The SEED: an Annotation/Analysis Tool Provided by FIG
[ Subsystem Forum | Essentiality Data | FIG Tutorials | Peer-to-peer Updates | (New) Clearinghouse | SEED Control Panel | NMPDR | SEED Wiki] [GOLD | "Complete" Genomes in SEED | ExPASy | IMG | KEGG | NCBI | TIGR cmr | UniProt | Report "Bugz"]
|
![]() |
Fid | Start | End | Size (nt) |
Gap | Find best clusters |
Pins | Fc-sc | SS | Ev | Function | Aliases | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
20 | 10433 | 11212 | 780 | + | ![]() |
Phage DNA helicase loader | protein_id|ABF73245.1, gi|104641937 | |||||
21 | 11206 | 11364 | 159 | + | -7 | ![]() |
Phage protein | protein_id|ABF73246.1, gi|104641938 | ||||
22 | 11377 | 11598 | 222 | + | 12 | ![]() |
Phage phi 11 orf17 protein homolog | protein_id|ABF73247.1, gi|104641939 | ||||
23 | 11608 | 12015 | 408 | + | 9 | ![]() |
Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4) | protein_id|ABF73248.1, gi|104641940 | ||||
24 | 12015 | 12200 | 186 | + | -1 | ![]() |
Phage phi 11 orf19 protein homolog | protein_id|ABF73249.1, gi|104641941 | ||||
25 | 12201 | 12560 | 360 | + | 0 | ![]() |
Phage phi 11 orf21 protein homolog | protein_id|ABF73250.1, gi|104641942 | ||||
26 | 12560 | 12814 | 255 | + | -1 | ![]() |
Phage protein | protein_id|ABF73251.1, gi|104641943 | ||||
27 | 12820 | 13062 | 243 | + | 5 | ![]() |
Phage phi 11 orf22 protein homolog | protein_id|ABF73252.1, gi|104641944 | ||||
28 | 13077 | 13478 | 402 | + | 14 | ![]() |
Phage protein | protein_id|ABF73253.1, gi|104641945 | ||||
29 | 13475 | 13669 | 195 | + | -4 | ![]() |
Phage protein | protein_id|ABF73254.1, gi|104641946 | ||||
30 | 13666 | 14115 | 450 | + | -4 | ![]() |
Phage protein | protein_id|ABF73255.1, gi|104641947 | ||||
31 | 14112 | 14396 | 285 | + | -4 | ![]() |
Phage protein | protein_id|ABF73256.1, gi|104641948 | ||||
32 | 14389 | 14637 | 249 | + | -8 | ![]() |
Phage phi 11 orf23 protein homolog | protein_id|ABF73257.1, gi|104641949 | ||||
33 | 14630 | 15166 | 537 | + | -8 | ![]() |
1: 3 | Phage dimeric dUTPase (EC 3.6.1.23) | protein_id|ABF73258.1, gi|104641950 | |||
34 | 15203 | 15409 | 207 | + | 36 | ![]() |
Phage phi 11 orf26a protein homolog | protein_id|ABF73259.1, gi|104641951 | ||||
35 | 15406 | 15600 | 195 | + | -4 | ![]() |
Hypothetical protein, SAV0878 homolog [SA bacteriophages 11, Mu50B] | protein_id|ABF73260.1, gi|104641952 | ||||
36 | 15597 | 15800 | 204 | + | -4 | ![]() |
Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B] | protein_id|ABF73261.1, gi|104641953 | ||||
37 | 15793 | 16029 | 237 | + | -8 | ![]() |
Phage protein | protein_id|ABF73262.1, gi|104641954 | ||||
38 | 16022 | 16408 | 387 | + | -8 | ![]() |
Hypothetical protein, SAV0881 homolog [SA bacteriophages 11, Mu50B] | protein_id|ABF73263.1, gi|104641955 | ||||
39 | 16405 | 16578 | 174 | + | -4 | ![]() |
Phage integrase regulator RinB | protein_id|ABF73264.1, gene_name|rinB, gi|104641956 | ||||
40 | 16579 | 16980 | 402 | + | 0 | ![]() |
Phage integrase regulator RinA | protein_id|ABF73265.1, gi|104641957 | ||||
41 | 17364 | 17825 | 462 | + | 383 | ![]() |
Phage terminase, small subunit | protein_id|ABF73266.1, gi|104641958 | ||||
42 | 17818 | 19041 | 1224 | + | -8 | ![]() |
2: 2 1 | Phage terminase, large subunit | protein_id|ABF73267.1, gi|104641959 | |||
43 | 19038 | 20462 | 1425 | + | -4 | ![]() |
2: 2 1 | Phage portal (connector) protein | protein_id|ABF73268.1, gi|104641960 | |||
44 | 20431 | 21384 | 954 | + | -32 | ![]() |
1: 1 | isu | Phage minor capsid protein | protein_id|ABF73269.1, gi|104641961 |
Annotation History / View All Related Annotations | Help on Annotations |
Score | Peg | Function |
---|
Key Link Explains Key |
Value |
---|
Compare Regions |
| Psi-Blast | TMpred | TMHMM | Gram negative PSORT | Gram negative SignalP | Gram positive PSORT | Gram positive SignalP | LipoP | Radar | PPSearch | Gram negative CELLO | Gram positive CELLO | ProDom | PDB | RNAFold |
> Show tool descriptions