Protein Page for fig|451515.3.peg.2455

SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov

FIG search

Protein fig|451515.3.peg.2455: Staphylococcus aureus subsp. aureus USA300_FPR3757

This feature in The SEED Viewer

NCBI Taxonomy Id: 451515

Current Assignment: Multidrug resistance protein [function not yet clear]

Translate Function Assignments

Context on contig NC_007793 from base 2466726 to 2477963 (11238 bp)


Fid	Start	End	Size (nt)		Gap	Fc-sc	SS	Ev	Function	Aliases
2450	2466726	2467217	492	+			7: 3 8 6 9 5 4 7		3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	locus\|SAUSA300_2294, protein_id\|YP_494929.1, gi\|87160947, geneID\|3913787
2451	2467214	2467633	420	+	-4				FIG01107838: hypothetical protein	locus\|SAUSA300_2295, protein_id\|YP_494930.1, gi\|87159959, geneID\|3913846
2452	2468598	2467741	858	-	107		1: 11		putative esterase	locus\|SAUSA300_2296, protein_id\|YP_494931.1, gi\|87162082, geneID\|3914625
2453	2468869	2469507	639	+	270				FIG01108339: hypothetical protein	locus\|SAUSA300_2297, protein_id\|YP_494932.1, gi\|87162144, geneID\|3914691
2454	2471684	2469753	1932	-	245	10	1: 1		Membrane component of multidrug resistance system	locus\|SAUSA300_2298, protein_id\|YP_494933.1, gi\|87161734, geneID\|3913020
2455	2472344	2471697	648	-	12		1: 1		Multidrug resistance protein [function not yet clear]	locus\|SAUSA300_2299, protein_id\|YP_494934.1, gi\|87160414, geneID\|3913132
2456	2472465	2473016	552	+	120		1: 1		TetR family regulatory protein of MDR cluster	locus\|SAUSA300_2300, protein_id\|YP_494935.1, gi\|87162322, geneID\|3913456
2457	2474454	2473246	1209	-	229		1: 2	dlit(11042376)	Teicoplanin resistance transporter, TcaB family => TcaB	gene_name\|tcaB, locus\|SAUSA300_2301, protein_id\|YP_494936.1, gi\|87161925, geneID\|3914585
2458	2476105	2474723	1383	-	268		1: 2		Teicoplanin resistance associated membrane protein TcaA	gene_name\|tcaA, locus\|SAUSA300_2302, protein_id\|YP_494937.1, gi\|87161173, geneID\|3914747
2459	2476800	2476345	456	-	239		2: 2 10	dlit(11042376) dlit(15060048)	Teicoplanin-resistance associated HTH-type transcriptional regulator TcaR	gene_name\|tcaR, locus\|SAUSA300_2303, protein_id\|YP_494938.1, gi\|87159885, geneID\|3914106
2460	2476995	2477963	969	+	194				Integral membrane protein	locus\|SAUSA300_2304, protein_id\|YP_494939.1, gi\|87162083, geneID\|3914626

Annotation History / View All Related Annotations

Help on Annotations

Subsystems in Which This Protein Plays a Role


Subsystem	Curator	Role
Multidrug_Resistance,_2-protein_version_Found_in_Gram-positive_bacteria	RossO	Multidrug resistance protein [function not yet clear]

Protein Sequence

>fig|451515.3.peg.2455 Multidrug resistance protein [function not yet clear]
MKKMILINVITVVVLLAIGIAGFYFWNKTTSYVTTDNAKVNGDQIKIASPASGQIKSLNV
KQGDKLDKGDKVAIVTVQGQDGETKDMDLKMPQKGTIAKLDGMEGSMVQAGNPIAYAYNL
DDLYVTANIDEKDIKDVEVGKDVDVTIDGQKASIKGKVDSIGKATAASFSLMPSSNSDGN
YTKVSQVIPVKITLESEPSKQVVPGMNAEVKIHKN

MD5 = 52a41c49f0b6ea9dc693715659bcdf60

DNA Sequence

>fig|451515.3.peg.2455 Multidrug resistance protein [function not yet clear]
atgaaaaagatgatattaattaatgtcattacggttgttgtactgttagcaattgggatt
gctggcttttatttttggaataaaacaacaagctatgtaacaactgataatgcaaaagta
aatggcgatcaaattaaaatagcaagtcctgcatctggacaaattaaatcacttaatgtt
aaacaaggtgacaaactcgataaaggtgacaaagtagcaattgttactgtacaaggtcaa
gatggcgaaacgaaagatatggatcttaaaatgcctcaaaaaggtacaattgccaaatta
gatggtatggaaggttcaatggtgcaagctggtaacccaatcgcttatgcatacaattta
gatgatttatatgtaacagcaaatattgacgaaaaagatattaaagatgttgaagtaggt
aaagatgttgatgtgactattgacggtcaaaaagcttctattaaaggtaaagttgatagt
attggaaaagcaactgctgcaagcttttcattaatgccatcatcaaatagtgatggtaac
tacactaaagtttctcaagtaatacctgttaaaatcactctagaatcagaaccgtctaaa
caagttgttcctggaatgaacgctgaagtaaaaatccataaaaattaa

DNA with Flanking Sequence

>fig|451515.3.peg.2455 Multidrug resistance protein [function not yet clear]
tgatagtaatctctcgctaaatttatatagtctatgaataatgttttcattggataggta
actaaaatgtctttgaaaaactgctcattgtgcttgatatacttagcaataataatgaag
aatttataaagtttaagcttatcctgtttaatattttcgaaattatgatgtagcgcgctt
agaagaaattggaatttttccttatgctttgagttgatggtatccaataaatcaaattta
tctttgtaataatcataaaaagtagaacgattaatattacaatacgcgcaaatcatttta
gtggatatttcttgaaaaggatattcagccatcaaatcaacaagtgcgttttgaatttct
attttggcttgtcgtttcatattgttacacctttgtgaattttaaccaacactcttataa
aaattgttggtgtttttttagttatcatgtctctataataaataaagtgaattttaaaag
caaataggaggaaatgtttcatgaaaaagatgatattaattaatgtcattacggttgttg
tactgttagcaattgggattgctggcttttatttttggaataaaacaacaagctatgtaa
caactgataatgcaaaagtaaatggcgatcaaattaaaatagcaagtcctgcatctggac
aaattaaatcacttaatgttaaacaaggtgacaaactcgataaaggtgacaaagtagcaa
ttgttactgtacaaggtcaagatggcgaaacgaaagatatggatcttaaaatgcctcaaa
aaggtacaattgccaaattagatggtatggaaggttcaatggtgcaagctggtaacccaa
tcgcttatgcatacaatttagatgatttatatgtaacagcaaatattgacgaaaaagata
ttaaagatgttgaagtaggtaaagatgttgatgtgactattgacggtcaaaaagcttcta
ttaaaggtaaagttgatagtattggaaaagcaactgctgcaagcttttcattaatgccat
catcaaatagtgatggtaactacactaaagtttctcaagtaatacctgttaaaatcactc
tagaatcagaaccgtctaaacaagttgttcctggaatgaacgctgaagtaaaaatccata
aaaattaagggggtcattaaatgactacgaccttcattattagctacattattttagcgc
tcattattgttggggttatcaatttatttttaataagatcaagaaaaaaaggcaaacgcc
aacaaaaggaacaacaatttacgacacgtcaatcaaatcaatctaaatttaaagctagtg
atttagacaaaacaactgatcaatcgacacaacgtatgacgcatgaagagttgcgtgttg
acaatcaagatgatcatagccaagttagtctaaatggttacacaaaggggtctgagaaag
atcaagaagcattcactaataataaggatgaggaagcagttgctgctaaaaatcctgaat
cagaagaatataaagtgaatgaaaaaataaaaaaagaacataaaaactttatttttggtg
aaggtgtttcacgcggtaaaatattagcggcattattattcggtatgtttattgcgattt
taaaccaaacattattaaatgttgcttt

  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
add a new link

  Functional Coupling


Score	Peg	Function
10	fig\|451515.3.peg.2454	Membrane component of multidrug resistance system

Attributes

Help on Attributes


Key Link Explains Key	Value

Protein Families

No protein families found

Compare Regions

Compared Regions in SeedViewer

Similarities

Help with SEED similarities options

> Show tool descriptions

FIG search