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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|451515.3.peg.2456: Staphylococcus aureus subsp. aureus USA300_FPR3757

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NCBI Taxonomy Id: 451515

Current Assignment: TetR family regulatory protein of MDR cluster
Translate Function Assignments


Context on contig NC_007793 from base 2467214 to 2477963 (10750 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2451 2467214 2467633 420 +           FIG01107838: hypothetical protein locus|SAUSA300_2295, protein_id|YP_494930.1, gi|87159959, geneID|3913846
2452 2468598 2467741 858 - 107     1: 4   putative esterase locus|SAUSA300_2296, protein_id|YP_494931.1, gi|87162082, geneID|3914625
2453 2468869 2469507 639 + 270         FIG01108339: hypothetical protein locus|SAUSA300_2297, protein_id|YP_494932.1, gi|87162144, geneID|3914691
2454 2471684 2469753 1932 - 245     1: 1   Membrane component of multidrug resistance system locus|SAUSA300_2298, protein_id|YP_494933.1, gi|87161734, geneID|3913020
2455 2472344 2471697 648 - 12     1: 1   Multidrug resistance protein [function not yet clear] locus|SAUSA300_2299, protein_id|YP_494934.1, gi|87160414, geneID|3913132
2456 2472465 2473016 552 + 120     1: 1   TetR family regulatory protein of MDR cluster locus|SAUSA300_2300, protein_id|YP_494935.1, gi|87162322, geneID|3913456
2457 2474454 2473246 1209 - 229     1: 2 dlit(11042376) Teicoplanin resistance transporter, TcaB family => TcaB gene_name|tcaB, locus|SAUSA300_2301, protein_id|YP_494936.1, gi|87161925, geneID|3914585
2458 2476105 2474723 1383 - 268     1: 2   Teicoplanin resistance associated membrane protein TcaA gene_name|tcaA, locus|SAUSA300_2302, protein_id|YP_494937.1, gi|87161173, geneID|3914747
2459 2476800 2476345 456 - 239     2: 2 3 dlit(11042376)
dlit(15060048)		 Teicoplanin-resistance associated HTH-type transcriptional regulator TcaR gene_name|tcaR, locus|SAUSA300_2303, protein_id|YP_494938.1, gi|87159885, geneID|3914106
2460 2476995 2477963 969 + 194         Integral membrane protein locus|SAUSA300_2304, protein_id|YP_494939.1, gi|87162083, geneID|3914626

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

Subsystem Curator Role
Multidrug_Resistance,_2-protein_version_Found_in_Gram-positive_bacteria RossO TetR family regulatory protein of MDR cluster


  Protein Sequence

>fig|451515.3.peg.2456 TetR family regulatory protein of MDR cluster
MKRQAKIEIQNALVDLMAEYPFQEISTKMICAYCNINRSTFYDYYKDKFDLLDTINSKHK
EKFQFLLSALHHNFENIKQDKLKLYKFFIIIAKYIKHNEQFFKDILVTYPMKTLFIDYIN
LARDYYQQIMNDYSTTVTNKQLYVTYIIGGQAGVFINWLSNGCNESPEEVADILLANTIK
LQN

MD5 = 21f90bc5ff4d2057870406b9f4b2d7ed


  DNA Sequence

>fig|451515.3.peg.2456 TetR family regulatory protein of MDR cluster
atgaaacgacaagccaaaatagaaattcaaaacgcacttgttgatttgatggctgaatat
ccttttcaagaaatatccactaaaatgatttgcgcgtattgtaatattaatcgttctact
ttttatgattattacaaagataaatttgatttattggataccatcaactcaaagcataag
gaaaaattccaatttcttctaagcgcgctacatcataatttcgaaaatattaaacaggat
aagcttaaactttataaattcttcattattattgctaagtatatcaagcacaatgagcag
tttttcaaagacattttagttacctatccaatgaaaacattattcatagactatataaat
ttagcgagagattactatcaacaaattatgaatgactatagtactacagtaaccaataaa
cagctttatgttacatatatcataggcggtcaagctggggtgtttattaattggctttcg
aatggttgtaatgaatcacctgaagaagttgctgacattttattggctaatacgattaaa
cttcaaaactaa


  DNA with Flanking Sequence

>fig|451515.3.peg.2456 TetR family regulatory protein of MDR cluster
gctgttacatataaatcatctaaattgtatgcataagcgattgggttaccagcttgcacc
attgaaccttccataccatctaatttggcaattgtacctttttgaggcattttaagatcc
atatctttcgtttcgccatcttgaccttgtacagtaacaattgctactttgtcaccttta
tcgagtttgtcaccttgtttaacattaagtgatttaatttgtccagatgcaggacttgct
attttaatttgatcgccatttacttttgcattatcagttgttacatagcttgttgtttta
ttccaaaaataaaagccagcaatcccaattgctaacagtacaacaaccgtaatgacatta
attaatatcatctttttcatgaaacatttcctcctatttgcttttaaaattcactttatt
tattatagagacatgataactaaaaaaacaccaacaatttttataagagtgttggttaaa
attcacaaaggtgtaacaatatgaaacgacaagccaaaatagaaattcaaaacgcacttg
ttgatttgatggctgaatatccttttcaagaaatatccactaaaatgatttgcgcgtatt
gtaatattaatcgttctactttttatgattattacaaagataaatttgatttattggata
ccatcaactcaaagcataaggaaaaattccaatttcttctaagcgcgctacatcataatt
tcgaaaatattaaacaggataagcttaaactttataaattcttcattattattgctaagt
atatcaagcacaatgagcagtttttcaaagacattttagttacctatccaatgaaaacat
tattcatagactatataaatttagcgagagattactatcaacaaattatgaatgactata
gtactacagtaaccaataaacagctttatgttacatatatcataggcggtcaagctgggg
tgtttattaattggctttcgaatggttgtaatgaatcacctgaagaagttgctgacattt
tattggctaatacgattaaacttcaaaactaataatacggtttcattctaataaagaaat
gctataaaacaactagataaagttaaaccaaatggatagataatagtacatatgtaacgg
tgctatcaatataaaaatgccgagatttccacataataatctcggcatttttatttttga
tgctaaattcataggtctatgaatagctcaagttttgttttttaatttttcaattcaata
taatagaagaaactatgtttatcatcgatttgttttaaataccttcatattataaatctg
taaaataattaatataactgctgtagctataataataattatgtaaggtataggattatc
ttcaccttttacccccactaatggcgatgcaacaccaccaaataaaaactgtactaaacc
taataaacttgatgaactccctctaccactactactttcatccatagctattgtaaaacc
aagtgtcgcaacacctgtcactggtgctattaaaatgataaatcctatcgct


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
GO:0003700       F:transcription factor activity
GO:0006350       P:transcription
GO:0006355       P:regulation of transcription, DNA-dependent
cmr|NT03SA2450 Staphylococcus aureus MW2     transcriptional regulator, tetR family
cmr|NT05SA2370 Staphylococcus aureus NCTC 8325     regulatory protein TetR family
cmr|NT09SA2256 Staphylococcus aureus subsp. aureus MSSA476     transcriptional regulator, TetR family, putative
cmr|SACOL2349 Staphylococcus aureus subsp. aureus COL     transcriptional regulator, TetR family
cmr|SAUSA300_2300 Staphylococcus aureus subsp. aureus USA300-FPR3757     transcriptional regulator, TetR family
dbj|BAB96140.1 Staphylococcus aureus subsp. aureus MW2     MW2275
dbj|BAF68527.1 Staphylococcus aureus subsp. aureus str. Newman     transcriptional regulator TetR family protein
emb|CAG44058.1 Staphylococcus aureus subsp. aureus MSSA476 EMBL   TetR family regulatory protein
fig|196620.1.peg.2275 Staphylococcus aureus subsp. aureus MW2 FIG   TetR family regulatory protein of MDR cluster
fig|196620.5.peg.2352 Staphylococcus aureus subsp. aureus MW2 FIG   TetR family regulatory protein of MDR cluster
fig|282459.1.peg.2224 Staphylococcus aureus subsp. aureus MSSA476 FIG   TetR family regulatory protein of MDR cluster
fig|282459.5.peg.2335 Staphylococcus aureus subsp. aureus MSSA476 FIG   TetR family regulatory protein of MDR cluster
fig|367830.3.peg.2587 Staphylococcus aureus subsp. aureus USA300 FIG   TetR family regulatory protein of MDR cluster
fig|426430.6.peg.2184 Staphylococcus aureus subsp. aureus str. Newman FIG   TetR family regulatory protein of MDR cluster
fig|426430.8.peg.2453 Staphylococcus aureus subsp. aureus str. Newman FIG   TetR family regulatory protein of MDR cluster
fig|450394.6.peg.1855 Staphylococcus aureus subsp. aureus USA300_TCH959 FIG   TetR family regulatory protein of MDR cluster
fig|451516.9.peg.2445 Staphylococcus aureus subsp. aureus USA300_TCH1516 FIG   TetR family regulatory protein of MDR cluster
fig|452948.4.peg.1203 Staphylococcus aureus 930918-3 FIG   TetR family regulatory protein of MDR cluster
fig|455227.3.peg.1837 Staphylococcus aureus D30 FIG   TetR family regulatory protein of MDR cluster
fig|546342.3.peg.1028 Staphylococcus aureus subsp. aureus str. JKD6008 FIG   TetR family regulatory protein of MDR cluster
fig|546343.3.peg.1317 Staphylococcus aureus subsp. aureus str. JKD6009 FIG   TetR family regulatory protein of MDR cluster
fig|548474.3.peg.522 Staphylococcus aureus subsp. aureus TCH130 FIG   TetR family regulatory protein of MDR cluster
fig|548475.3.peg.1815 Staphylococcus aureus subsp. aureus TCH70 FIG   TetR family regulatory protein of MDR cluster
fig|553567.3.peg.2131 Staphylococcus aureus A5948 FIG   TetR family regulatory protein of MDR cluster
fig|553590.4.peg.959 Staphylococcus aureus A9754 FIG   TetR family regulatory protein of MDR cluster
fig|553594.3.peg.2112 Staphylococcus aureus A9765 FIG   TetR family regulatory protein of MDR cluster
fig|644279.4.peg.2497 Staphylococcus aureus subsp. aureus 132 FIG   TetR family regulatory protein of MDR cluster
fig|762962.3.peg.2155 Staphylococcus aureus subsp. aureus ATCC 51811 FIG   TetR family regulatory protein of MDR cluster
fig|93061.3.peg.2484 Staphylococcus aureus subsp. aureus NCTC 8325 FIG   TetR family regulatory protein of MDR cluster
fig|93061.5.peg.2380 Staphylococcus aureus subsp. aureus NCTC 8325 FIG   TetR family regulatory protein of MDR cluster
fig|93062.19.peg.2295 Staphylococcus aureus subsp. aureus COL FIG   TetR family regulatory protein of MDR cluster
fig|93062.4.peg.2409 Staphylococcus aureus subsp. aureus COL FIG   TetR family regulatory protein of MDR cluster
gb|AAW37177.1 Staphylococcus aureus subsp. aureus COL     transcriptional regulator, TetR family
gb|ABD22810.1 Staphylococcus aureus subsp. aureus USA300_FPR3757     transcriptional regulator, TetR family
gb|ABD31640.1 Staphylococcus aureus subsp. aureus NCTC 8325     conserved hypothetical protein
gb|ABX30328.1 Staphylococcus aureus subsp. aureus USA300_TCH1516     TetR family transcriptional regulator
gb|EES56054.1 Staphylococcus aureus subsp. aureus TCH70     TetR family transcriptional regulator
gb|EES94967.1 Staphylococcus aureus subsp. aureus USA300_TCH959     TetR family transcriptional regulator
gb|EES96655.1 Staphylococcus aureus subsp. aureus TCH130     TetR family transcriptional regulator
gb|EEV82543.1 Staphylococcus aureus A5948     transcriptional regulator TetR family protein
gi|150375267 Staphylococcus aureus subsp. aureus str. Newman NCBI   transcriptional regulator TetR family protein
gi|151222467 Staphylococcus aureus subsp. aureus str. Newman NCBI   transcriptional regulator TetR family protein
gi|160369357 Staphylococcus aureus subsp. aureus USA300_TCH1516 NCBI   TetR family transcriptional regulator
gi|161510548 Staphylococcus aureus subsp. aureus USA300_TCH1516 NCBI   TetR family transcriptional regulator
gi|21205447 Staphylococcus aureus subsp. aureus MW2 NCBI   MW2275
gi|21284004 Staphylococcus aureus subsp. aureus MW2 NCBI   hypothetical protein MW2275
gi|221138036 Staphylococcus aureus subsp. aureus str. JKD6008 NCBI   TetR family transcriptional regulator
gi|221141287 Staphylococcus aureus subsp. aureus str. JKD6009 NCBI   TetR family transcriptional regulator
gi|251803397 Staphylococcus aureus subsp. aureus TCH70 NCBI   TetR family transcriptional regulator
gi|251813214 Staphylococcus aureus subsp. aureus TCH70 NCBI   TetR family transcriptional regulator
gi|253726238 Staphylococcus aureus subsp. aureus USA300_TCH959 NCBI   TetR family transcriptional regulator
gi|253727926 Staphylococcus aureus subsp. aureus TCH130 NCBI   TetR family transcriptional regulator
gi|253730025 Staphylococcus aureus subsp. aureus USA300_TCH959 NCBI   TetR family transcriptional regulator
gi|253734231 Staphylococcus aureus subsp. aureus TCH130 NCBI   TetR family transcriptional regulator
gi|257859699 Staphylococcus aureus A5948 NCBI   transcriptional regulator TetR family protein
gi|258452627 Staphylococcus aureus A5948 NCBI   transcriptional regulator TetR family protein
gi|49245580 Staphylococcus aureus subsp. aureus MSSA476 NCBI   TetR family regulatory protein
gi|49487137 Staphylococcus aureus subsp. aureus MSSA476 NCBI   TetR family regulatory protein
gi|57285083 Staphylococcus aureus subsp. aureus COL NCBI   transcriptional regulator, TetR family
gi|57650897 Staphylococcus aureus subsp. aureus COL NCBI   TetR family transcriptional regulator
gi|87128296 Staphylococcus aureus subsp. aureus USA300_FPR3757 NCBI   transcriptional regulator, TetR family
gi|87162322 Staphylococcus aureus subsp. aureus USA300_FPR3757 NCBI   TetR family transcriptional regulator
gi|87203830 Staphylococcus aureus subsp. aureus NCTC 8325 NCBI   conserved hypothetical protein
gi|88196272 Staphylococcus aureus subsp. aureus NCTC 8325 NCBI   hypothetical protein SAOUHSC_02631
img|637153108 Staphylococcus aureus aureus COL IMG   transcriptional regulator, TetR family
img|637158515 Staphylococcus aureus aureus MSSA476 IMG   TetR family regulatory protein
img|637300092 Staphylococcus aureus aureus MW2 IMG   hypothetical protein
img|637888943 Staphylococcus aureus aureus USA300 IMG   transcriptional regulator, TetR family
img|637895241 Staphylococcus aureus aureus NCTC 8325 IMG   hypothetical protein
img|640796686 Staphylococcus aureus aureus Newman IMG   transcriptional regulator TetR family protein
img|641310342 Staphylococcus aureus subsp. aureus USA300_TCH1516 IMG   TetR family transcriptional regulator
img|641773184 Staphylococcus aureus aureus USA300_TCH959 IMG   TetR family transcriptional regulator
kegg|saa:SAUSA300_2300 Staphylococcus aureus subsp. aureus USA300_FPR3757 KEGG   TetR family transcriptional regulator
kegg|sac:SACOL2349 Staphylococcus aureus subsp. aureus COL KEGG   TetR family transcriptional regulator
kegg|sae:NWMN_2255 Staphylococcus aureus subsp. aureus Newman KEGG   transcriptional regulator TetR family protein
kegg|sam:MW2275 Staphylococcus aureus subsp. aureus MW2 KEGG   hypothetical protein
kegg|sao:SAOUHSC_02631 Staphylococcus aureus subsp. aureus NCTC 8325 KEGG   hypothetical protein
kegg|sas:SAS2245   KEGG   TetR family regulatory protein
kegg|sax:USA300HOU_2336 Staphylococcus aureus subsp. aureus USA300_TCH1516 KEGG   TetR family transcriptional regulator
ref|NP_647092.1 Staphylococcus aureus subsp. aureus MW2 RefSeq   hypothetical protein MW2275
ref|YP_001333289.1 Staphylococcus aureus subsp. aureus str. Newman RefSeq   transcriptional regulator TetR family protein
ref|YP_001576207.1 Staphylococcus aureus subsp. aureus USA300_TCH1516 RefSeq   TetR family transcriptional regulator
ref|YP_044358.1 Staphylococcus aureus subsp. aureus MSSA476 RefSeq   TetR family regulatory protein
ref|YP_187155.1 Staphylococcus aureus subsp. aureus COL RefSeq   TetR family transcriptional regulator
ref|YP_494935.1 Staphylococcus aureus subsp. aureus USA300_FPR3757 RefSeq   TetR family transcriptional regulator
ref|YP_501092.1 Staphylococcus aureus subsp. aureus NCTC 8325 RefSeq   hypothetical protein SAOUHSC_02631
ref|ZP_03562838.1 Staphylococcus aureus subsp. aureus str. JKD6008 RefSeq   TetR family transcriptional regulator
ref|ZP_03565780.1 Staphylococcus aureus subsp. aureus str. JKD6009 RefSeq   TetR family transcriptional regulator
ref|ZP_04827687.1 Staphylococcus aureus subsp. aureus TCH70 RefSeq   TetR family transcriptional regulator
ref|ZP_04864190.1 Staphylococcus aureus subsp. aureus USA300_TCH959 RefSeq   TetR family transcriptional regulator
ref|ZP_04868396.1 Staphylococcus aureus subsp. aureus TCH130 RefSeq   TetR family transcriptional regulator
ref|ZP_05700631.1 Staphylococcus aureus A5948 RefSeq   transcriptional regulator TetR family protein
tr|A6QJJ5 Staphylococcus aureus (strain Newman) TrEMBL   Transcriptional regulator TetR family protein
tr|A8Z545 Staphylococcus aureus (strain USA300 / TCH1516) TrEMBL   TetR family transcriptional regulator
tr|C5MZP8 Staphylococcus aureus subsp. aureus USA300_TCH959 TrEMBL   TetR family transcriptional regulator
tr|C5Q2M7 Staphylococcus aureus subsp. aureus TCH130 TrEMBL   TetR family transcriptional regulator
tr|C5QFX1 Staphylococcus aureus subsp. aureus TCH70 TrEMBL   TetR family transcriptional regulator
tr|Q2FEE3 Staphylococcus aureus (strain USA300) TrEMBL   Transcriptional regulator, TetR family
tr|Q2G2W4 Staphylococcus aureus (strain NCTC 8325) TrEMBL   Putative uncharacterized protein
tr|Q5HDK2 Staphylococcus aureus (strain COL) TrEMBL   Transcriptional regulator, TetR family
tr|Q6G6W6 Staphylococcus aureus (strain MSSA476) TrEMBL   TetR family regulatory protein
tr|Q8NV49 Staphylococcus aureus (strain MW2) TrEMBL   MW2275 protein


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  Functional Coupling

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  Attributes

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  Protein Families

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