacatgattttcaaacaacgacgtctaacgcacaattaacat
tatcgatgtttatgattggtttagcgtttggtaatttgtttgctggtccaatttcagatt
caactgggcgcagaaagccgcttattatagctatgattatttttacattagcaagtttag
gtattgtttttgtacataatatttggctgatggttgcattaagatttcttcaaggagtga
caggtggcgcagcagcagttatttcaagagctatagcaagtgatatgtatagtggtaatg
aactaactaagtttatggcattattgatgcttgttaatggtattgcaccagttgttgcgc
caacaatagggggcataattttaaattattctgtctggcgtatggtctttgtcattctga
ctatctttggcttcgtcatggtcataggttctttattaaaagtacctgaatcattaacag
tgacaaatcgtgagtcaagtagtggattaaagacaatgtttaaaaacttcaaaatattat
tgaagacgccacgttttgtattaccaatgctcattcaaggtatgacatttgtaatattat
ttacttatatttctgcgtctccgtttattattcaaaaaatttatggcatgactgcaatac
aatttagttggatgtttgcaggaattggtattacgctcattatatcaagtcaacttactg
ggtaccttgttgattttatagactcacaaaaattgatgagaggcatgacgatgattcaga
ttatcggtgtaattttagtgacgattgtattgcttaatcattggaacttttggattttag
cgataggatttatcattttaatagcaccagtgacaggtgttgcgacacttggttttacaa
tagctatggatgaaagtagtagtggtagagggagttcatcaagtttattaggtttagtac
agtttttatttggtggtgttgcatcgccattagtgggggtaaaaggtgaagataatccta
taccttacataattattattatagctacagcagttatattaattattttacagatttata
atatgaaggtatttaaaacaaatcgatgataaacatagtttcttctattatattgaattg
aaaaattaaaaaacaaaacttgagctattcatagacctatgaatttagcatcaaaaataa
aaatgccgagattattatgtggaaatctcggcatttttatattgatagcaccgttacata
tgtactattatctatccatttggtttaactttatctagttgttttatagcatttctttat
tagaatgaaaccgtattattagttttgaagtttaatcgtattagccaataaaatgtcagc
aacttcttcaggtgattcattacaaccattcgaaagccaattaataaacaccccagcttg
accgcctatgatatatgtaacataaagctgtttattggttactgtagtactatagtcatt
cataatttgttgatagtaatctctcgctaaatttatatagtctatgaataatgttttcat
tggataggtaactaaaatgtctttgaaaaactgctcattgtgcttgata


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function


  Attributes

Help on Attributes

Key
Link Explains Key		 Value
evidence_code dlit(11042376);SvetaG


  Protein Families

No protein families found

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