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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|387910.2.peg.36: Siphoviridae Staphylococcus aureus phage phiNM4

This feature in The SEED Viewer

NCBI Taxonomy Id: 387910

Current Assignment: Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
Translate Function Assignments


Context on contig DQ530362 from base 10433 to 21384 (10952 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
20 10433 11212 780 +           Phage DNA helicase loader protein_id|ABF73245.1, gi|104641937
21 11206 11364 159 + -7         Phage protein protein_id|ABF73246.1, gi|104641938
22 11377 11598 222 + 12         Phage phi 11 orf17 protein homolog protein_id|ABF73247.1, gi|104641939
23 11608 12015 408 + 9         Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4) protein_id|ABF73248.1, gi|104641940
24 12015 12200 186 + -1         Phage phi 11 orf19 protein homolog protein_id|ABF73249.1, gi|104641941
25 12201 12560 360 + 0         Phage phi 11 orf21 protein homolog protein_id|ABF73250.1, gi|104641942
26 12560 12814 255 + -1         Phage protein protein_id|ABF73251.1, gi|104641943
27 12820 13062 243 + 5         Phage phi 11 orf22 protein homolog protein_id|ABF73252.1, gi|104641944
28 13077 13478 402 + 14         Phage protein protein_id|ABF73253.1, gi|104641945
29 13475 13669 195 + -4         Phage protein protein_id|ABF73254.1, gi|104641946
30 13666 14115 450 + -4         Phage protein protein_id|ABF73255.1, gi|104641947
31 14112 14396 285 + -4         Phage protein protein_id|ABF73256.1, gi|104641948
32 14389 14637 249 + -8         Phage phi 11 orf23 protein homolog protein_id|ABF73257.1, gi|104641949
33 14630 15166 537 + -8     1: 3   Phage dimeric dUTPase (EC 3.6.1.23) protein_id|ABF73258.1, gi|104641950
34 15203 15409 207 + 36         Phage phi 11 orf26a protein homolog protein_id|ABF73259.1, gi|104641951
35 15406 15600 195 + -4         Hypothetical protein, SAV0878 homolog [SA bacteriophages 11, Mu50B] protein_id|ABF73260.1, gi|104641952
36 15597 15800 204 + -4         Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B] protein_id|ABF73261.1, gi|104641953
37 15793 16029 237 + -8         Phage protein protein_id|ABF73262.1, gi|104641954
38 16022 16408 387 + -8         Hypothetical protein, SAV0881 homolog [SA bacteriophages 11, Mu50B] protein_id|ABF73263.1, gi|104641955
39 16405 16578 174 + -4         Phage integrase regulator RinB protein_id|ABF73264.1, gene_name|rinB, gi|104641956
40 16579 16980 402 + 0         Phage integrase regulator RinA protein_id|ABF73265.1, gi|104641957
41 17364 17825 462 + 383         Phage terminase, small subunit protein_id|ABF73266.1, gi|104641958
42 17818 19041 1224 + -8     2: 2 1   Phage terminase, large subunit protein_id|ABF73267.1, gi|104641959
43 19038 20462 1425 + -4     2: 2 1   Phage portal (connector) protein protein_id|ABF73268.1, gi|104641960
44 20431 21384 954 + -32     1: 1 isu Phage minor capsid protein protein_id|ABF73269.1, gi|104641961

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|387910.2.peg.36 Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
MNQLRILLHDGSSLILHEDELFNEIVFVLDNFRNDDDYLTIEKDYGRELVLNKGYIVGIN
VEEADDD

MD5 = 8562c709e473e5af621c7c2ff62a9395


  DNA Sequence

>fig|387910.2.peg.36 Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
atgaatcagctgagaattttattacatgacggtagtagtttgatattacatgaagatgaa
ttatttaacgaaatagtatttgttttggacaattttagaaatgatgatgactatttaacg
atagaaaaagattatggcagagaacttgtattgaacaaaggttatatagttgggatcaat
gttgaggaggcagatgatgattaa


  DNA with Flanking Sequence

>fig|387910.2.peg.36 Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
caaaaagaaaatgaaaaggaatcatgaaagacaagatggaacagcagacgcaggaaaagg
atacgtgtaaagacatattagatcgagtcaaggaggttttggggaagtgacacaatactt
agtcacaacattcaaagattcaacaggacgtaaacatacacacataactaaagctaagag
taatcaaaggtttacagtcgttgaggcagagagtaaagaagaagcgaaagagaagtacga
ggcacaagttaaaagagatgcagttattaaagtgggtcagttgtatgaaaatataaggga
gtgtgggaaatgacggatgttaaaattaaaactatttcaggtggagtttattttgtaaaa
acagctgaaccttttgaaaaatatgttgaaagaatgacgagttttaatggttatatttac
gcaagtactataatcaagaaaccaacgtatattaaaacagatacgattgaatcaatcaca
cttattgaggagcatgggaaatgaatcagctgagaattttattacatgacggtagtagtt
tgatattacatgaagatgaattatttaacgaaatagtatttgttttggacaattttagaa
atgatgatgactatttaacgatagaaaaagattatggcagagaacttgtattgaacaaag
gttatatagttgggatcaatgttgaggaggcagatgatgattaacatacctaaaatgaaa
ttcccgaaaaagtacactgaaataatcaaaaaatataaaaataaaacacctgaagaaaaa
gctaagattgaagatgatttcattaaagaaattaatgataaagacagtgaattttacagt
cctatgatggctaatatgaatgaacatgaattaagggctatgttaagaatgatgcctagt
ttaattgatactggagatggcaatgatgattaaaaaacttaaaaatatggattggttcga
tatctttattgctggaatactgcgattattcggcgtaatcgcactgatgcttgttgtcat
atcgcctatatacacagtggctagttaccaacacaaagaagtacatcaagggacaattac
agataaatataacaagagacaagataaagaagacaagttctatattgtattagacaacaa
acaagtcattgaaaattctgatttattattcaaaaagaaatttgatagcgcagacataca
agct


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
cmr|NT02SA0872 Staphylococcus aureus Mu50     aminotransferase
cmr|SACOL0360 Staphylococcus aureus subsp. aureus COL     hypothetical protein
dbj|BAB57041.1 Staphylococcus aureus subsp. aureus Mu50     hypothetical protein
dbj|BAF77757.1 Staphylococcus aureus subsp. aureus Mu3     hypothetical protein
fig|158878.1.peg.879 Staphylococcus aureus subsp. aureus Mu50 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|158878.14.peg.907 Staphylococcus aureus subsp. aureus Mu50 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|259901.1.peg.61 Bacteriophage 77 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|320834.3.peg.71 Bacteriophage 69 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|359786.13.peg.951 Staphylococcus aureus subsp. aureus JH9 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|359786.3.peg.2077 Staphylococcus aureus subsp. aureus JH9 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|359787.11.peg.935 Staphylococcus aureus subsp. aureus JH1 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|359787.3.peg.2470 Staphylococcus aureus subsp. aureus JH1 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|418127.4.peg.811 Staphylococcus aureus subsp. aureus Mu3 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|418127.6.peg.893 Staphylococcus aureus subsp. aureus Mu3 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|426430.6.peg.289 Staphylococcus aureus subsp. aureus str. Newman FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|426430.8.peg.313 Staphylococcus aureus subsp. aureus str. Newman FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|505321.3.peg.1226 Staphylococcus aureus subsp. aureus str. CF-Marseille FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|553565.3.peg.618 Staphylococcus aureus A5937 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|553568.3.peg.1235 Staphylococcus aureus A6224 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|553577.3.peg.1385 Staphylococcus aureus A8796 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|553580.3.peg.1727 Staphylococcus aureus A8819 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|553588.3.peg.2423 Staphylococcus aureus A9719 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|553592.3.peg.2462 Staphylococcus aureus A9763 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|553596.3.peg.274 Staphylococcus aureus A9781 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|553601.3.peg.2472 Staphylococcus aureus A10102 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|585151.3.peg.1530 Staphylococcus aureus subsp. aureus C427 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|585155.3.peg.2582 Staphylococcus aureus subsp. aureus H19 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|585891.3.peg.906 Staphylococcus aureus subsp. aureus Mu50-omega FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|703339.3.peg.852 Staphylococcus aureus 04-02981 FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|93062.19.peg.346 Staphylococcus aureus subsp. aureus COL FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
fig|93062.4.peg.819 Staphylococcus aureus subsp. aureus COL FIG   Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]
gb|AAR87928.1 Bacteriophage 77     77ORF072
gb|AAW37567.1 Staphylococcus aureus subsp. aureus COL     hypothetical protein SACOL0360
gb|AAX90810.1 Bacteriophage 69     ORF071
gb|ABF73261.1 Staphylococcus aureus phage phiNM4     hypothetical protein
gb|ABR51755.1 Staphylococcus aureus subsp. aureus JH1     conserved hypothetical protein
gb|EEV25737.1 Staphylococcus aureus A9781     conserved hypothetical protein
gb|EEV63410.1 Staphylococcus aureus A9763     conserved hypothetical protein
gb|EEV66354.1 Staphylococcus aureus A9719     phage77_ORF072 protein
gb|EEV80701.1 Staphylococcus aureus A6224     conserved hypothetical protein
gb|EEV86513.1 Staphylococcus aureus A5937     conserved hypothetical protein
gi|104641953 Staphylococcus aureus phage phiNM4 NCBI   hypothetical protein
gi|14246648 Staphylococcus aureus subsp. aureus Mu50 NCBI   hypothetical protein
gi|149945819 Staphylococcus aureus subsp. aureus JH1 NCBI   conserved hypothetical protein
gi|150393367 Staphylococcus aureus subsp. aureus JH1 NCBI   hypothetical protein SaurJH1_0899
gi|156721340 Staphylococcus aureus subsp. aureus Mu3 NCBI   hypothetical protein
gi|156979205 Staphylococcus aureus subsp. aureus Mu3 NCBI   hypothetical protein SAHV_0874
gi|15923869 Staphylococcus aureus subsp. aureus Mu50 NCBI   hypothetical protein SAV0879
gi|253315715 Staphylococcus aureus subsp. aureus str. CF-Marseille NCBI   hypothetical protein SauraC_06146
gi|255005670 Staphylococcus aureus subsp. aureus Mu50-omega NCBI   hypothetical protein SauraM_04345
gi|257787397 Staphylococcus aureus A9781 NCBI   conserved hypothetical protein
gi|257793425 Staphylococcus aureus A9781 NCBI   conserved hypothetical protein
gi|257838931 Staphylococcus aureus A9763 NCBI   conserved hypothetical protein
gi|257841920 Staphylococcus aureus A9719 NCBI   phage77_ORF072 protein
gi|257857809 Staphylococcus aureus A6224 NCBI   conserved hypothetical protein
gi|257863757 Staphylococcus aureus A5937 NCBI   conserved hypothetical protein
gi|258418138 Staphylococcus aureus A9763 NCBI   conserved hypothetical protein
gi|258422088 Staphylococcus aureus A9719 NCBI   phage77_ORF072 protein
gi|258448913 Staphylococcus aureus A6224 NCBI   conserved hypothetical protein
gi|258453892 Staphylococcus aureus A5937 NCBI   conserved hypothetical protein
gi|40557272 Bacteriophage 77 NCBI   77ORF072
gi|41189571 Staphylococcus phage 77 NCBI   77ORF072
gi|57285473 Staphylococcus aureus subsp. aureus COL NCBI   hypothetical protein SACOL0360
gi|57651287 Staphylococcus aureus subsp. aureus COL NCBI   hypothetical protein SACOL0360
gi|62635699 Bacteriophage 69 NCBI   ORF071
gi|66395348 Staphylococcus phage 69 NCBI   ORF071
img|637099392 Staphylococcus aureus aureus Mu50 IMG   hypothetical protein
img|637151135 Staphylococcus aureus aureus COL IMG   hypothetical protein
img|638305539 Bacteriophage 77 IMG   77ORF072
img|638314054 Bacteriophage 69 IMG   ORF071
img|639108168 Staphylococcus aureus aureus JH1 IMG   conserved hypothetical protein
img|640778986 Staphylococcus aureus aureus JH1 IMG   hypothetical protein
img|640903615 Staphylococcus aureus aureus Mu3 IMG   hypothetical protein
kegg|sac:SACOL0360 Staphylococcus aureus subsp. aureus COL KEGG   hypothetical protein
kegg|sah:SaurJH1_0899 Staphylococcus aureus subsp. aureus JH1 KEGG   hypothetical protein
kegg|sav:SAV0879   KEGG   hypothetical protein
kegg|saw:SAHV_0874 Staphylococcus aureus subsp. aureus Mu3 KEGG   hypothetical protein
ref|NP_371403.1 Staphylococcus aureus subsp. aureus Mu50 RefSeq   hypothetical protein SAV0879
ref|NP_958662.1 Staphylococcus phage 77 RefSeq   77ORF072
ref|YP_001316042.1 Staphylococcus aureus subsp. aureus JH1 RefSeq   hypothetical protein SaurJH1_0899
ref|YP_001441464.1 Staphylococcus aureus subsp. aureus Mu3 RefSeq   hypothetical protein SAHV_0874
ref|YP_185252.1 Staphylococcus aureus subsp. aureus COL RefSeq   hypothetical protein SACOL0360
ref|YP_239635.1 Staphylococcus phage 69 RefSeq   ORF071
ref|ZP_04838928.1 Staphylococcus aureus subsp. aureus str. CF-Marseille RefSeq   hypothetical protein SauraC_06146
ref|ZP_05144271.2 Staphylococcus aureus subsp. aureus Mu50-omega RefSeq   hypothetical protein SauraM_04345
ref|ZP_05642404.1 Staphylococcus aureus A9781 RefSeq   conserved hypothetical protein
ref|ZP_05682403.1 Staphylococcus aureus A9763 RefSeq   conserved hypothetical protein
ref|ZP_05685003.1 Staphylococcus aureus A9719 RefSeq   phage77_ORF072 protein
ref|ZP_05697022.1 Staphylococcus aureus A6224 RefSeq   conserved hypothetical protein
ref|ZP_05701864.1 Staphylococcus aureus A5937 RefSeq   conserved hypothetical protein
tr|A0EX52 Staphylococcus aureus phage phiNM4 TrEMBL   Putative uncharacterized protein
tr|A6TZY7 Staphylococcus aureus (strain JH1) TrEMBL   Putative uncharacterized protein
tr|A7X070 Staphylococcus aureus (strain Mu3 / ATCC 700698) TrEMBL   Putative uncharacterized protein
tr|Q4ZDP1 Staphylococcus phage 69 TrEMBL   ORF071
tr|Q5HJ05 Staphylococcus aureus (strain COL) TrEMBL   Putative uncharacterized protein
tr|Q6R821 Staphylococcus phage 77 TrEMBL   77ORF072
tr|Q931Z3 Staphylococcus aureus (strain Mu50 / ATCC 700699) TrEMBL   Putative uncharacterized protein


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  Functional Coupling

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  Attributes

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  Protein Families

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