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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|451515.3.peg.2440: Staphylococcus aureus subsp. aureus USA300_FPR3757

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NCBI Taxonomy Id: 451515

Current Assignment: Protein of unknown function UPF0060
Translate Function Assignments


Context on contig NC_007793 from base 2453108 to 2464554 (11447 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2434 2454043 2453108 936 -       4: 4 8 2 6   Formiminoglutamase (EC 3.5.3.8) gene_name|hutG, locus|SAUSA300_2281, protein_id|YP_494916.1, gi|87160628, geneID|3915063
2435 2454333 2455592 1260 + 289       dlit(16923896) Membrane protein SAV2335 locus|SAUSA300_2282, protein_id|YP_494917.1, gi|87161379, geneID|3914149
2436 2456344 2455658 687 - 65     3: 3 7 1   Ribose-5-phosphate isomerase A (EC 5.3.1.6) gene_name|rpiA, locus|SAUSA300_2283, protein_id|YP_494918.1, gi|87159890, geneID|3914936
2437 2456518 2457171 654 + 173         Uncharacterized protein conserved in bacteria locus|SAUSA300_2284, protein_id|YP_494919.1, gi|87160599, geneID|3915218
2438 2457414 2457301 114 - 129         FIG01108134: hypothetical protein  
2439 2458426 2457407 1020 - -8         Aldose 1-epimerase (EC 5.1.3.3) gene_name|galM, locus|SAUSA300_2285, protein_id|YP_494920.1, gi|87161694, geneID|3914459
2440 2458782 2458456 327 - 29         Protein of unknown function UPF0060 locus|SAUSA300_2286, protein_id|YP_494921.1, gi|87162407, geneID|3915254
2441 2460232 2459000 1233 - 217         ABC-type Na+ efflux pump, permease component locus|SAUSA300_2287, protein_id|YP_494922.1, gi|87161971, geneID|3914483
2442 2461124 2460225 900 - -8         ABC transporter, ATP-binding protein locus|SAUSA300_2288, protein_id|YP_494923.1, gi|87161206, geneID|3912781
2443 2462002 2461355 648 - 230         FIG01108220: hypothetical protein locus|SAUSA300_2289, protein_id|YP_494924.1, gi|87162419, geneID|3915266
2444 2461994 2462116 123 + -9         Doubtful CDS  
2445 2462170 2462313 144 + 53         Doubtful CDS  
2446 2462401 2463009 609 + 87     1: 5   DNA-3-methyladenine glycosylase II (EC 3.2.2.21) locus|SAUSA300_2290, protein_id|YP_494925.1, gi|87160626, geneID|3915061
2447 2463346 2464554 1209 + 336         Sodium/glutamate symport protein gene_name|gltS, locus|SAUSA300_2291, protein_id|YP_494926.1, gi|87160999, geneID|3913565

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|451515.3.peg.2440 Protein of unknown function UPF0060
MLYPIFIFILAGLCEIGGGYLIWLWLREGQSSLVGLIGGAILMLYGVIATFQSFPSFGRV
YAAYGGVFIIMSLIFAMVVDKQMPDKYDVIGAIICIVGVLVMLLPSRA

MD5 = 7338538bc8f877a9b6c669b8efa266e4


  DNA Sequence

>fig|451515.3.peg.2440 Protein of unknown function UPF0060
atgttatatccgatttttatatttatattagctggcttatgtgaaataggtgggggatac
ctgatttggctgtggcttagggaaggacagtcttcacttgttgggctaataggcggtgcg
atactcatgttatatggtgtcattgcgacatttcaatcatttccatcattcggaagagta
tatgcagcatatggtggcgtatttatcatcatgagtttgatttttgcgatggtcgtagat
aaacaaatgccagataaatatgatgttatcggtgcaatcatttgtattgtaggtgtttta
gtaatgttgctacccagcagagcttga


  DNA with Flanking Sequence

>fig|451515.3.peg.2440 Protein of unknown function UPF0060
attacttggtatgattgcattttatatcgcgatattcacgataaataatcctgatggaca
acttgctttaatcacaagttatattccgtttttagcgccatttcaattagttgtacgcgc
tcaaacttcagggcttcaaatatatgaggtcatcttaagttctttaatctcaattgtaat
ggtagctgtcttgatatggattgcaattaaaacatataaagattcagtacttacatttga
acgtggcttatttaattcaatgaaacgtgtatttaaaaaataaaattgatgagagtgaca
cacatttatcatataaaatgatgatgaaagcgtgttactcttatttttttatatttagct
atagaataatgtctaaaaaagtgtacaatatgaatgtgaaaacgaactttttaaaatggg
aatgtgaagtaagaagaaatgtaaacaaatgatatgtagccgatagattattgatagcaa
atgtgtgatggagtgatttcatgttatatccgatttttatatttatattagctggcttat
gtgaaataggtgggggatacctgatttggctgtggcttagggaaggacagtcttcacttg
ttgggctaataggcggtgcgatactcatgttatatggtgtcattgcgacatttcaatcat
ttccatcattcggaagagtatatgcagcatatggtggcgtatttatcatcatgagtttga
tttttgcgatggtcgtagataaacaaatgccagataaatatgatgttatcggtgcaatca
tttgtattgtaggtgttttagtaatgttgctacccagcagagcttgaacacttgtggtta
gaagggagaagtaaaaatgatagttgaagttgagcaccaaagacaaggtgtagatttaat
caaaattgataatgatgaaactaaaattatttttacgaattatggagcaagagtagtgtc
ttggaaatatcatgataataatattgttcttggaaatgttgttgaagcggatgaatttta
tcatagtaatccttttaaatttggtgcttctataggaagatatagcggtagaattgataa
tgctaaatttaagttgaaaggtaaagaatatcagttagaaaaaaacaacggtgaacatca
tttacatggtggatgtcatggtttggacaataagttatttgattatgaaattagaaatga
aattgctcaaattaaagttatatttaagacggtgttgaaatcagctgatgatcatttccc
gggtgatatcgatgtgacgattacacatatttatgatgcggatcaccaatggtcgattga
atacgaa


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  Functional Coupling

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  Attributes

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  Protein Families

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