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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|393117.11.peg.1630: Listeria monocytogenes FSL J1-194

This feature in The SEED Viewer

NCBI Taxonomy Id: 393117

Current Assignment: FIG00776009: hypothetical protein
Translate Function Assignments



Context on contig NZ_AARJ02000004 from base 44094 to 54803 (10710 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1616 44585 44094 492 -           Phage protein locus|LmonFS_020200008028, protein_id|ZP_05230098.1, gi|254825097, CDD:114812
1617 44923 44618 306 - 32         Repressor (CI-like) [Bacteriophage A118] locus|LmonFS_020200008033, protein_id|ZP_05230099.1, gi|254825098, CDD:128803
1618 45049 45291 243 + 125         Repressor (cro-like) [Bacteriophage A118] locus|LmonFS_020200008038, protein_id|ZP_05230100.1, gi|254825099, CDD:128803
1619 45295 45561 267 + 3         Protein gp37 [Bacteriophage A118] locus|LmonFS_020200008043, protein_id|ZP_05230101.1, gi|254825100
1620 45720 45490 231 - -72         Phage protein locus|LmonFS_020200008048, protein_id|ZP_05230102.1, gi|254825101
1621 45786 45980 195 + 65         FIG00774265: hypothetical protein locus|LmonFS_020200008053, protein_id|ZP_05230103.1, gi|254825102
1622 45992 46276 285 + 11         FIG00774252: hypothetical protein locus|LmonFS_020200008058, protein_id|ZP_05230104.1, gi|254825103
1623 46302 46583 282 + 25         Protein gp41 [Bacteriophage A118] locus|LmonFS_020200008063, protein_id|ZP_05230105.1, gi|254825104
1624 46615 46776 162 + 31         FIG00775553: hypothetical protein locus|LmonFS_020200008068, protein_id|ZP_05230106.1, gi|254825105
1625 47011 46769 243 - -8         Hypothetical protein, Lin0079 homolog [Bacteriophage A118] locus|LmonFS_020200008073, protein_id|ZP_05230107.1, gi|254825106
1626 47075 47854 780 + 63         Phage antirepressor protein / Antirepressor [Bacteriophage A118] locus|LmonFS_020200008078, protein_id|ZP_05230108.1, gi|254825107, CDD:112200
1627 47975 48508 534 + 120         Protein gp43 [Bacteriophage A118] locus|LmonFS_020200008083, protein_id|ZP_05230109.1, gi|254825108
1628 48505 48720 216 + -4         Protein gp44 [Bacteriophage A118] locus|LmonFS_020200008088, protein_id|ZP_05230110.1, gi|254825109
1629 48829 49017 189 + 108         Protein gp45 [Bacteriophage A118] locus|LmonFS_020200008093, protein_id|ZP_05230111.1, gi|254825110, CDD:119173
1630 49250 49438 189 + 232         FIG00776009: hypothetical protein locus|LmonFS_020200008098, protein_id|ZP_05230112.1, gi|254825111
1631 49435 50316 882 + -4         FIG00775957: hypothetical protein locus|LmonFS_020200008103, protein_id|ZP_05230113.1, gi|254825112
1632 50387 51079 693 + 70         Prophage Lp1 protein 19 locus|LmonFS_020200008108, protein_id|ZP_05230114.1, gi|254825113
1633 51100 52020 921 + 20         DnaD domain protein locus|LmonFS_020200008113, protein_id|ZP_05230115.1, gi|254825114, CDD:113268
1634 52017 52598 582 + -4         hypothetical protein locus|LmonFS_020200008118, protein_id|ZP_05230116.1, gi|254825115
1635 52608 52898 291 + 9         FIG00775107: hypothetical protein locus|LmonFS_020200008123, protein_id|ZP_05230117.1, gi|254825116
1636 52898 53878 981 + -1         Modification methylase ScrFIB (EC 2.1.1.37) locus|LmonFS_020200008128, protein_id|ZP_05230118.1, gi|254825117, CDD:73191
1637 53875 54408 534 + -4         Protein gp51 [Bacteriophage A118] locus|LmonFS_020200008133, protein_id|ZP_05230119.1, gi|254825118, CDD:116464
1638 54405 54803 399 + -4         Hypothetical protein, Lmo2313 homolog [Bacteriophage A118] locus|LmonFS_020200008138, protein_id|ZP_05230120.1, gi|254825119, CDD:130732

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|393117.11.peg.1630 FIG00776009: hypothetical protein
MWFLTTYSNIKVKVFDFSESEAATELFNYLRFYQSNKEGSKEFDDLIKIYQLLVGEEGVV
NV

MD5 = 92bfaac4bd352e8587d19703ea73a39f


  DNA Sequence

>fig|393117.11.peg.1630 FIG00776009: hypothetical protein
atgtggtttttaacaacctattcaaatatcaaagtaaaagtgtttgattttagcgaaagt
gaagcggcaaccgaattatttaattatcttcgcttctatcaaagtaataaagaaggaagt
aaagaattcgacgatttaattaagatataccagttgttagttggagaagaaggagtggtt
aacgtatga


  DNA with Flanking Sequence

>fig|393117.11.peg.1630 FIG00776009: hypothetical protein
ataacagcagcggcgttagctttaataaacttatgtaatttgattttaattctgatttta
atttaggagggctacaacaatgacagaaagagttttcagaaagacaacaaacttcggaga
tagcgaaattcatacaaatagtaaaacaaaaatgatagctaatccggcgtttcagcagaa
aatcccattaaacgaaacaggttgcgacaacatgactgactatatagaagagttgaagtt
aaaaggttatgaggaggtcacgcgctgatggatgtatttatggtaatgattttcgtgtcg
tttatgtctgtgattgcaggtttttggctgagaggaagtgataaacgtggttgagaatcc
gatggttgttgatgatctttgggacgatggttttagacattaaaaaagcacgcatagcag
tgcgcgctttaaggatttgagatattaccttaacaaaattatacctcaggtccattaaaa
aatcaatggaggtaacatatatgtggtttttaacaacctattcaaatatcaaagtaaaag
tgtttgattttagcgaaagtgaagcggcaaccgaattatttaattatcttcgcttctatc
aaagtaataaagaaggaagtaaagaattcgacgatttaattaagatataccagttgttag
ttggagaagaaggagtggttaacgtatgaatgaattaggaatggaattatctaaacagca
ggggaacggagttatggctcatgcgacggcgagtcgtgaaatggaggaagtaaaagggca
aatttttatggcgcaaaatttcccccgaaatcaatatcaagcagaaatccgaattttaga
agcatgtaaacgacttagattagcggaaactgcaatctatcaatatccgcgaggtggtca
aaaagtaattggtccatcaattcgcttagcagaagtgttagcgcagaattggggaaatat
tagctttggtgttaaggaattagaaagaaacgaccacgagtctacagcaatggcttacgc
atgggatgctgaaacaaatactagaacagaaaaaatattcaccgtgccacacaaacgaac
aactaaaaaaggaacgcagatggttactgacgaacgagatatatatgagcttgtagctaa
tatggggtcgcgccgattgagagcttgcttattgagcgttattcccgga


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
fig|393121.7.peg.3158 Listeria monocytogenes FSL J2-071 FIG   FIG00776009: hypothetical protein
fig|393130.3.peg.1547 Listeria monocytogenes J0161 FIG   FIG00776009: hypothetical protein
fig|393130.8.peg.2927 Listeria monocytogenes J0161 FIG   FIG00776009: hypothetical protein
fig|393131.7.peg.2885 Listeria monocytogenes J2818 FIG   FIG00776009: hypothetical protein
gi|254825111 Listeria monocytogenes FSL J1-194 NCBI   hypothetical protein LmonFS_08098
gi|254880690 Listeria monocytogenes FSL J2-071 NCBI   hypothetical protein LmonFSL_15923
gi|254901059 Listeria monocytogenes J0161 NCBI   hypothetical protein LmonJ_14633
gi|254913991 Listeria monocytogenes J2818 NCBI   hypothetical protein LmonJ2_14383
img|641752701 Listeria monocytogenes FSL J1-194 IMG   hypothetical protein
ref|ZP_05230112.1 Listeria monocytogenes FSL J1-194 RefSeq   hypothetical protein LmonFS_08098
ref|ZP_05253400.1 Listeria monocytogenes FSL J2-071 RefSeq   hypothetical protein LmonFSL_15923
ref|ZP_05260983.1 Listeria monocytogenes J0161 RefSeq   hypothetical protein LmonJ_14633
ref|ZP_05264003.1 Listeria monocytogenes J2818 RefSeq   hypothetical protein LmonJ2_14383


  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

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  Protein Families

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