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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
The SEED


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Protein fig|440497.10.peg.894: Lactobacillus jensenii 1153

This feature in The SEED Viewer

NCBI Taxonomy Id: 440497

Current Assignment: hypothetical protein
Translate Function Assignments



Context on contig NZ_DS995846 from base 35 to 6384 (6350 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
893 35 703 669 +           Phage antirepressor protein  
894 1040 1210 171 + 336         hypothetical protein  
895 1393 1917 525 + 182         hypothetical protein  
896 1919 2248 330 + 1         hypothetical protein  
897 2381 2608 228 + 132         hypothetical protein  
898 2923 3672 750 + 314         Replication protein O  
899 3669 4100 432 + -4         FIG00742629: hypothetical protein  
900 4084 4890 807 + -17     1: 4   Helicase loader DnaI  
901 4869 5360 492 + -22     3: 1 3 2   Single-stranded DNA-binding protein  
902 5370 5975 606 + 9         FIG00746672: hypothetical protein  
903 6091 6384 294 + 115         Phage Holliday junction resolvase  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|440497.10.peg.894 hypothetical protein
MIKIADIEFEKDALNDGFKEFITELLKFLEGKTVLSSFYDDDKEQLEIQYLEKEEI

MD5 = 90928ee14cd0f38935cdf137a844a192


  DNA Sequence

>fig|440497.10.peg.894 hypothetical protein
atgattaagatagctgatattgaatttgaaaaagatgctcttaacgatggctttaaagaa
tttataaccgaacttttgaaattcttagaaggaaaaacggttctttcaagtttttacgac
gatgataaagaacaacttgaaattcaatatctagaaaaagaggagatctaa


  DNA with Flanking Sequence

>fig|440497.10.peg.894 hypothetical protein
acggttcagtatcaatcagcaagaccgctaaagttactggcaaaggccagcagtacttta
ttaataagttcttgaatgcagaagaacactcaggctacgtatttactggcgactctgaaa
cagaagtggtgctaactacaaataatgaacctatcttacattgatgaaaggaataacaat
gactaaaaaacacagcatttgtcaggttacttttaacggcaaaagtgggagatgttatga
aggctacataattagtcgaaagtttacagaaactgcgatgattttcgctcaaaatcataa
ttttgtactagaattcatccctttgtggaaagcaattctattcaagagaccgaaaggtaa
atgggtatatttaaaagatgtgtcacttgagtacctacgagaaacaccattcaaggtgga
aaaatacagctgtatagcagaaatggacacttatagaaaatacaaaacaaatgaagaagc
taatagagaggaaaaaataaatgattaagatagctgatattgaatttgaaaaagatgctc
ttaacgatggctttaaagaatttataaccgaacttttgaaattcttagaaggaaaaacgg
ttctttcaagtttttacgacgatgataaagaacaacttgaaattcaatatctagaaaaag
aggagatctaagaggtcgaaaacgatgactaaagaaaaatactataactacacatgcact
ggctgcggtatggaattgaagaaagatgatccagtctatatagataatgatggagattgg
ttctgtagtgaagtgtgcttagcaatctctaatactagtgaaagctttgatacgctcgag
gaggcaatagcaaatggctaaaattgcaatctcaaaaaacgacatctgccaacttattaa
tggctctgatttaggagttaaagcactgcttttgaaagatgacaatcaaattgtcatagc
acgtggttgctttggattagtatttgaccttaacaaagatttgacagaattatttccaga
ccatccagaacttgaagcggttgtgtttgaaggactgattaagcagtatcgaagcatgat
taatttaaagatgccagatgctgaatatttcaaaaagcataataagcaagaattcagcaa
agacgtattaatgatttcagattgcttctgc


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
fig|596325.3.peg.665 Lactobacillus jensenii 269-3 FIG   hypothetical protein
fig|596326.3.peg.2274 Lactobacillus jensenii 208-1 FIG   hypothetical protein
gb|EEQ24705.1 Lactobacillus jensenii 269-3     hypothetical protein LACJE0001_0534
gb|EEQ68457.1 Lactobacillus jensenii 1153     predicted protein
gi|238832397 Lactobacillus jensenii 269-3 NCBI   hypothetical protein LACJE0001_0534
gi|238855026 Lactobacillus jensenii 269-3 NCBI   hypothetical protein LACJE0001_0534
gi|239529456 Lactobacillus jensenii 1153 NCBI   predicted protein
gi|239632657 Lactobacillus jensenii 1153 NCBI   predicted protein
ref|ZP_04645355.1 Lactobacillus jensenii 269-3 RefSeq   hypothetical protein LACJE0001_0534
ref|ZP_04675688.1 Lactobacillus jensenii 1153 RefSeq   predicted protein
tr|C4VM30 Lactobacillus jensenii 269-3 TrEMBL   Putative uncharacterized protein
tr|C5G3X8 Lactobacillus jensenii 1153 TrEMBL   Predicted protein


  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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