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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|451515.3.peg.2445: Staphylococcus aureus subsp. aureus USA300_FPR3757

This feature in The SEED Viewer

NCBI Taxonomy Id: 451515

Current Assignment: Doubtful CDS
Translate Function Assignments


Context on contig NC_007793 from base 2456518 to 2467633 (11116 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2437 2456518 2457171 654 +           Uncharacterized protein conserved in bacteria locus|SAUSA300_2284, protein_id|YP_494919.1, gi|87160599, geneID|3915218
2438 2457414 2457301 114 - 129         FIG01108134: hypothetical protein  
2439 2458426 2457407 1020 - -8         Aldose 1-epimerase (EC 5.1.3.3) gene_name|galM, locus|SAUSA300_2285, protein_id|YP_494920.1, gi|87161694, geneID|3914459
2440 2458782 2458456 327 - 29         Protein of unknown function UPF0060 locus|SAUSA300_2286, protein_id|YP_494921.1, gi|87162407, geneID|3915254
2441 2460232 2459000 1233 - 217         ABC-type Na+ efflux pump, permease component locus|SAUSA300_2287, protein_id|YP_494922.1, gi|87161971, geneID|3914483
2442 2461124 2460225 900 - -8         ABC transporter, ATP-binding protein locus|SAUSA300_2288, protein_id|YP_494923.1, gi|87161206, geneID|3912781
2443 2462002 2461355 648 - 230         FIG01108220: hypothetical protein locus|SAUSA300_2289, protein_id|YP_494924.1, gi|87162419, geneID|3915266
2444 2461994 2462116 123 + -9         Doubtful CDS  
2445 2462170 2462313 144 + 53         Doubtful CDS  
2446 2462401 2463009 609 + 87     1: 12   DNA-3-methyladenine glycosylase II (EC 3.2.2.21) locus|SAUSA300_2290, protein_id|YP_494925.1, gi|87160626, geneID|3915061
2447 2463346 2464554 1209 + 336         Sodium/glutamate symport protein gene_name|gltS, locus|SAUSA300_2291, protein_id|YP_494926.1, gi|87160999, geneID|3913565
2448 2465651 2464602 1050 - 47     4: 13 8 1 11   Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2) gene_name|fni, locus|SAUSA300_2292, protein_id|YP_494927.1, gi|87160251, geneID|3915142
2449 2466629 2465682 948 - 30     1: 7   Magnesium and cobalt transport protein CorA gene_name|corA, locus|SAUSA300_2293, protein_id|YP_494928.1, gi|87161343, geneID|3912860
2450 2466726 2467217 492 + 96     7: 2 9 5 10 3 4 6   3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) locus|SAUSA300_2294, protein_id|YP_494929.1, gi|87160947, geneID|3913787
2451 2467214 2467633 420 + -4         FIG01107838: hypothetical protein locus|SAUSA300_2295, protein_id|YP_494930.1, gi|87159959, geneID|3913846

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|451515.3.peg.2445 Doubtful CDS
METHLKVNASLTILKICHTAMFTFKRVSIYANKIFHNKVYTLHFYNS

MD5 = 79321253cc11ce32c718addf961f6de8


  DNA Sequence

>fig|451515.3.peg.2445 Doubtful CDS
atggagactcatttgaaagtcaacgcttcgttaactatactaaaaatatgtcatactgca
atgttcacgtttaaaagagtctcaatctatgcaaataaaatattccataacaaagtatat
actttacatttttataattcttaa


  DNA with Flanking Sequence

>fig|451515.3.peg.2445 Doubtful CDS
aaataacattgttcttgatatatcgtgaaatcttcgaacgcacaacgctaaatttggaat
aaacgttgccaaactatagacaaaagtatacacagatgtaaggataatcatcaatatact
cataactattaatgtttcgttatccgccgctatagaaataaagaatagaaataggtttat
tattagcacacacacagctggaaccataagtatcaaatgccatagtgccatataccaata
ttcactacgtcttgatctccccttaaaatttacataatttttccaaaataaaacgaatga
tttcataaaacctacttgaggtaattgttccattgtaatctccctttcgttaatcatatt
tatatttttaattattgttaccgttataatttacaagattcattatcaagccacttcatt
tcaatcgtcaatcactttggaaaatgaactttatatttcatcactagtaaaatgaaaacc
cgctacaagtacacatctatatggagactcatttgaaagtcaacgcttcgttaactatac
taaaaatatgtcatactgcaatgttcacgtttaaaagagtctcaatctatgcaaataaaa
tattccataacaaagtatatactttacatttttataattcttaacaatactattttatca
aacatttaccacaataaaaatatctttttcatttttatttaaattaatcatataattgcg
aggagaatattatggatttcgttaataatgatacaagacaaattgctaaaaacttattag
gtgtcaaagtgatttatcaggataccactcaaacgtatacaggctacatcgtggaaacgg
aagcttacttaggtttgaatgatcgtgcggctcatggctatggcggtaaaataacaccta
aagtcacgtcattatataaacgtggtggtacaatttatgcacatgtcatgcatacgcatt
tactcattaattttgtaacaaaatctgaaggtatacctgaaggcgtacttatccgcgcaa
ttgaaccagaagaaggtttatccgctatgttccgtaacagaggtaagaaaggctacgagg
taacgaatggcccaggaaaatggactaaggcatttaacattccacgggctatcgatggcg
ctac


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No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

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