Protein Page for fig|418127.6.peg.870

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

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Protein fig|418127.6.peg.870: Staphylococcus aureus subsp. aureus Mu3

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NCBI Taxonomy Id: 418127

Current Assignment: Phage antirepressor protein

Translate Function Assignments

Context on contig NC_009782 from base 917487 to 928354 (10868 bp)


Fid	Start	End	Size (nt)		Gap	Fc-sc	SS	Function	Aliases
862	917487	918884	1398	+			1: 2	Iron-sulfur cluster assembly protein SufB	locus\|SAHV_0842, protein_id\|YP_001441432.1, gi\|156979173, geneID\|5560331
863	920001	918952	1050	-	67	5		Phage integrase	gene_name\|int, locus\|SAHV_0843, protein_id\|YP_001441433.1, gi\|156979174, geneID\|5560311
864	920113	920292	180	+	111			Phage excisionase	gene_name\|int, locus\|SAHV_0844, protein_id\|YP_001441434.1, gi\|156979175, geneID\|5558948
865	921204	920272	933	-	-21			Hypothetical protein, SAV0849 homolog [SA bacteriophages 11, Mu50B]	locus\|SAHV_0845, protein_id\|YP_001441435.1, gi\|156979176, geneID\|5559064
866	921709	921236	474	-	31			Phage protein	locus\|SAHV_0846, protein_id\|YP_001441436.1, gi\|156979177, geneID\|5561439
867	922042	921713	330	-	3			Phage repressor protein cI	locus\|SAHV_0847, protein_id\|YP_001441437.1, gi\|156979178, geneID\|5561673
868	922483	922626	144	+	440			Phage protein
869	922825	922616	210	-	-11			Phage protein	locus\|SAHV_0849, protein_id\|YP_001441439.1, gi\|156979180, geneID\|5561601
870	922882	923661	780	+	56			Phage antirepressor protein	locus\|SAHV_0850, protein_id\|YP_001441440.1, gi\|156979181, geneID\|5560369
871	923662	923886	225	+	0			Phage phi 11 orf8 protein homolog	locus\|SAHV_0851, protein_id\|YP_001441441.1, gi\|156979182, geneID\|5560249
872	923926	924069	144	+	39			Phage protein	locus\|SAHV_0852, protein_id\|YP_001441442.1, gi\|156979183, geneID\|5561512
873	924738	924091	648	-	21			Phage protein	locus\|SAHV_0853, protein_id\|YP_001441443.1, gi\|156979184, geneID\|5561659
874	925023	925184	162	+	284			Phage phi 11 orf10a protein homolog
875	925277	925579	303	+	92			Phage protein	locus\|SAHV_0855, protein_id\|YP_001441445.1, gi\|156979186, geneID\|5559122
876	925584	925844	261	+	4			Phage phi 11 orf11 protein homolog
877	925854	926075	222	+	9			Phage phi-ETA orf16 protein homolog	locus\|SAHV_0857, protein_id\|YP_001441447.1, gi\|156979188, geneID\|5561372
878	926114	926692	579	+	38			Phage protein
879	926692	927117	426	+	-1		1: 1	Phage ssDNA binding protein	locus\|SAHV_0859, protein_id\|YP_001441449.1, gi\|156979190, geneID\|5559144
880	927128	927679	552	+	10			Phage HNH endonuclease	locus\|SAHV_0860, protein_id\|YP_001441450.1, gi\|156979191, geneID\|5561684
881	927680	928354	675	+	0			Phage phi 11 orf14 protein homolog	locus\|SAHV_0861, protein_id\|YP_001441451.1, gi\|156979192, geneID\|5559078

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Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|418127.6.peg.870 Phage antirepressor protein
MQALQTFNFEELPVRTLEVDGEPYFIGKDVADILGYANGRDALSKHVDEDDKKVLTSRNT
TLENLPNRGLTAVNESGLYSLIFSSKLESAKRFKRWVTSDVLPAIRKYGIYATDNVIEQT
LKDPDYIITVLTEYKKEKEQNLLLQQEIGELKPKADYVDEILKSTGTLATTQIAADYGIS
AQKLNKLLHEARLQRKVNKQWVLYSEHMGKSYTDSDTITIVRSDGREDTVLQTRWTQKGR
LKIHEIMTEFGYEANLGGA

MD5 = edb6840cea7ca7963f637b6a02f87e1a

DNA Sequence

>fig|418127.6.peg.870 Phage antirepressor protein
atgcaagcattacaaacatttaattttgaagaattaccagtaagaacattagaggttgac
ggagaaccatattttataggaaaagatgttgctgacattttaggatatgcaaacggacga
gatgctttgtcaaaacatgttgatgaagacgacaagaaagttctaacgtcgcgaaatacg
actttagaaaatttaccaaatcgaggacttactgcagtcaacgaatcgggtttatacagc
ctaatcttctcatcaaaactagaatcagctaaacgattcaaacgctgggtaacatcagat
gtcctaccagccattcgcaaatatggtatctacgcaacggacaacgtaattgaacaaaca
ttaaaagatccagactacatcattacagtgttgactgagtataagaaagaaaaagagcaa
aacttacttttgcaacaagaaatcggagagctaaaacccaaagcagattatgttgatgaa
atcttaaaatcaactggcacattagctacaactcaaatcgcggcagactacggtatatca
gcacaaaagttaaacaaactactacacgaagctagactacaacgaaaagtaaataaacag
tgggtgctttactcagaacacatgggcaagagttacacagattcagacactataacaatt
gtgcgttctgatggcagagaagacacagttttacaaactagatggacacaaaaaggcaga
ttgaaaatacatgaaatcatgactgaattcggttatgaagctaatttagggggagcgtaa

DNA with Flanking Sequence

>fig|418127.6.peg.870 Phage antirepressor protein
gataaaggtctaaatttttttgaccttcgtataactttttataacttttaggtaatgtaa
caaatggacataaacaaagatcttaaaaggaggaataacaaatgttacaaaaatttagaa
tcgctaaagaaaaaagtaaattaaaactcaatttactaaaacatgcaaacagtaatttag
aaacaagaaacaaccctgaactgttgcgagcagttgcagagttgcttaaagagattaatc
gataaattctatgaattcgattttagctgaagcgatagctactattttgtctccaacaaa
agtatatgagccattagtgaacaaggaacttttaattttttcttttgatatttcaacagt
tccgcgatgacctgactttatcactttttctaaattatcgatttcaacaaatttatcatt
agaaagatataaacaagctttcatacttatcacctccttaggttgataacaacattatac
acgaaaggagcataaacattatgcaagcattacaaacatttaattttgaagaattaccag
taagaacattagaggttgacggagaaccatattttataggaaaagatgttgctgacattt
taggatatgcaaacggacgagatgctttgtcaaaacatgttgatgaagacgacaagaaag
ttctaacgtcgcgaaatacgactttagaaaatttaccaaatcgaggacttactgcagtca
acgaatcgggtttatacagcctaatcttctcatcaaaactagaatcagctaaacgattca
aacgctgggtaacatcagatgtcctaccagccattcgcaaatatggtatctacgcaacgg
acaacgtaattgaacaaacattaaaagatccagactacatcattacagtgttgactgagt
ataagaaagaaaaagagcaaaacttacttttgcaacaagaaatcggagagctaaaaccca
aagcagattatgttgatgaaatcttaaaatcaactggcacattagctacaactcaaatcg
cggcagactacggtatatcagcacaaaagttaaacaaactactacacgaagctagactac
aacgaaaagtaaataaacagtgggtgctttactcagaacacatgggcaagagttacacag
attcagacactataacaattgtgcgttctgatggcagagaagacacagttttacaaacta
gatggacacaaaaaggcagattgaaaatacatgaaatcatgactgaattcggttatgaag
ctaatttagggggagcgtaaatgacaccagaacaaaaagaaaagctaaacaatatagtat
taacactttatgcagttaaagaaaacaaaagtcaaacatacacacacaaagatactctta
ctgtgacatatgcaggcgagattgagcacacttacgaagtcgacagagagaaacaccttg
aatcaatgattgagtgggcaattgaccaaatcgaacagcactttgatttagacgaagaag
aataacacacaattgaacaaacaacttaataggaggaactacaaatgttacaaaaattta
gaatcgctaaagaaaaaagtaaattaaaactcaatttactaaaacatgcaaacagtaatt
tagaaacaagaaacaaccctgaactgttgcgagcagttgcagagttgcttaaagagatta
atcgataaattagagaactaatcatcgtttcagttctcgtcatctaagtaattagcaatt
acgtaaagtgttaaaagagttgctattacattaaaaaaca

Assignments for Essentially Identical Proteins


Id	Organism	Who	Assignment
GO:0003677			F:DNA binding
cmr\|NT02SA0851	Staphylococcus aureus Mu50		anti-repressor
dbj\|BAB57017.1	Staphylococcus aureus subsp. aureus Mu50		similar to anti-repressor
dbj\|BAF77733.1	Staphylococcus aureus subsp. aureus Mu3		hypothetical protein
fig\|158878.1.peg.855	Staphylococcus aureus subsp. aureus Mu50	FIG	Phage antirepressor protein
fig\|158878.14.peg.880	Staphylococcus aureus subsp. aureus Mu50	FIG	Phage antirepressor protein
fig\|418127.4.peg.794	Staphylococcus aureus subsp. aureus Mu3	FIG	Phage antirepressor protein
fig\|585891.3.peg.879	Staphylococcus aureus subsp. aureus Mu50-omega	FIG	Phage antirepressor protein
gi\|14246624	Staphylococcus aureus subsp. aureus Mu50	NCBI	similar to anti-repressor
gi\|156721316	Staphylococcus aureus subsp. aureus Mu3	NCBI	hypothetical protein
gi\|156979181	Staphylococcus aureus subsp. aureus Mu3	NCBI	hypothetical protein SAHV_0850
gi\|15923845	Staphylococcus aureus subsp. aureus Mu50	NCBI	anti-repressor
gi\|255005643	Staphylococcus aureus subsp. aureus Mu50-omega	NCBI	hypothetical protein SauraM_04210
img\|637099368	Staphylococcus aureus aureus Mu50	IMG	similar to anti-repressor
img\|640903591	Staphylococcus aureus aureus Mu3	IMG	hypothetical protein
kegg\|sav:SAV0855		KEGG	anti-repressor
kegg\|saw:SAHV_0850	Staphylococcus aureus subsp. aureus Mu3	KEGG	hypothetical protein
ref\|NP_371379.1	Staphylococcus aureus subsp. aureus Mu50	RefSeq	anti-repressor
ref\|YP_001441440.1	Staphylococcus aureus subsp. aureus Mu3	RefSeq	hypothetical protein SAHV_0850
ref\|ZP_05144244.2	Staphylococcus aureus subsp. aureus Mu50-omega	RefSeq	hypothetical protein SauraM_04210
tr\|A7X043	Staphylococcus aureus (strain Mu3 / ATCC 700698)	TrEMBL	Putative uncharacterized protein
tr\|Q932B6	Staphylococcus aureus (strain Mu50 / ATCC 700699)	TrEMBL	Similar to anti-repressor

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Functional Coupling


Score	Peg	Function
5	fig\|418127.6.peg.863	Phage integrase

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