Protein Page for fig|451515.3.peg.2436

SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov

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Protein fig|451515.3.peg.2436: Staphylococcus aureus subsp. aureus USA300_FPR3757

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NCBI Taxonomy Id: 451515

Current Assignment: Ribose-5-phosphate isomerase A (EC 5.3.1.6)

Translate Function Assignments

Context on contig NC_007793 from base 2449606 to 2461124 (11519 bp)


Fid	Start	End	Size (nt)		Gap	SS	Ev	Function	Aliases
2431	2451267	2449606	1662	-		6: 2 6 9 1 4 3		Urocanate hydratase (EC 4.2.1.49)	gene_name\|hutU, locus\|SAUSA300_2278, protein_id\|YP_494913.1, gi\|87159917, geneID\|3914963
2432	2451427	2452311	885	+	159			Transcriptional regulator, LysR family	locus\|SAUSA300_2279, protein_id\|YP_494914.1, gi\|87160284, geneID\|3913491
2433	2452433	2452852	420	+	121	1: 7	dlit(16399398)	Fosfomycin resistance protein FosB	gene_name\|fosB, locus\|SAUSA300_2280, protein_id\|YP_494915.1, gi\|87161002, geneID\|3913568
2434	2454043	2453108	936	-	255	4: 2 1 4 3		Formiminoglutamase (EC 3.5.3.8)	gene_name\|hutG, locus\|SAUSA300_2281, protein_id\|YP_494916.1, gi\|87160628, geneID\|3915063
2435	2454333	2455592	1260	+	289		dlit(16923896)	Membrane protein SAV2335	locus\|SAUSA300_2282, protein_id\|YP_494917.1, gi\|87161379, geneID\|3914149
2436	2456344	2455658	687	-	65	3: 10 8 5		Ribose-5-phosphate isomerase A (EC 5.3.1.6)	gene_name\|rpiA, locus\|SAUSA300_2283, protein_id\|YP_494918.1, gi\|87159890, geneID\|3914936
2437	2456518	2457171	654	+	173			Uncharacterized protein conserved in bacteria	locus\|SAUSA300_2284, protein_id\|YP_494919.1, gi\|87160599, geneID\|3915218
2438	2457414	2457301	114	-	129			FIG01108134: hypothetical protein
2439	2458426	2457407	1020	-	-8			Aldose 1-epimerase (EC 5.1.3.3)	gene_name\|galM, locus\|SAUSA300_2285, protein_id\|YP_494920.1, gi\|87161694, geneID\|3914459
2440	2458782	2458456	327	-	29			Protein of unknown function UPF0060	locus\|SAUSA300_2286, protein_id\|YP_494921.1, gi\|87162407, geneID\|3915254
2441	2460232	2459000	1233	-	217			ABC-type Na+ efflux pump, permease component	locus\|SAUSA300_2287, protein_id\|YP_494922.1, gi\|87161971, geneID\|3914483
2442	2461124	2460225	900	-	-8			ABC transporter, ATP-binding protein	locus\|SAUSA300_2288, protein_id\|YP_494923.1, gi\|87161206, geneID\|3912781

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Subsystems in Which This Protein Plays a Role


Subsystem	Curator	Role
Dihydroxyacetone_kinases	SvetaG	*Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Glycolate,_glyoxylate_interconversions	SvetaG	*Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Glycolytic_pathways_HGM_New	Kutt_Laura_user	Ribose 5-phosphate isomerase A (EC 5.3.1.6)

Protein Sequence

>fig|451515.3.peg.2436 Ribose-5-phosphate isomerase A (EC 5.3.1.6)
MKDVKALKLMTLNDVLSQINGDMTLGIGTGSTMELLLPQMAQLIKERGYNITGVCTSNKI
AFLAKELGIKICEINDVDHIDLAIDGADEVDPSLNIIKGGGGALFREKVIDEMASRFVVV
VDETKIVQYLGETFKLPVEVDKFNWYHILRKIESYADIKVERRVNEDVAFITDNGNYILD
CKLPKGIDPYKFHEYLIHLTGVFETGYFLDMADQVIVGTQEGVKILEK

MD5 = e0beeb30baf7462bd0bae6a89d55c2a7

DNA Sequence

>fig|451515.3.peg.2436 Ribose-5-phosphate isomerase A (EC 5.3.1.6)
atgaaagatgtcaaagcactcaagttaatgacattaaatgatgttttaagtcaaatcaat
ggtgacatgacgctgggaattggtacaggaagtacaatggaattactcttacctcaaatg
gcgcaactaattaaagaacgtggttacaatattacaggtgtatgcacttctaataaaatt
gcatttttagcaaaagaattaggtattaaaatatgtgaaatcaatgatgttgatcatatc
gacttagcaattgatggtgctgatgaagtagatccatctttaaatataattaaaggtggc
ggtggtgcgctgttcagagagaaagttatagatgaaatggcatcgcgttttgttgtggtt
gtcgatgaaacgaaaatagttcaatacttaggtgagacgtttaagttaccagtagaggtg
gataaatttaactggtatcacatattacgtaaaattgaatcatacgctgatataaaagta
gaacgtcgtgtaaacgaagatgtcgcatttataactgataatggcaattatattttagat
tgtaagttaccaaaaggaattgacccatataagttccatgagtatttaattcatctgaca
ggtgtgtttgagacaggatacttcttagatatggcagatcaagttattgtaggcactcaa
gagggtgttaaaattttagaaaaataa

DNA with Flanking Sequence

>fig|451515.3.peg.2436 Ribose-5-phosphate isomerase A (EC 5.3.1.6)
cgcttcacctaaacgatattgattaccaaagtaaacatcagattcgtctaaataatcaaa
tgttaaattctctccaaacatcgcatgagtaggtagtgtaggtaaatcatcttgatacag
tgcataattatgcttactaaacccacaaactgctttatgtggtccaccatgatctttata
agcctgttcatcaccagtgaaaccagttgaagataaccatgttgtttgtgaaatcttagt
tttatctaaagcagagcgcatcggtcttttcgagctataaggcaaatcttggatttttcc
tgtcgaaattgcgtgaattgatatcatatcattctccttaacgagtattatttaaaatat
attgtactataaaacatttttagaattgtaaattctgattgatatgtttaaaaaaatgtt
agaaataagggtatgttaatttatacgagtcatgtaaaatatgaattgaatagattacat
aaatatgggaggctaccttcatgaaagatgtcaaagcactcaagttaatgacattaaatg
atgttttaagtcaaatcaatggtgacatgacgctgggaattggtacaggaagtacaatgg
aattactcttacctcaaatggcgcaactaattaaagaacgtggttacaatattacaggtg
tatgcacttctaataaaattgcatttttagcaaaagaattaggtattaaaatatgtgaaa
tcaatgatgttgatcatatcgacttagcaattgatggtgctgatgaagtagatccatctt
taaatataattaaaggtggcggtggtgcgctgttcagagagaaagttatagatgaaatgg
catcgcgttttgttgtggttgtcgatgaaacgaaaatagttcaatacttaggtgagacgt
ttaagttaccagtagaggtggataaatttaactggtatcacatattacgtaaaattgaat
catacgctgatataaaagtagaacgtcgtgtaaacgaagatgtcgcatttataactgata
atggcaattatattttagattgtaagttaccaaaaggaattgacccatataagttccatg
agtatttaattcatctgacaggtgtgtttgagacaggatacttcttagatatggcagatc
aagttattgtaggcactcaagagggtgttaaaattttagaaaaataatatatagtataga
aaagcgcttgctagcatcatctttttaagaggtactagcaagcgctttgttattatttgt
ttttatctgaagattgttcttcagttttttcgatatgtttttctgcatcaattacaactg
atgaacgtctgtcttctttataagtcgcaggttcttttaatgattgctctatttcatctt
catttgaatcgtttgttaaatcgtcactttgtggtgcttgtttaactgattctgctgatt
ctactgactccgaagtgatgtcatgatcttcatcatgattagattcagtttgattaccta
tgtgatgttgaggttctgttttttcagtaccttcatgaatgcttggttcgtcagccactg
tattttcagtatcatttttagcaacaccaaccgttgatgcagtagctacacctgtttttt
cagcatctttaatatttgaagaagatttttcagcctcagtatgattagtttcttcatcgt
cattgac

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