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Protein fig|393117.11.peg.1612: Listeria monocytogenes FSL J1-194

This feature in The SEED Viewer

NCBI Taxonomy Id: 393117

Current Assignment: Integrase [Bacteriophage A118]
Translate Function Assignments



Context on contig NZ_AARJ02000004 from base 34887 to 47854 (12968 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1606 36212 34887 1326 -       1: 1   Aminopeptidase C (EC 3.4.22.40) locus|LmonFS_020200007978, protein_id|ZP_05230088.1, gi|254825087, CDD:111893
1607 36384 37136 753 + 171         Transcriptional repressor of the fructose operon, DeoR family locus|LmonFS_020200007983, protein_id|ZP_05230089.1, gi|254825088, CDD:31540
1608 37133 38056 924 + -4         Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56) locus|LmonFS_020200007988, protein_id|ZP_05230090.1, gi|254825089, CDD:132212
1609 38058 39956 1899 + 1         PTS system, fructose-specific IIA component / PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component locus|LmonFS_020200007993, protein_id|ZP_05230091.1, gi|254825090, CDD:137510
1610 40062 40409 348 + 105         Phage transcriptional regulator cro locus|LmonFS_020200007998, protein_id|ZP_05230092.1, gi|254825091, CDD:28977
1611 40940 40464 477 - 54         Competence transcription factor locus|LmonFS_020200008003, protein_id|ZP_05230093.1, gi|254825092, CDD:34512
1612 42289 40931 1359 - -10       Integrase [Bacteriophage A118] locus|LmonFS_020200008008, protein_id|ZP_05230094.1, gi|254825093, CDD:129090
1613 43093 42353 741 - 63         putative superinfection immunity protein locus|LmonFS_020200008013, protein_id|ZP_05230095.1, gi|254825094
1614 43837 43115 723 - 21         Phage A118 gp33 protein homolog locus|LmonFS_020200008018, protein_id|ZP_05230096.1, gi|254825095, CDD:118382
1615 44071 43853 219 - 15         Protein gp34 [Bacteriophage A118] locus|LmonFS_020200008023, protein_id|ZP_05230097.1, gi|254825096
1616 44585 44094 492 - 22         Phage protein locus|LmonFS_020200008028, protein_id|ZP_05230098.1, gi|254825097, CDD:114812
1617 44923 44618 306 - 32         Repressor (CI-like) [Bacteriophage A118] locus|LmonFS_020200008033, protein_id|ZP_05230099.1, gi|254825098, CDD:128803
1618 45049 45291 243 + 125         Repressor (cro-like) [Bacteriophage A118] locus|LmonFS_020200008038, protein_id|ZP_05230100.1, gi|254825099, CDD:128803
1619 45295 45561 267 + 3         Protein gp37 [Bacteriophage A118] locus|LmonFS_020200008043, protein_id|ZP_05230101.1, gi|254825100
1620 45720 45490 231 - -72         Phage protein locus|LmonFS_020200008048, protein_id|ZP_05230102.1, gi|254825101
1621 45786 45980 195 + 65         FIG00774265: hypothetical protein locus|LmonFS_020200008053, protein_id|ZP_05230103.1, gi|254825102
1622 45992 46276 285 + 11         FIG00774252: hypothetical protein locus|LmonFS_020200008058, protein_id|ZP_05230104.1, gi|254825103
1623 46302 46583 282 + 25         Protein gp41 [Bacteriophage A118] locus|LmonFS_020200008063, protein_id|ZP_05230105.1, gi|254825104
1624 46615 46776 162 + 31         FIG00775553: hypothetical protein locus|LmonFS_020200008068, protein_id|ZP_05230106.1, gi|254825105
1625 47011 46769 243 - -8         Hypothetical protein, Lin0079 homolog [Bacteriophage A118] locus|LmonFS_020200008073, protein_id|ZP_05230107.1, gi|254825106
1626 47075 47854 780 + 63 4     Phage antirepressor protein / Antirepressor [Bacteriophage A118] locus|LmonFS_020200008078, protein_id|ZP_05230108.1, gi|254825107, CDD:112200

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|393117.11.peg.1612 Integrase [Bacteriophage A118]
MKAAIYIRVSTQEQVENYSIQAQTEKLTALCRSKDWDVYDIFIDGGYSGSNMNRPALNEM
LSKLHEIDAVVVYRLDRLSRSQRDTITLIEEYFLKNNVEFVSLSETLDTSSPFGRAMIGI
LSVFAQLERETIRDRMVMGKIKRIEAGLPLTTAKGRTFGYDVIDTKLYINEEEAKQLQMI
YDIFEEEKSITSLQKRLKKLGFKVKSYSSYNNWLTNDLYCGYVSYADKVHTKGVHEPIIS
EEQFYRVQEIFSRMGKNPNMNRDSASLLNNLVVCSKCGLGFVHRRKDTVSRGKKYHYRYY
SCKTYKHTHELEKCGNKIWRADKLEELIIDRVNNYSFASRNVDKEDELDNLNEKLKTEHT
KKKRLFDLYISGSYEVSELDAMMADIDAQINYYEAQIEANEELKKNKKIQENLADLATVD
FDSLEFREKQLYLKSLINKIYIDGEQVTIEWL

MD5 = d1843be6d40b8527b993fae2e51db3ae


  DNA Sequence

>fig|393117.11.peg.1612 Integrase [Bacteriophage A118]
atgaaggcagctatttatatacgtgtttctactcaagagcaagtagaaaattattcaata
caagctcaaactgaaaaactaacagcattgtgccgctcgaaggactgggacgtatacgat
attttcattgacggcggatactccggctcaaatatgaatcgtcccgcattaaatgaaatg
ctaagtaaactacacgaaattgatgctgtagtcgtatatcgattagacagactatcccgc
tcacaaagagatacgataacgcttattgaagaatacttcttaaaaaacaatgtagaattt
gttagtctgtctgaaacgcttgatactagttcacccttcggtcgtgcaatgattggtata
ttgtccgtattcgctcaattagagcgcgaaactatacgagatcgaatggtgatggggaaa
attaagcgtattgaagcaggtcttcctttaacgaccgcaaaaggtagaacgttcggctat
gatgttatagatactaaattgtatattaatgaagaagaagcaaaacaattacaaatgatt
tatgatatttttgaggaagaaaaaagcattacatctttacagaaacgactaaaaaaatta
gggttcaaagtcaaatcatatagtagttacaataattggctaactaatgatttatactgt
ggttatgtatcttatgcggataaagtgcatacaaaaggtgttcatgagcctattatttca
gaggaacaattttatagagttcaagaaatattttcgcgcatgggtaaaaatccaaatatg
aatagagattcagcatccttgctaaataatttggtagtgtgtagtaaatgcggattaggg
tttgttcatcggagaaaagatactgtttcccgcggaaagaaatatcattatagatattat
agttgcaagacttacaaacatactcatgaactagaaaaatgtggaaataaaatttggaga
gctgacaaactcgaggaattaattattgatcgcgtgaataactatagtttcgcttctagg
aatgtagataaagaagacgaattagataacttaaatgaaaaacttaaaacagaacacaca
aaaaagaagcggctgtttgatttatatatcagtggttcttacgaagtttcagaacttgat
gctatgatggctgatatcgatgctcaaattaattattatgaagcacaaatagaagctaac
gaagaattgaagaaaaataaaaagatacaagaaaatttagctgatttagcaacagttgat
tttgactctttagagttccgagaaaagcaactttatttaaaatcactaattaataaaatt
tatattgacggtgaacaagttactattgaatggctctag


  DNA with Flanking Sequence

>fig|393117.11.peg.1612 Integrase [Bacteriophage A118]
ttcaatatactgttacagctaaagaagctggaaaaactgataatgtacaaattgtaacta
tacttccacccactctgaaagaatacagcgttggtgatacacaagaaatcggcgggataa
aagtaactttaactagtgttgagaaaacgaacgaaagaaatcaatttgatgataccaagc
ctaagaatgtagttaaaataagttataaagttgaaaataattctggatccgagtattttg
ttgattctgatattgatgtatatgattctaaaggcacgatgggtgaaagatacccactcg
acaacacgaccggaaaaataccaaacggaaaaaatatgaatgcacaattccatgcaggga
ttaatgaaagcggaaatattgaaatcatctttaacttattttccgatgcaaatttaactt
ttcatgcaaaaatttaaaagagagcctcctggcttttctttttaccgaaaaaagaacata
cgtacggaaggagaaaggaaatgaaggcagctatttatatacgtgtttctactcaagagc
aagtagaaaattattcaatacaagctcaaactgaaaaactaacagcattgtgccgctcga
aggactgggacgtatacgatattttcattgacggcggatactccggctcaaatatgaatc
gtcccgcattaaatgaaatgctaagtaaactacacgaaattgatgctgtagtcgtatatc
gattagacagactatcccgctcacaaagagatacgataacgcttattgaagaatacttct
taaaaaacaatgtagaatttgttagtctgtctgaaacgcttgatactagttcacccttcg
gtcgtgcaatgattggtatattgtccgtattcgctcaattagagcgcgaaactatacgag
atcgaatggtgatggggaaaattaagcgtattgaagcaggtcttcctttaacgaccgcaa
aaggtagaacgttcggctatgatgttatagatactaaattgtatattaatgaagaagaag
caaaacaattacaaatgatttatgatatttttgaggaagaaaaaagcattacatctttac
agaaacgactaaaaaaattagggttcaaagtcaaatcatatagtagttacaataattggc
taactaatgatttatactgtggttatgtatcttatgcggataaagtgcatacaaaaggtg
ttcatgagcctattatttcagaggaacaattttatagagttcaagaaatattttcgcgca
tgggtaaaaatccaaatatgaatagagattcagcatccttgctaaataatttggtagtgt
gtagtaaatgcggattagggtttgttcatcggagaaaagatactgtttcccgcggaaaga
aatatcattatagatattatagttgcaagacttacaaacatactcatgaactagaaaaat
gtggaaataaaatttggagagctgacaaactcgaggaattaattattgatcgcgtgaata
actatagtttcgcttctaggaatgtagataaagaagacgaattagataacttaaatgaaa
aacttaaaacagaacacacaaaaaagaagcggctgtttgatttatatatcagtggttctt
acgaagtttcagaacttgatgctatgatggctgatatcgatgctcaaattaattattatg
aagcacaaatagaagctaacgaagaattgaagaaaaataaaaagatacaagaaaatttag
ctgatttagcaacagttgattttgactctttagagttccgagaaaagcaactttatttaa
aatcactaattaataaaatttatattgacggtgaacaagttactattgaatggctctagt
agcttgtttatttagattgtttagttcctcgtttcctctcgttggacgcaaagagggaac
taaacacttaattggtgttacccataagccacccattatcattgacccagtcacttctac
ttatgtatttccaactgtagcacctagttcaacagaatgtatttggattttcccacaaca
tattaaagattatcatgcaattggatttaaccacactttaataacattttctaatatgga
aacctttgagattgatatgtctttagcatcttttaataatcagattgctagaacctccat
gttacatatgaaattttctcaaaaaatgcgtataatggagagtaattttccttcaatgaa
taggtttttcccaccaaccactcttgctgctgaacctagacgttattacagcaccatgct
tccaaataacgaagatcctaatgagcctcaagatcctgagcagtaactttaaaaccaaat
aaaagccagttacataata


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
fig|393117.3.peg.2552 Listeria monocytogenes FSL J1-194 FIG   Integrase [Bacteriophage A118]
fig|393130.3.peg.1877 Listeria monocytogenes J0161 FIG   Integrase [Bacteriophage A118]
fig|393130.8.peg.2909 Listeria monocytogenes J0161 FIG   Integrase [Bacteriophage A118]
fig|393131.3.peg.2239 Listeria monocytogenes J2818 FIG   Integrase [Bacteriophage A118]
gi|254825093 Listeria monocytogenes FSL J1-194 NCBI   putative integrase
gi|254901041 Listeria monocytogenes J0161 NCBI   putative integrase
img|640974072 Listeria monocytogenes J0161 IMG   hypothetical protein
img|640976188 Listeria monocytogenes J2818 IMG   hypothetical protein
img|641752721 Listeria monocytogenes FSL J1-194 IMG   putative integrase
ref|ZP_05230094.1 Listeria monocytogenes FSL J1-194 RefSeq   putative integrase
ref|ZP_05260965.1 Listeria monocytogenes J0161 RefSeq   putative integrase


  Links to Related Entries in Other Sites

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  Functional Coupling

Score Peg Function
4 fig|393117.11.peg.1626 Phage antirepressor protein / Antirepressor [Bacteriophage A118]


  Attributes

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  Protein Families

No protein families found

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