Protein Page for fig|451515.3.peg.2454

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

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Protein fig|451515.3.peg.2454: Staphylococcus aureus subsp. aureus USA300_FPR3757

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NCBI Taxonomy Id: 451515

Current Assignment: Membrane component of multidrug resistance system

Translate Function Assignments

Context on contig NC_007793 from base 2464602 to 2476800 (12199 bp)


Fid	Start	End	Size (nt)		Gap	Fc-sc	SS	Ev	Function	Aliases
2448	2465651	2464602	1050	-			4: 9 6 7 8		Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2)	gene_name\|fni, locus\|SAUSA300_2292, protein_id\|YP_494927.1, gi\|87160251, geneID\|3915142
2449	2466629	2465682	948	-	30		1: 5		Magnesium and cobalt transport protein CorA	gene_name\|corA, locus\|SAUSA300_2293, protein_id\|YP_494928.1, gi\|87161343, geneID\|3912860
2450	2466726	2467217	492	+	96		7: 16 12 11 14 3 10 15		3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)	locus\|SAUSA300_2294, protein_id\|YP_494929.1, gi\|87160947, geneID\|3913787
2451	2467214	2467633	420	+	-4				FIG01107838: hypothetical protein	locus\|SAUSA300_2295, protein_id\|YP_494930.1, gi\|87159959, geneID\|3913846
2452	2468598	2467741	858	-	107		1: 4		putative esterase	locus\|SAUSA300_2296, protein_id\|YP_494931.1, gi\|87162082, geneID\|3914625
2453	2468869	2469507	639	+	270				FIG01108339: hypothetical protein	locus\|SAUSA300_2297, protein_id\|YP_494932.1, gi\|87162144, geneID\|3914691
2454	2471684	2469753	1932	-	245		1: 1		Membrane component of multidrug resistance system	locus\|SAUSA300_2298, protein_id\|YP_494933.1, gi\|87161734, geneID\|3913020
2455	2472344	2471697	648	-	12	11	1: 1		Multidrug resistance protein [function not yet clear]	locus\|SAUSA300_2299, protein_id\|YP_494934.1, gi\|87160414, geneID\|3913132
2456	2472465	2473016	552	+	120		1: 1		TetR family regulatory protein of MDR cluster	locus\|SAUSA300_2300, protein_id\|YP_494935.1, gi\|87162322, geneID\|3913456
2457	2474454	2473246	1209	-	229		1: 2	dlit(11042376)	Teicoplanin resistance transporter, TcaB family => TcaB	gene_name\|tcaB, locus\|SAUSA300_2301, protein_id\|YP_494936.1, gi\|87161925, geneID\|3914585
2458	2476105	2474723	1383	-	268		1: 2		Teicoplanin resistance associated membrane protein TcaA	gene_name\|tcaA, locus\|SAUSA300_2302, protein_id\|YP_494937.1, gi\|87161173, geneID\|3914747
2459	2476800	2476345	456	-	239		2: 2 13	dlit(11042376) dlit(15060048)	Teicoplanin-resistance associated HTH-type transcriptional regulator TcaR	gene_name\|tcaR, locus\|SAUSA300_2303, protein_id\|YP_494938.1, gi\|87159885, geneID\|3914106

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Subsystems in Which This Protein Plays a Role


Subsystem	Curator	Role
Multidrug_Resistance,_2-protein_version_Found_in_Gram-positive_bacteria	RossO	Membrane component of multidrug resistance system

Protein Sequence

>fig|451515.3.peg.2454 Membrane component of multidrug resistance system
MTTTFIISYIILALIIVGVINLFLIRSRKKGKRQQKEQQFTTRQSNQSKFKASDLDKTTD
QSTQRMTHEELRVDNQDDHSQVSLNGYTKGSEKDQEAFTNNKDEEAVAAKNPESEEYKVN
EKIKKEHKNFIFGEGVSRGKILAALLFGMFIAILNQTLLNVALPKINTEFNISASTGQWL
MTGFMLVNGILIPITAYLFNKYSYRKLFLVALVLFTIGSLICAISMNFPIMMVGRVLQAI
GAGVLMPLGSIVIITIYPPEKRGAAMGTMGIAMILAPAIGPTLSGYIVQNYHWNVMFYGM
FIIGIIAILIGFVWFKLYQYTTNPKADIPGIIFSTIGFGALLYGFSEAGNKGWGSVEIET
MFAIGIIFIILFVIRELRMKSPMLNLEVLKFPTFTLTTIINMVVMLSLYGGMILLPIYLQ
NLRGFSALDSGLLLLPGSLIMGLLGPFAGKLLDTIGLKPLAIFGIAVMTYATWELTKLNM
DTPYMTIMGIYVLRSFGMAFIMMPMVTAAINALPGRLASHGNAFLNTMRQLAGSIGTAIL
VTVMTTQTTQHLSAFGEELDKTNPVVQDHMHELASQYGGQEGAMKVLLQFVNKLATVEGI
NDAFIVATIFSIIALILCLFLQSNKKAKATAQKLDADNSINHE

MD5 = 18022c3716b4b802fe53ef8629803c1e

DNA Sequence

>fig|451515.3.peg.2454 Membrane component of multidrug resistance system
atgactacgaccttcattattagctacattattttagcgctcattattgttggggttatc
aatttatttttaataagatcaagaaaaaaaggcaaacgccaacaaaaggaacaacaattt
acgacacgtcaatcaaatcaatctaaatttaaagctagtgatttagacaaaacaactgat
caatcgacacaacgtatgacgcatgaagagttgcgtgttgacaatcaagatgatcatagc
caagttagtctaaatggttacacaaaggggtctgagaaagatcaagaagcattcactaat
aataaggatgaggaagcagttgctgctaaaaatcctgaatcagaagaatataaagtgaat
gaaaaaataaaaaaagaacataaaaactttatttttggtgaaggtgtttcacgcggtaaa
atattagcggcattattattcggtatgtttattgcgattttaaaccaaacattattaaat
gttgctttaccaaaaattaatacggaatttaatatttctgcgtcaacagggcaatggttg
atgacgggattcatgttagtaaacggtattttaataccaattacggcgtatctatttaat
aaatattcatatcgaaaattatttttagttgcgttagtactctttacaattggttcatta
atctgtgcgatttcaatgaatttcccaatcatgatggttggacgtgtattacaagccatt
ggtgcaggtgtactaatgccattaggttcaattgttattattacaatttatccacctgaa
aaacgtggtgctgccatgggtacaatgggtatcgcaatgattttagcacctgcaattggt
ccaacattatcaggttatattgtacaaaattaccattggaatgtgatgttttacggtatg
ttcattatcgggattatcgctattttaattggttttgtatggtttaagttatatcaatat
acaacaaaccctaaagctgatatcccaggtatcatttttagtacgattggttttggtgct
ttgttatatggtttctcagaagctggcaacaaaggttggggttcagtagagatagaaaca
atgtttgcgattggtattatctttattattctattcgttattagagaattaagaatgaaa
tcaccaatgttgaatttagaagtattgaaattcccaacatttacattaacaacaattatt
aatatggttgtaatgttaagtttatatggtggtatgattttattaccgatttatttacaa
aatttacgcggattctcagcattagattccggattgttattattacctggttctctaatt
atgggtctactaggaccatttgcaggtaaattgttagatactattggtttaaaaccatta
gctatctttggtattgctgtaatgacttatgcaacatgggaattaactaaattaaatatg
gatacaccatatatgacaatcatgggtatctatgtacttcgttcatttggtatggcattt
ataatgatgccaatggtaactgcagctattaatgcgttaccgggacgacttgcctctcat
ggtaatgctttcttaaatacgatgcgtcaattagcaggctctataggtacagcaatctta
gttactgtaatgacaacacaaactacacaacacttatcagcttttggggaagagttagat
aaaacgaatcctgttgtacaagatcatatgcatgaattagcatcacaatatggcggacaa
gaaggcgcaatgaaagtgttactacaatttgtaaataaactagcaacggttgaaggtatt
aatgatgcatttatagttgcaacgatatttagcatcatcgccttaattttatgtttattt
ttacaaagtaataaaaaagcaaaagctacagctcaaaagttagatgcagataatagtatc
aatcatgaataa

DNA with Flanking Sequence

>fig|451515.3.peg.2454 Membrane component of multidrug resistance system
aaattaaatcacttaatgttaaacaaggtgacaaactcgataaaggtgacaaagtagcaa
ttgttactgtacaaggtcaagatggcgaaacgaaagatatggatcttaaaatgcctcaaa
aaggtacaattgccaaattagatggtatggaaggttcaatggtgcaagctggtaacccaa
tcgcttatgcatacaatttagatgatttatatgtaacagcaaatattgacgaaaaagata
ttaaagatgttgaagtaggtaaagatgttgatgtgactattgacggtcaaaaagcttcta
ttaaaggtaaagttgatagtattggaaaagcaactgctgcaagcttttcattaatgccat
catcaaatagtgatggtaactacactaaagtttctcaagtaatacctgttaaaatcactc
tagaatcagaaccgtctaaacaagttgttcctggaatgaacgctgaagtaaaaatccata
aaaattaagggggtcattaaatgactacgaccttcattattagctacattattttagcgc
tcattattgttggggttatcaatttatttttaataagatcaagaaaaaaaggcaaacgcc
aacaaaaggaacaacaatttacgacacgtcaatcaaatcaatctaaatttaaagctagtg
atttagacaaaacaactgatcaatcgacacaacgtatgacgcatgaagagttgcgtgttg
acaatcaagatgatcatagccaagttagtctaaatggttacacaaaggggtctgagaaag
atcaagaagcattcactaataataaggatgaggaagcagttgctgctaaaaatcctgaat
cagaagaatataaagtgaatgaaaaaataaaaaaagaacataaaaactttatttttggtg
aaggtgtttcacgcggtaaaatattagcggcattattattcggtatgtttattgcgattt
taaaccaaacattattaaatgttgctttaccaaaaattaatacggaatttaatatttctg
cgtcaacagggcaatggttgatgacgggattcatgttagtaaacggtattttaataccaa
ttacggcgtatctatttaataaatattcatatcgaaaattatttttagttgcgttagtac
tctttacaattggttcattaatctgtgcgatttcaatgaatttcccaatcatgatggttg
gacgtgtattacaagccattggtgcaggtgtactaatgccattaggttcaattgttatta
ttacaatttatccacctgaaaaacgtggtgctgccatgggtacaatgggtatcgcaatga
ttttagcacctgcaattggtccaacattatcaggttatattgtacaaaattaccattgga
atgtgatgttttacggtatgttcattatcgggattatcgctattttaattggttttgtat
ggtttaagttatatcaatatacaacaaaccctaaagctgatatcccaggtatcattttta
gtacgattggttttggtgctttgttatatggtttctcagaagctggcaacaaaggttggg
gttcagtagagatagaaacaatgtttgcgattggtattatctttattattctattcgtta
ttagagaattaagaatgaaatcaccaatgttgaatttagaagtattgaaattcccaacat
ttacattaacaacaattattaatatggttgtaatgttaagtttatatggtggtatgattt
tattaccgatttatttacaaaatttacgcggattctcagcattagattccggattgttat
tattacctggttctctaattatgggtctactaggaccatttgcaggtaaattgttagata
ctattggtttaaaaccattagctatctttggtattgctgtaatgacttatgcaacatggg
aattaactaaattaaatatggatacaccatatatgacaatcatgggtatctatgtacttc
gttcatttggtatggcatttataatgatgccaatggtaactgcagctattaatgcgttac
cgggacgacttgcctctcatggtaatgctttcttaaatacgatgcgtcaattagcaggct
ctataggtacagcaatcttagttactgtaatgacaacacaaactacacaacacttatcag
cttttggggaagagttagataaaacgaatcctgttgtacaagatcatatgcatgaattag
catcacaatatggcggacaagaaggcgcaatgaaagtgttactacaatttgtaaataaac
tagcaacggttgaaggtattaatgatgcatttatagttgcaacgatatttagcatcatcg
ccttaattttatgtttatttttacaaagtaataaaaaagcaaaagctacagctcaaaagt
tagatgcagataatagtatcaatcatgaataaataaaataaattaattgaagtgtgacta
atcaaaaattatgttgtggggacatgatttttaaagtatcggtgccaaatatggttatcg
atactttttttatttgttgatttatagaatgttagaggaattatattaaaatttggcatt
gacgtagtaggtcattaataaagaaaaagcaggaagtgggtcaacgaaatgaattttgtg
aaaataacatttctgtcccaatccctactatataacattattttaaacgaggcatgcgat
tacggaagaataagcttataacaagtaaaccgatgctacagccaagtaaaatgatgccgt
tatgaatagcgtcagcttctgtaatcacttgatctggtggtacatttaaataatattttt
tgaaaacatctgcaatttcttgtgcgagtgctttaataatataactgaaatacaatgtaa
tgactaacataattgttaacactaaaatatttactacttttagaactgtgcg

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No essentially identical proteins found

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  Functional Coupling


Score	Peg	Function
11	fig\|451515.3.peg.2455	Multidrug resistance protein [function not yet clear]

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Protein Families

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