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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|411471.5.peg.2534: Subdoligranulum variabile DSM 15176

This feature in The SEED Viewer

NCBI Taxonomy Id: 411471

Current Assignment: hypothetical protein
Translate Function Assignments


Context on contig NZ_GG657715 from base 762677 to 774364 (11688 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2526 763588 762677 912 -           hypothetical protein  
2527 764243 763581 663 - -8         probable phosphoglycolate phosphatase  
2528 764862 764260 603 - 16     11: 11 3 4 9 7 10 14 13 6 5 12   Substrate-specific component QueT (COG4708) of predicted queuosine-regulated ECF transporter  
rna.48 765278 765362 85 + 415     1: 8   tRNA-Leu-CAA  
2529 765552 765400 153 - 37         hypothetical protein  
2530 766386 767012 627 + 833     2: 1 2   Chromosome (plasmid) partitioning protein ParA  
2531 766969 767904 936 + -44     2: 1 2   Chromosome (plasmid) partitioning protein ParB  
2532 767919 768197 279 + 14         hypothetical protein  
2533 768288 768413 126 + 90         hypothetical protein  
2534 768478 769356 879 + 64         hypothetical protein  
2535 769396 770139 744 + 39         Phage antirepressor protein  
2536 770226 770726 501 + 86         FIG00515953: hypothetical protein  
2537 770723 772552 1830 + -4         TrsK-like protein  
2538 772767 772985 219 + 214         FIG00529559: hypothetical protein  
2539 773056 773925 870 + 70         Tn5252, Orf23  
2540 773948 774364 417 + 22         FIG00516512: hypothetical protein  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|411471.5.peg.2534 hypothetical protein
MAVFRIERTRDYTVMSNHHLRDKALSLKSKGLLSMMLSLPEDWNYTTRGLAKICKEGVDA
IGGALRELEAAGYIVRHQMRDRQGRISDTEYVIYEKPQPKEPDTPQPDTASPDTENPYLA
DPDTEKPAELNIEKSKAQKQTTDVPSTDSIPFRGFAAARPPERKGRDAMSVEEMESYRDL
VLENIEYDHLCREFSTYREDLDEIVELIVETVCARRKTTRIAGADFPHEVVRSRFLKLDS
SHIEFVMECLHNNTTEVRNMKQYLLTVLFNAPTTMNNHYTAQVNHDMHAGGW

MD5 = c45e1d1530d68161965288ffb3d12e30


  DNA Sequence

>fig|411471.5.peg.2534 hypothetical protein
atggccgtttttcgtattgaacggacccgtgattataccgtgatgagcaaccaccacctg
cgtgataaggcgctgtctctgaaatccaaggggcttttgtccatgatgttatctctgcca
gaggactggaactacaccacacgcggtctggcgaagatctgcaaggagggcgtggacgcc
atcggcggggcgctgcgggagctggaagccgccgggtacatcgtccgccaccagatgcgg
gaccgccaaggacgcatcagcgacaccgagtatgtcatctatgagaagccccagcccaaa
gagccggatacgccccagccggatacggcttcaccagatacggaaaacccgtatctggct
gacccggatacggaaaagcccgcagaattaaatatagagaaatcaaaggcccaaaaacaa
acaacggatgtaccaagtaccgattccattcccttccggggatttgcggcggccaggccg
ccggaacggaaaggacgggatgcgatgtcggtggaagaaatggagagttatcgggatttg
gtgttggagaacatcgagtacgaccacctgtgccgggagttttcgacctaccgggaggat
ctggacgagatcgtggagctgatcgtggaaacggtctgcgccagacgcaagaccacccgc
attgccggggcggactttccccatgaggtcgtgcggtcgcggttcttgaagctggacagc
tcccacatcgagttcgtcatggagtgtctgcacaacaacaccaccgaggtccgcaacatg
aagcagtacctgctgaccgtgctgttcaacgcgcccaccaccatgaacaatcactacacg
gcccaggtcaaccacgatatgcacgcaggcggctggtaa


  DNA with Flanking Sequence

>fig|411471.5.peg.2534 hypothetical protein
tcaggacagcacccgctggatggtggagtttgcggtccgcaagccccgcaccccttacgg
cagccccggcgacgaggtgcgcctgtttctcaccgaggacggctaccggcaggccctgga
cgcccagcgcagccagcagatcaaaattaagcgccatgcccacgttgtcgaggggcacat
catcgacttcaagccgaagaaaaagcgccgccacccgtaaaccaaccacttgccaagaaa
ggaatgaactatgtgtaccgttagagacattgaagaagccatccgcgaacactgccaatc
ccagcatgacatggaaagcaccgagatcgaccaggtgatgcagcgcctgcccttcggcac
cgcgcaggatgtttttacccggccccctgtgccgaagccgccgtattcctggcacagccg
gaactaccgcacctgaccgccgcagtctctttgaagattgcggcttttttcatgccatga
atgccgagaggagtgatgaaatggccgtttttcgtattgaacggacccgtgattataccg
tgatgagcaaccaccacctgcgtgataaggcgctgtctctgaaatccaaggggcttttgt
ccatgatgttatctctgccagaggactggaactacaccacacgcggtctggcgaagatct
gcaaggagggcgtggacgccatcggcggggcgctgcgggagctggaagccgccgggtaca
tcgtccgccaccagatgcgggaccgccaaggacgcatcagcgacaccgagtatgtcatct
atgagaagccccagcccaaagagccggatacgccccagccggatacggcttcaccagata
cggaaaacccgtatctggctgacccggatacggaaaagcccgcagaattaaatatagaga
aatcaaaggcccaaaaacaaacaacggatgtaccaagtaccgattccattcccttccggg
gatttgcggcggccaggccgccggaacggaaaggacgggatgcgatgtcggtggaagaaa
tggagagttatcgggatttggtgttggagaacatcgagtacgaccacctgtgccgggagt
tttcgacctaccgggaggatctggacgagatcgtggagctgatcgtggaaacggtctgcg
ccagacgcaagaccacccgcattgccggggcggactttccccatgaggtcgtgcggtcgc
ggttcttgaagctggacagctcccacatcgagttcgtcatggagtgtctgcacaacaaca
ccaccgaggtccgcaacatgaagcagtacctgctgaccgtgctgttcaacgcgcccacca
ccatgaacaatcactacacggcccaggtcaaccacgatatgcacgcaggcggctggtaat
ggccgccttttctgctgcaccgcccaaggaggcacgatatgaaccagatggaaattttca
aaaacccggagtttggggctatccgcgccgtagagattgacggagagccttggctggtcg
gaaaagatgtggcgttagcgttagggtataaaaatccgcaggaggcgatccgcaaccacg
ttgacgcagaggacaaaggggtgagcgaaattctcacccctggcgggattcagaaactcc
ctatcatcaacgagtccggcctgtattctctggtgttgtccagcaaacttcccaaagcaa
agcagttccgccgctgggtcacgtctgaggtcctgcccagcatccgccagcacggggcct
acctcaccagggaaaaactgtgggaggtcgccacctcgccggaggcgctgctgaagctct
gctccgacctgctggccgagcgcgagaagaacgcggcgctgcaagcggacaacgcccggc
tgcaaggcaaggccgtcta


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
fig|411471.5.peg.3270 Subdoligranulum variabile DSM 15176 FIG   hypothetical protein


  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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