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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED


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Protein fig|391037.3.peg.3648: Salinispora arenicola CNS-205

This feature in The SEED Viewer

NCBI Taxonomy Id: 391037

Current Assignment: Phage antirepressor protein
Translate Function Assignments


Context on contig CP000850 from base 4312293 to 4326066 (13774 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
3637 4314917 4312293 2625 -           Phage primase Sare_3780, ABV99573.1, gi|157918146, InterPro:IPR006500, InterPro:IPR014015, InterPro:IPR014818
3638 4315596 4315024 573 - 106     1: 1   hypothetical protein Sare_3781, ABV99574.1, gi|157918147
3639 4316726 4315665 1062 - 68     1: 1   hypothetical protein Sare_3782, ABV99575.1, gi|157918148
3640 4316881 4316723 159 - -4     1: 1   hypothetical protein Sare_3783, ABV99576.1, gi|157918149
3641 4317257 4317078 180 - 196     1: 1   hypothetical protein Sare_3784, ABV99577.1, gi|157918150
3642 4317529 4317254 276 - -4         FIG01042497: hypothetical protein Sare_3785, ABV99578.1, gi|157918151
3643 4318149 4317529 621 - -1         Phage encoded pentapeptide repeat family protein Sare_3786, ABV99579.1, gi|157918152, InterPro:IPR001646
3644 4318376 4318146 231 - -4         FIG01043212: hypothetical protein Sare_3787, ABV99580.1, gi|157918153
3645 4318617 4318378 240 - 1         FIG01042697: hypothetical protein Sare_3788, ABV99581.1, gi|157918154
3646 4319057 4318614 444 - -4     1: 1   hypothetical protein Sare_3789, ABV99582.1, gi|157918155
3647 4319344 4319129 216 - 71     1: 1   hypothetical protein Sare_3790, ABV99583.1, gi|157918156
3648 4320192 4319341 852 - -4         Phage antirepressor protein Sare_3791, ABV99584.1, gi|157918157, InterPro:IPR003497
3649 4320467 4320189 279 - -4     1: 1   Phage excisionase Sare_3792, ABV99585.1, gi|157918158
3650 4320763 4321098 336 + 295     1: 1   hypothetical protein Sare_3793, ABV99586.1, gi|157918159
3651 4321098 4322435 1338 + -1         Phage integrase Sare_3794, ABV99587.1, gi|157918160, InterPro:IPR002104
rna.39 4322549 4322473 77 - 37     1: 4   tRNA-Met tRNA-Met
3652 4323932 4322691 1242 - 141     2: 2 3   Phytoene dehydrogenase and related proteins Sare_3795, ABV99588.1, gi|157918161, InterPro:IPR002937, InterPro:IPR013027
3653 4326066 4323922 2145 - -11         Integral membrane protein Strop_2920/Strop_3419, MMPL dimer type Sare_3796, ABV99589.1, gi|157918162, InterPro:IPR000731, InterPro:IPR004869

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|391037.3.peg.3648 Phage antirepressor protein
MTHPQGPAGPGPGGTTGPGREITTFEFGDLPLRTVTVGNEPWFVAVDVCRALEIGNPRQA
VSYLDDDEVRQAPVTTDDGSDRVLMTNVVSEAGLYSLILRSRKPEAKAFKRWVTHDVLPA
IRATGRYESVPAVPQSYADALQLAADQARQLDAQAAELAEAAPKAASWDTLASAEGDWSV
RDAAKVLSRDPGLDLGERRLFTVLGEQQWIYRQRADGRWRPYQRAIESGWLSELPSTHYH
PRTGELVLDTPQVRVTTRGLHLLHRRLGGTQPLRTHEQTALIQ

MD5 = 4cf79997004e9a2a812230d8af777c76


  DNA Sequence

>fig|391037.3.peg.3648 Phage antirepressor protein
atgactcatccccaaggccccgccggacctggacctggcggcaccaccggtcccggccgc
gagatcacaacctttgaattcggcgatctcccgttgcggacggtcacggttggcaatgag
ccgtggttcgtcgctgtcgacgtgtgtagggcactggagatcggcaacccgcgccaagcg
gtgagctacctcgacgacgatgaggtgcggcaggcacccgtcactactgatgacgggtcg
gaccgggtgctcatgacgaacgtcgtcagcgaggccgggctgtactcactgattctccgt
agtcgcaagccggaggcgaaggcgttcaagcgctgggtgacccacgacgtgttgcccgcg
attcgggcgacgggccggtacgagtcggtgccggcggtgccgcagtcgtacgcggatgcg
ttgcagcttgccgcggatcaggcccggcagcttgacgcgcaggccgccgagttggcggag
gccgcgccgaaggcggcgtcgtgggacaccctcgcctcggcggagggcgactggtccgtg
cgggacgccgccaaggtgctatcgcgcgatccgggtctggacctcggggagcgacgcctg
ttcacggttctcggcgagcagcagtggatctatcggcagcgtgctgacggtcgttggcgg
ccgtaccagcgggcgatcgagtcgggctggctgtcggagctgccctcgacgcactaccac
ccgcgcaccggtgagctggtgctcgatacgcctcaggtgcgggtcaccacccggggcctg
catctgctgcaccgccggcttggcggtacgcagccgttgcggacgcatgagcagacggcg
ctgatccagtga


  DNA with Flanking Sequence

>fig|391037.3.peg.3648 Phage antirepressor protein
gacggtgtaggggatggggatgctgccacgaggtcaccgtaggtgccattcgcgggcctg
ttatctcgtggacggcagcgatgccgtggacggttgcggtgacgtgcgccgatagtgcgc
ggtctcagctggaggactcttggtcctgcacggctatgcatggcttacagggtagctctg
gtggccaggtgcagaatcatccgaacggccgatgtgatgctatgcgtggcattgcgatac
ggtagtgccatgcatggcaacgcatcacacagcaatgctgcgagtggcactgaatcggag
cagatcgcctacaaggtgccgcgtgcagctgagctcttggacctgggcccgcggaccgtc
tggcaactcgtcaaggacgaggaagacgaacccggtactggcatcgagtcgatcaaggtc
ggttggtcccgacgcgtgccccgtactgccctcctcgcctttatggaacggaagcgtgcc
cagggtcgggcggtgtccgaatgactcatccccaaggccccgccggacctggacctggcg
gcaccaccggtcccggccgcgagatcacaacctttgaattcggcgatctcccgttgcgga
cggtcacggttggcaatgagccgtggttcgtcgctgtcgacgtgtgtagggcactggaga
tcggcaacccgcgccaagcggtgagctacctcgacgacgatgaggtgcggcaggcacccg
tcactactgatgacgggtcggaccgggtgctcatgacgaacgtcgtcagcgaggccgggc
tgtactcactgattctccgtagtcgcaagccggaggcgaaggcgttcaagcgctgggtga
cccacgacgtgttgcccgcgattcgggcgacgggccggtacgagtcggtgccggcggtgc
cgcagtcgtacgcggatgcgttgcagcttgccgcggatcaggcccggcagcttgacgcgc
aggccgccgagttggcggaggccgcgccgaaggcggcgtcgtgggacaccctcgcctcgg
cggagggcgactggtccgtgcgggacgccgccaaggtgctatcgcgcgatccgggtctgg
acctcggggagcgacgcctgttcacggttctcggcgagcagcagtggatctatcggcagc
gtgctgacggtcgttggcggccgtaccagcgggcgatcgagtcgggctggctgtcggagc
tgccctcgacgcactaccacccgcgcaccggtgagctggtgctcgatacgcctcaggtgc
gggtcaccacccggggcctgcatctgctgcaccgccggcttggcggtacgcagccgttgc
ggacgcatgagcagacggcgctgatccagtgaccgccgccgctctgctggcccgcgcggt
cgcccagatcgtgaccggtttggcgctggtcgccgctggtctcaccgcgccaccggtgcc
gccggccccggcctcggactcgagtcccggcctggagtggcgttccgccaccgacgccga
gaggcgggagtggcagcgacagcgcctgttcgacctcatcgacgcgaagcggtcgatgaa
gtgagccccccgccgatctgcggtcggcgaagggctcgacacccggaccagaacctgatc
aaccaaggagtccagatgcaatcgcagagtaacccaaccactgagcggccagtctgcgcc
gccgcccaggccgacgctgagccggccacgccgcacctggccgagccgggctacatgtcc
tgcccgcgtgagtgcggggtggacgtgcgcgagcacaactcgtccggcctgatcgatggc
cggtgcgacacggactactggctggccctcgctgccgacctgcgtgcggtgg


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
GO:0003677       F:DNA binding
fig|391037.3.peg.3597 Salinispora arenicola CNS-205 FIG   Phage antirepressor protein
gb|ABV99533.1 Salinispora arenicola CNS-205     prophage antirepressor
gb|ABV99584.1 Salinispora arenicola CNS-205     prophage antirepressor
gi|157918106 Salinispora arenicola CNS-205 NCBI   prophage antirepressor
gi|157918157 Salinispora arenicola CNS-205 NCBI   prophage antirepressor
gi|159039271 Salinispora arenicola CNS-205 NCBI   prophage antirepressor
gi|159039322 Salinispora arenicola CNS-205 NCBI   prophage antirepressor
img|640042549 Salinispora arenicola CNS205 IMG   BRO-like
img|641273160 Salinispora arenicola CNS-205 IMG   prophage antirepressor
img|641273211 Salinispora arenicola CNS-205 IMG   prophage antirepressor
kegg|saq:Sare_3740 Salinispora arenicola CNS-205 KEGG   prophage antirepressor
kegg|saq:Sare_3791 Salinispora arenicola CNS-205 KEGG   prophage antirepressor
ref|YP_001538524.1 Salinispora arenicola CNS-205 RefSeq   prophage antirepressor
ref|YP_001538575.1 Salinispora arenicola CNS-205 RefSeq   prophage antirepressor
tr|A8M019 Salinispora arenicola (strain CNS-205) TrEMBL   Prophage antirepressor


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  Attributes

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  Protein Families

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