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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|411471.5.peg.2535: Subdoligranulum variabile DSM 15176

This feature in The SEED Viewer

NCBI Taxonomy Id: 411471

Current Assignment: Phage antirepressor protein
Translate Function Assignments


Context on contig NZ_GG657715 from base 764260 to 776741 (12482 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2528 764862 764260 603 -       12: 11 3 4 9 7 10 15 14 6 5 12 13   Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter  
rna.48 765278 765362 85 + 415     1: 8   tRNA-Leu-CAA  
2529 765552 765400 153 - 37         hypothetical protein  
2530 766386 767012 627 + 833     2: 1 2   Chromosome (plasmid) partitioning protein ParA  
2531 766969 767904 936 + -44     2: 1 2   Chromosome (plasmid) partitioning protein ParB  
2532 767919 768197 279 + 14         hypothetical protein  
2533 768288 768413 126 + 90         hypothetical protein  
2534 768478 769356 879 + 64         hypothetical protein  
2535 769396 770139 744 + 39         Phage antirepressor protein  
2536 770226 770726 501 + 86         FIG00515953: hypothetical protein  
2537 770723 772552 1830 + -4         TrsK-like protein  
2538 772767 772985 219 + 214         FIG00529559: hypothetical protein  
2539 773056 773925 870 + 70         Tn5252, Orf23  
2540 773948 774364 417 + 22         FIG00516512: hypothetical protein  
2541 774468 776741 2274 + 103         TrsE-like protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|411471.5.peg.2535 Phage antirepressor protein
MNQMEIFKNPEFGAIRAVEIDGEPWLVGKDVALALGYKNPQEAIRNHVDAEDKGVSEILT
PGGIQKLPIINESGLYSLVLSSKLPKAKQFRRWVTSEVLPSIRQHGAYLTREKLWEVATS
PEALLKLCSDLLAEREKNAALQADNARLQGKAVYYDLFIDLRHSTNLRTTAKELEVPERR
FVRFLLERRYVYRAPSGCVLPYAKSANEGLFCVKDFCRNGHTGSYTLVTPKGKLHFAELR
SLILVTV

MD5 = 2094588e7b5137af56b922fd445a9e95


  DNA Sequence

>fig|411471.5.peg.2535 Phage antirepressor protein
atgaaccagatggaaattttcaaaaacccggagtttggggctatccgcgccgtagagatt
gacggagagccttggctggtcggaaaagatgtggcgttagcgttagggtataaaaatccg
caggaggcgatccgcaaccacgttgacgcagaggacaaaggggtgagcgaaattctcacc
cctggcgggattcagaaactccctatcatcaacgagtccggcctgtattctctggtgttg
tccagcaaacttcccaaagcaaagcagttccgccgctgggtcacgtctgaggtcctgccc
agcatccgccagcacggggcctacctcaccagggaaaaactgtgggaggtcgccacctcg
ccggaggcgctgctgaagctctgctccgacctgctggccgagcgcgagaagaacgcggcg
ctgcaagcggacaacgcccggctgcaaggcaaggccgtctactacgacctgtttatcgac
ctgcggcacagcaccaacctgcgcaccaccgccaaggagttggaggtgccggagcggcgc
ttcgtccgtttcctgctggaacgccggtacgtttaccgcgccccctccggctgtgtgctg
ccctacgccaagagcgccaacgaggggctgttctgtgtgaaggatttttgccgcaacggc
cacactggctcctacacgctggtgacgcccaagggcaagctgcactttgcagaactgcgg
tcgctgatcctggtgacggtatga


  DNA with Flanking Sequence

>fig|411471.5.peg.2535 Phage antirepressor protein
aaacaacggatgtaccaagtaccgattccattcccttccggggatttgcggcggccaggc
cgccggaacggaaaggacgggatgcgatgtcggtggaagaaatggagagttatcgggatt
tggtgttggagaacatcgagtacgaccacctgtgccgggagttttcgacctaccgggagg
atctggacgagatcgtggagctgatcgtggaaacggtctgcgccagacgcaagaccaccc
gcattgccggggcggactttccccatgaggtcgtgcggtcgcggttcttgaagctggaca
gctcccacatcgagttcgtcatggagtgtctgcacaacaacaccaccgaggtccgcaaca
tgaagcagtacctgctgaccgtgctgttcaacgcgcccaccaccatgaacaatcactaca
cggcccaggtcaaccacgatatgcacgcaggcggctggtaatggccgccttttctgctgc
accgcccaaggaggcacgatatgaaccagatggaaattttcaaaaacccggagtttgggg
ctatccgcgccgtagagattgacggagagccttggctggtcggaaaagatgtggcgttag
cgttagggtataaaaatccgcaggaggcgatccgcaaccacgttgacgcagaggacaaag
gggtgagcgaaattctcacccctggcgggattcagaaactccctatcatcaacgagtccg
gcctgtattctctggtgttgtccagcaaacttcccaaagcaaagcagttccgccgctggg
tcacgtctgaggtcctgcccagcatccgccagcacggggcctacctcaccagggaaaaac
tgtgggaggtcgccacctcgccggaggcgctgctgaagctctgctccgacctgctggccg
agcgcgagaagaacgcggcgctgcaagcggacaacgcccggctgcaaggcaaggccgtct
actacgacctgtttatcgacctgcggcacagcaccaacctgcgcaccaccgccaaggagt
tggaggtgccggagcggcgcttcgtccgtttcctgctggaacgccggtacgtttaccgcg
ccccctccggctgtgtgctgccctacgccaagagcgccaacgaggggctgttctgtgtga
aggatttttgccgcaacggccacactggctcctacacgctggtgacgcccaagggcaagc
tgcactttgcagaactgcggtcgctgatcctggtgacggtatgacaggccggtatctgct
gcggcggctggtggtcccgccttagattcaagaccacccactgcataaccgacgaaggga
ggcgagaaaaatgcaggaggaagtggaaaacaggactttgacgctgatcgtcagcgggac
aaagttcaccgggcggctgttcaaggccgccatatccaagtacatggcccaccgcaggga
gaaaaagctggaaaagcagcgcagccgggattcccccgttacccccaagggcaagcagac
ggtgaagcagctcatcgggcagaaccagggcgtctccaacatcgagatcaacgacccgtc
catccgtgattttgagcgcatcgcccgcaagtacggcgtggactatgcggtaaaaaagga
ccgcagcgccttgccgcccaagtacctgatcttcttcaaagcccgtgacgccgacgccct
gacggcggcattctcggagtacacccagaagaaggtcaagaaggccgaccgcagcgagcg
cccg


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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