Protein Page for fig|451515.3.peg.2456

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

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Protein fig|451515.3.peg.2456: Staphylococcus aureus subsp. aureus USA300_FPR3757

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NCBI Taxonomy Id: 451515

Current Assignment: TetR family regulatory protein of MDR cluster

Translate Function Assignments

Context on contig NC_007793 from base 2467214 to 2477963 (10750 bp)


Fid	Start	End	Size (nt)		Gap	SS	Ev	Function	Aliases
2451	2467214	2467633	420	+				FIG01107838: hypothetical protein	locus\|SAUSA300_2295, protein_id\|YP_494930.1, gi\|87159959, geneID\|3913846
2452	2468598	2467741	858	-	107	1: 4		putative esterase	locus\|SAUSA300_2296, protein_id\|YP_494931.1, gi\|87162082, geneID\|3914625
2453	2468869	2469507	639	+	270			FIG01108339: hypothetical protein	locus\|SAUSA300_2297, protein_id\|YP_494932.1, gi\|87162144, geneID\|3914691
2454	2471684	2469753	1932	-	245	1: 2		Membrane component of multidrug resistance system	locus\|SAUSA300_2298, protein_id\|YP_494933.1, gi\|87161734, geneID\|3913020
2455	2472344	2471697	648	-	12	1: 2		Multidrug resistance protein [function not yet clear]	locus\|SAUSA300_2299, protein_id\|YP_494934.1, gi\|87160414, geneID\|3913132
2456	2472465	2473016	552	+	120	1: 2		TetR family regulatory protein of MDR cluster	locus\|SAUSA300_2300, protein_id\|YP_494935.1, gi\|87162322, geneID\|3913456
2457	2474454	2473246	1209	-	229	1: 1	dlit(11042376)	Teicoplanin resistance transporter, TcaB family => TcaB	gene_name\|tcaB, locus\|SAUSA300_2301, protein_id\|YP_494936.1, gi\|87161925, geneID\|3914585
2458	2476105	2474723	1383	-	268	1: 1		Teicoplanin resistance associated membrane protein TcaA	gene_name\|tcaA, locus\|SAUSA300_2302, protein_id\|YP_494937.1, gi\|87161173, geneID\|3914747
2459	2476800	2476345	456	-	239	2: 1 3	dlit(11042376) dlit(15060048)	Teicoplanin-resistance associated HTH-type transcriptional regulator TcaR	gene_name\|tcaR, locus\|SAUSA300_2303, protein_id\|YP_494938.1, gi\|87159885, geneID\|3914106
2460	2476995	2477963	969	+	194			Integral membrane protein	locus\|SAUSA300_2304, protein_id\|YP_494939.1, gi\|87162083, geneID\|3914626

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Subsystems in Which This Protein Plays a Role


Subsystem	Curator	Role
Multidrug_Resistance,_2-protein_version_Found_in_Gram-positive_bacteria	RossO	TetR family regulatory protein of MDR cluster

Protein Sequence

>fig|451515.3.peg.2456 TetR family regulatory protein of MDR cluster
MKRQAKIEIQNALVDLMAEYPFQEISTKMICAYCNINRSTFYDYYKDKFDLLDTINSKHK
EKFQFLLSALHHNFENIKQDKLKLYKFFIIIAKYIKHNEQFFKDILVTYPMKTLFIDYIN
LARDYYQQIMNDYSTTVTNKQLYVTYIIGGQAGVFINWLSNGCNESPEEVADILLANTIK
LQN

MD5 = 21f90bc5ff4d2057870406b9f4b2d7ed

DNA Sequence

>fig|451515.3.peg.2456 TetR family regulatory protein of MDR cluster
atgaaacgacaagccaaaatagaaattcaaaacgcacttgttgatttgatggctgaatat
ccttttcaagaaatatccactaaaatgatttgcgcgtattgtaatattaatcgttctact
ttttatgattattacaaagataaatttgatttattggataccatcaactcaaagcataag
gaaaaattccaatttcttctaagcgcgctacatcataatttcgaaaatattaaacaggat
aagcttaaactttataaattcttcattattattgctaagtatatcaagcacaatgagcag
tttttcaaagacattttagttacctatccaatgaaaacattattcatagactatataaat
ttagcgagagattactatcaacaaattatgaatgactatagtactacagtaaccaataaa
cagctttatgttacatatatcataggcggtcaagctggggtgtttattaattggctttcg
aatggttgtaatgaatcacctgaagaagttgctgacattttattggctaatacgattaaa
cttcaaaactaa

DNA with Flanking Sequence

>fig|451515.3.peg.2456 TetR family regulatory protein of MDR cluster
gctgttacatataaatcatctaaattgtatgcataagcgattgggttaccagcttgcacc
attgaaccttccataccatctaatttggcaattgtacctttttgaggcattttaagatcc
atatctttcgtttcgccatcttgaccttgtacagtaacaattgctactttgtcaccttta
tcgagtttgtcaccttgtttaacattaagtgatttaatttgtccagatgcaggacttgct
attttaatttgatcgccatttacttttgcattatcagttgttacatagcttgttgtttta
ttccaaaaataaaagccagcaatcccaattgctaacagtacaacaaccgtaatgacatta
attaatatcatctttttcatgaaacatttcctcctatttgcttttaaaattcactttatt
tattatagagacatgataactaaaaaaacaccaacaatttttataagagtgttggttaaa
attcacaaaggtgtaacaatatgaaacgacaagccaaaatagaaattcaaaacgcacttg
ttgatttgatggctgaatatccttttcaagaaatatccactaaaatgatttgcgcgtatt
gtaatattaatcgttctactttttatgattattacaaagataaatttgatttattggata
ccatcaactcaaagcataaggaaaaattccaatttcttctaagcgcgctacatcataatt
tcgaaaatattaaacaggataagcttaaactttataaattcttcattattattgctaagt
atatcaagcacaatgagcagtttttcaaagacattttagttacctatccaatgaaaacat
tattcatagactatataaatttagcgagagattactatcaacaaattatgaatgactata
gtactacagtaaccaataaacagctttatgttacatatatcataggcggtcaagctgggg
tgtttattaattggctttcgaatggttgtaatgaatcacctgaagaagttgctgacattt
tattggctaatacgattaaacttcaaaactaataatacggtttcattctaataaagaaat
gctataaaacaactagataaagttaaaccaaatggatagataatagtacatatgtaacgg
tgctatcaatataaaaatgccgagatttccacataataatctcggcatttttatttttga
tgctaaattcataggtctatgaatagctcaagttttgttttttaatttttcaattcaata
taatagaagaaactatgtttatcatcgatttgttttaaataccttcatattataaatctg
taaaataattaatataactgctgtagctataataataattatgtaaggtataggattatc
ttcaccttttacccccactaatggcgatgcaacaccaccaaataaaaactgtactaaacc
taataaacttgatgaactccctctaccactactactttcatccatagctattgtaaaacc
aagtgtcgcaacacctgtcactggtgctattaaaatgataaatcctatcgct

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