Protein Page for fig|387910.2.peg.26

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

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Protein fig|387910.2.peg.26: Siphoviridae Staphylococcus aureus phage phiNM4

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NCBI Taxonomy Id: 387910

Current Assignment: Phage protein

Translate Function Assignments

Context on contig DQ530362 from base 7390 to 17825 (10436 bp)


Fid	Start	End	Size (nt)		Gap	SS	Function	Aliases
16	7390	7941	552	+		1: 1	Phage ssDNA binding protein	protein_id\|ABF73241.1, gi\|104641933
17	7954	8625	672	+	12		Phage phi 11 orf14 protein homolog	protein_id\|ABF73242.1, gi\|104641934
18	9588	8731	858	-	105		Phage protein	protein_id\|ABF73243.1, gi\|104641935
19	9653	10423	771	+	64	1: 1	Phage DNA replication protein O	protein_id\|ABF73244.1, gi\|104641936
20	10433	11212	780	+	9		Phage DNA helicase loader	protein_id\|ABF73245.1, gi\|104641937
21	11206	11364	159	+	-7		Phage protein	protein_id\|ABF73246.1, gi\|104641938
22	11377	11598	222	+	12		Phage phi 11 orf17 protein homolog	protein_id\|ABF73247.1, gi\|104641939
23	11608	12015	408	+	9		Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4)	protein_id\|ABF73248.1, gi\|104641940
24	12015	12200	186	+	-1		Phage phi 11 orf19 protein homolog	protein_id\|ABF73249.1, gi\|104641941
25	12201	12560	360	+	0		Phage phi 11 orf21 protein homolog	protein_id\|ABF73250.1, gi\|104641942
26	12560	12814	255	+	-1		Phage protein	protein_id\|ABF73251.1, gi\|104641943
27	12820	13062	243	+	5		Phage phi 11 orf22 protein homolog	protein_id\|ABF73252.1, gi\|104641944
28	13077	13478	402	+	14		Phage protein	protein_id\|ABF73253.1, gi\|104641945
29	13475	13669	195	+	-4		Phage protein	protein_id\|ABF73254.1, gi\|104641946
30	13666	14115	450	+	-4		Phage protein	protein_id\|ABF73255.1, gi\|104641947
31	14112	14396	285	+	-4		Phage protein	protein_id\|ABF73256.1, gi\|104641948
32	14389	14637	249	+	-8		Phage phi 11 orf23 protein homolog	protein_id\|ABF73257.1, gi\|104641949
33	14630	15166	537	+	-8	1: 2	Phage dimeric dUTPase (EC 3.6.1.23)	protein_id\|ABF73258.1, gi\|104641950
34	15203	15409	207	+	36		Phage phi 11 orf26a protein homolog	protein_id\|ABF73259.1, gi\|104641951
35	15406	15600	195	+	-4		Hypothetical protein, SAV0878 homolog [SA bacteriophages 11, Mu50B]	protein_id\|ABF73260.1, gi\|104641952
36	15597	15800	204	+	-4		Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]	protein_id\|ABF73261.1, gi\|104641953
37	15793	16029	237	+	-8		Phage protein	protein_id\|ABF73262.1, gi\|104641954
38	16022	16408	387	+	-8		Hypothetical protein, SAV0881 homolog [SA bacteriophages 11, Mu50B]	protein_id\|ABF73263.1, gi\|104641955
39	16405	16578	174	+	-4		Phage integrase regulator RinB	protein_id\|ABF73264.1, gene_name\|rinB, gi\|104641956
40	16579	16980	402	+	0		Phage integrase regulator RinA	protein_id\|ABF73265.1, gi\|104641957
41	17364	17825	462	+	383		Phage terminase, small subunit	protein_id\|ABF73266.1, gi\|104641958

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Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|387910.2.peg.26 Phage protein
MSIISNRKVDMNETQDNVKQPAHYTYGDIEIIDFIEQVTAQYPPQLAFAIGNAIKYLSRA
PLKNGHEDMAKAKFYVDRVFDLWE

MD5 = be80d4ff440d8e2c04247312436a9ebc

DNA Sequence

>fig|387910.2.peg.26 Phage protein
atgagcataatcagtaacagaaaagtagatatgaatgaaacgcaagacaatgttaagcaa
ccagcacattacacatacggcgatattgaaattatagattttattgaacaagtaacggca
cagtatccaccacaattagcatttgcaataggtaatgcaatcaaatacttgtctagagca
ccgttaaagaatggtcatgaggatatggcaaaagcgaagttttatgtagatagagtgttt
gacttgtgggagtaa

DNA with Flanking Sequence

>fig|387910.2.peg.26 Phage protein
cctacagaagttgaatatcagtattttgatgatgtggatatcgaaaaagaagcgctggca
gattacttatataacaatccagacgaattactagagtatgacaatttaaaaattagaaat
gtaaatgtagaggtggaataaatgagtgtcgtgaagattaacggtaaaccatataaattt
accgaacatgaaaatgaattgataaaaaagaacgggttaactcctggaatggttgcaaaa
agagtacgtggtggctgggcgttgttagaagccttaaacgcaccttatggcatgcgctta
gctgagtataaagaaatcgtattatccagaattatgcaacgagagagcaaagaacgtgaa
atagctaggcaacgacgtaaagaggttgaactacgtaagaggaaaccacatttgtttaat
gtaccacaaaaacattcacgtgatccgtactggttcgatgtcacttataaccaaatgttc
aagaaatggagtgaagcataatgagcataatcagtaacagaaaagtagatatgaatgaaa
cgcaagacaatgttaagcaaccagcacattacacatacggcgatattgaaattatagatt
ttattgaacaagtaacggcacagtatccaccacaattagcatttgcaataggtaatgcaa
tcaaatacttgtctagagcaccgttaaagaatggtcatgaggatatggcaaaagcgaagt
tttatgtagatagagtgtttgacttgtgggagtaatgaccatgacagataacgcgcgtaa
agaatacttaaaccaatttttcggctctaagagatatctgtatcaggataacgagcgagt
ggcacatatccatgtagtgaatggcgcttattactttcacgggcatatcgtaccagattg
gcaaggtgtgaaaaagacatttgatacagcggaagagctcggaatatatataaagcaaca
tggtttggaatacgaggaacagaagcaactaactttattttagaggagatggaaacaatg
aaaatcaaagttaaaaaagaaatgctattagacgagttaattaaatgggcgcgagaaaat
ccggagctatcacaagggaaaatatttttttcaacaggatttagtgatggattcgttcgt
tttcatccaaatacaaataagtgttcgacgtcaagttttattccaattgatatccccttc
atagttgatattgaaaaagaagtaaccaaagacacggtatttgataagttgtttg

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  Functional Coupling


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