Protein Page for fig|393117.11.peg.1620

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

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Protein fig|393117.11.peg.1620: Listeria monocytogenes FSL J1-194

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NCBI Taxonomy Id: 393117

Current Assignment: Phage protein

Translate Function Assignments

Context on contig NZ_AARJ02000004 from base 40464 to 51079 (10616 bp)


Fid	Start	End	Size (nt)		Gap	Function	Aliases
1611	40940	40464	477	-		Competence transcription factor	locus\|LmonFS_020200008003, protein_id\|ZP_05230093.1, gi\|254825092, CDD:34512
1612	42289	40931	1359	-	-10	Integrase [Bacteriophage A118]	locus\|LmonFS_020200008008, protein_id\|ZP_05230094.1, gi\|254825093, CDD:129090
1613	43093	42353	741	-	63	putative superinfection immunity protein	locus\|LmonFS_020200008013, protein_id\|ZP_05230095.1, gi\|254825094
1614	43837	43115	723	-	21	Phage A118 gp33 protein homolog	locus\|LmonFS_020200008018, protein_id\|ZP_05230096.1, gi\|254825095, CDD:118382
1615	44071	43853	219	-	15	Protein gp34 [Bacteriophage A118]	locus\|LmonFS_020200008023, protein_id\|ZP_05230097.1, gi\|254825096
1616	44585	44094	492	-	22	Phage protein	locus\|LmonFS_020200008028, protein_id\|ZP_05230098.1, gi\|254825097, CDD:114812
1617	44923	44618	306	-	32	Repressor (CI-like) [Bacteriophage A118]	locus\|LmonFS_020200008033, protein_id\|ZP_05230099.1, gi\|254825098, CDD:128803
1618	45049	45291	243	+	125	Repressor (cro-like) [Bacteriophage A118]	locus\|LmonFS_020200008038, protein_id\|ZP_05230100.1, gi\|254825099, CDD:128803
1619	45295	45561	267	+	3	Protein gp37 [Bacteriophage A118]	locus\|LmonFS_020200008043, protein_id\|ZP_05230101.1, gi\|254825100
1620	45720	45490	231	-	-72	Phage protein	locus\|LmonFS_020200008048, protein_id\|ZP_05230102.1, gi\|254825101
1621	45786	45980	195	+	65	FIG00774265: hypothetical protein	locus\|LmonFS_020200008053, protein_id\|ZP_05230103.1, gi\|254825102
1622	45992	46276	285	+	11	FIG00774252: hypothetical protein	locus\|LmonFS_020200008058, protein_id\|ZP_05230104.1, gi\|254825103
1623	46302	46583	282	+	25	Protein gp41 [Bacteriophage A118]	locus\|LmonFS_020200008063, protein_id\|ZP_05230105.1, gi\|254825104
1624	46615	46776	162	+	31	FIG00775553: hypothetical protein	locus\|LmonFS_020200008068, protein_id\|ZP_05230106.1, gi\|254825105
1625	47011	46769	243	-	-8	Hypothetical protein, Lin0079 homolog [Bacteriophage A118]	locus\|LmonFS_020200008073, protein_id\|ZP_05230107.1, gi\|254825106
1626	47075	47854	780	+	63	Phage antirepressor protein / Antirepressor [Bacteriophage A118]	locus\|LmonFS_020200008078, protein_id\|ZP_05230108.1, gi\|254825107, CDD:112200
1627	47975	48508	534	+	120	Protein gp43 [Bacteriophage A118]	locus\|LmonFS_020200008083, protein_id\|ZP_05230109.1, gi\|254825108
1628	48505	48720	216	+	-4	Protein gp44 [Bacteriophage A118]	locus\|LmonFS_020200008088, protein_id\|ZP_05230110.1, gi\|254825109
1629	48829	49017	189	+	108	Protein gp45 [Bacteriophage A118]	locus\|LmonFS_020200008093, protein_id\|ZP_05230111.1, gi\|254825110, CDD:119173
1630	49250	49438	189	+	232	FIG00776009: hypothetical protein	locus\|LmonFS_020200008098, protein_id\|ZP_05230112.1, gi\|254825111
1631	49435	50316	882	+	-4	FIG00775957: hypothetical protein	locus\|LmonFS_020200008103, protein_id\|ZP_05230113.1, gi\|254825112
1632	50387	51079	693	+	70	Prophage Lp1 protein 19	locus\|LmonFS_020200008108, protein_id\|ZP_05230114.1, gi\|254825113

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Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|393117.11.peg.1620 Phage protein
MIKVSLIEEGKVLQNMELYYLPRKGDVISSTNIKAPHYLVNVVAHVDGHELVNLHVQEFA
NQVVAGNEINGFRNNR

MD5 = ecd1942076071f965783dd8ffcef6941

DNA Sequence

>fig|393117.11.peg.1620 Phage protein
atgattaaagtttcgctaattgaagaagggaaagttcttcaaaatatggaactctattat
ttacctagaaaaggtgacgtcatttcaagtaccaatataaaagcaccgcattacctagtt
aatgtagtagcacatgtagatggtcacgaactggtaaatttacatgtccaggaattcgcg
aatcaagttgtcgcaggcaatgagattaacggtttccgaaataatcgatga

DNA with Flanking Sequence

>fig|393117.11.peg.1620 Phage protein
gatattccacttgtacaactggtaatgatcctgcttttaaatctaacttgaccgctgtaa
ttccttttcttaattgttttccattgatttctaatactccataacagcagtttctatctc
cttgcattttaatatttaacgatttcaagatttctggaggtatgattttggttttaaaaa
ctgattctttctcttcacttcttttattactcaaatatcttatgttcattttctagcctc
ctattttcttttgcccaaatcgccgttagttttttccgataatctattaactaatgaatt
aatttctgaataaagttccggcaaaatacttaaatcgctaaaatcttcgccagttatact
taattcaatggtgagtactgactcttttctatttctcttagttaggaaagagtttgtaaa
tgcaatttttttcattttctagcctcctatttttggttactctccaatctgctataatta
gtttgattggaggtgatattatgattaaagtttcgctaattgaagaagggaaagttcttc
aaaatatggaactctattatttacctagaaaaggtgacgtcatttcaagtaccaatataa
aagcaccgcattacctagttaatgtagtagcacatgtagatggtcacgaactggtaaatt
tacatgtccaggaattcgcgaatcaagttgtcgcaggcaatgagattaacggtttccgaa
ataatcgatgaatctattgttttaatccaatatgcatttttaattgtttcgctatctaag
tacactgcttgtttggtaagcacaataactttttgtccaccttgataagttacataaccc
ttcctaacaagcagtgtgccttcagttgtttcctcaattcttccaactactcgtcccgca
atttctaaaatgtctcctactttcattttctagcctcctatttttgttagttttttatta
tcactattagtgatttctttattaaaaaaaatttctccaacgctttttccgtaaaaattt
gctactttaatctttgttttatctgaactacctcgataacctgcttccattttagaaagt
aaactataagaaataccgatagcctcagctgcttctaattgtgtaatacctttagcaatg
cgaatttttttgagattattaatattaatcaccgcctttatcactctatgtgataataat
actatcactttacgtgattgtcaatcacttt

Assignments for Essentially Identical Proteins


Id	Organism	Who	Assignment
emb\|CAB53825.1	Listeria phage A118	EMBL	gp37-1
emb\|CAC95308.1	Listeria innocua	EMBL	lin0075
fig\|40521.1.peg.39	Bacteriophage A118	FIG	Phage protein
gi\|16412495	Listeria innocua	NCBI	lin0075
gi\|16798822	Listeria phage A118	NCBI	gp37-1
gi\|16799153	Listeria innocua Clip11262	NCBI	hypothetical protein lin0075
gi\|254825101	Listeria monocytogenes FSL J1-194	NCBI	hypothetical protein LmonFS_08048
gi\|254901049	Listeria monocytogenes J0161	NCBI	hypothetical protein LmonJ_14583
gi\|254914001	Listeria monocytogenes J2818	NCBI	hypothetical protein LmonJ2_14433
gi\|5823637	Listeria phage A118	NCBI	gp37-1
img\|637222791	Listeria innocua Clip11262	IMG	hypothetical protein
img\|638289517	Listeria phage A118	IMG	gp37-1
img\|640974080	Listeria monocytogenes J0161	IMG	hypothetical protein
img\|641752712	Listeria monocytogenes FSL J1-194	IMG	hypothetical protein
kegg\|lin:lin0075	Listeria innocua CLIP 11262 (serotype 6a)	KEGG	hypothetical protein
ref\|NP_463500.1	Listeria phage A118	RefSeq	gp37-1
ref\|NP_469421.1	Listeria innocua Clip11262	RefSeq	hypothetical protein lin0075
ref\|ZP_05230102.1	Listeria monocytogenes FSL J1-194	RefSeq	hypothetical protein LmonFS_08048
ref\|ZP_05260973.1	Listeria monocytogenes J0161	RefSeq	hypothetical protein LmonJ_14583
ref\|ZP_05264013.1	Listeria monocytogenes J2818	RefSeq	hypothetical protein LmonJ2_14433
tr\|Q92FM9	Listeria innocua	TrEMBL	Lin0075 protein
tr\|Q9T185	Listeria phage A118 (Bacteriophage A118)	TrEMBL	Gp37-1

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Functional Coupling


Score	Peg	Function

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Protein Families

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