Protein Page for fig|387910.2.peg.23

SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov

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Protein fig|387910.2.peg.23: Siphoviridae Staphylococcus aureus phage phiNM4

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NCBI Taxonomy Id: 387910

Current Assignment: Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4)

Translate Function Assignments

Context on contig DQ530362 from base 6573 to 16980 (10408 bp)


Fid	Start	End	Size (nt)		Gap	SS	Function	Aliases
15	6573	7361	789	+			Phage phi 11 orf12 protein homolog	protein_id\|ABF73240.1, gi\|104641932
16	7390	7941	552	+	28	1: 1	Phage ssDNA binding protein	protein_id\|ABF73241.1, gi\|104641933
17	7954	8625	672	+	12		Phage phi 11 orf14 protein homolog	protein_id\|ABF73242.1, gi\|104641934
18	9588	8731	858	-	105		Phage protein	protein_id\|ABF73243.1, gi\|104641935
19	9653	10423	771	+	64	1: 1	Phage DNA replication protein O	protein_id\|ABF73244.1, gi\|104641936
20	10433	11212	780	+	9		Phage DNA helicase loader	protein_id\|ABF73245.1, gi\|104641937
21	11206	11364	159	+	-7		Phage protein	protein_id\|ABF73246.1, gi\|104641938
22	11377	11598	222	+	12		Phage phi 11 orf17 protein homolog	protein_id\|ABF73247.1, gi\|104641939
23	11608	12015	408	+	9		Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4)	protein_id\|ABF73248.1, gi\|104641940
24	12015	12200	186	+	-1		Phage phi 11 orf19 protein homolog	protein_id\|ABF73249.1, gi\|104641941
25	12201	12560	360	+	0		Phage phi 11 orf21 protein homolog	protein_id\|ABF73250.1, gi\|104641942
26	12560	12814	255	+	-1		Phage protein	protein_id\|ABF73251.1, gi\|104641943
27	12820	13062	243	+	5		Phage phi 11 orf22 protein homolog	protein_id\|ABF73252.1, gi\|104641944
28	13077	13478	402	+	14		Phage protein	protein_id\|ABF73253.1, gi\|104641945
29	13475	13669	195	+	-4		Phage protein	protein_id\|ABF73254.1, gi\|104641946
30	13666	14115	450	+	-4		Phage protein	protein_id\|ABF73255.1, gi\|104641947
31	14112	14396	285	+	-4		Phage protein	protein_id\|ABF73256.1, gi\|104641948
32	14389	14637	249	+	-8		Phage phi 11 orf23 protein homolog	protein_id\|ABF73257.1, gi\|104641949
33	14630	15166	537	+	-8	1: 2	Phage dimeric dUTPase (EC 3.6.1.23)	protein_id\|ABF73258.1, gi\|104641950
34	15203	15409	207	+	36		Phage phi 11 orf26a protein homolog	protein_id\|ABF73259.1, gi\|104641951
35	15406	15600	195	+	-4		Hypothetical protein, SAV0878 homolog [SA bacteriophages 11, Mu50B]	protein_id\|ABF73260.1, gi\|104641952
36	15597	15800	204	+	-4		Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B]	protein_id\|ABF73261.1, gi\|104641953
37	15793	16029	237	+	-8		Phage protein	protein_id\|ABF73262.1, gi\|104641954
38	16022	16408	387	+	-8		Hypothetical protein, SAV0881 homolog [SA bacteriophages 11, Mu50B]	protein_id\|ABF73263.1, gi\|104641955
39	16405	16578	174	+	-4		Phage integrase regulator RinB	protein_id\|ABF73264.1, gene_name\|rinB, gi\|104641956
40	16579	16980	402	+	0		Phage integrase regulator RinA	protein_id\|ABF73265.1, gi\|104641957

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Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|387910.2.peg.23 Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4)
MEIEIKFNETFEAPMGSPRPRFRNTGRFVQTYMPTAYTNHKAYIQGQMPKLNLERALKIE
LDFYFPLLKSWSKKKKSEMVGQYKVTKPDIDNLIKTVLDACNGHVWKDDNQITEITSSKR
YGLEPKIIMRVEEVI

MD5 = 62ef52b952afa4e0cad552bcc91dc3a7

DNA Sequence

>fig|387910.2.peg.23 Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4)
atggaaatagaaattaaatttaacgaaacgttcgaggcacctatgggctcgcctcgtcca
cgctttcgtaatacaggtagatttgttcaaacatacatgccaacagcttatacaaatcat
aaagcgtatatacaagggcaaatgcctaagttaaatctagagcgcgcactaaaaatcgaa
ttagacttttactttccattacttaaatcatggtcgaagaaaaagaaaagtgaaatggtt
ggacagtataaagtgactaagccggatatcgataacttaattaaaacagtattagacgca
tgtaatggtcatgtgtggaaagacgataaccaaattacagaaataactagctcaaagcgt
tatggactagaaccaaaaataatcatgcgagttgaggaagtgatctaa

DNA with Flanking Sequence

>fig|387910.2.peg.23 Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4)
ctaaatcaaaatatgaactggcaacgtatcaattcaagaatgaaacacaatgcgagaaaa
gtaagagtaatcggagacgatttcagggagcgagatgcatggtaaccaaagaatttttaa
aaactaaacttgagtgttcagatatgtacgctcagaaactcatagatgaggcacagggcg
atgaaaataggttgtacgacctatttatccaaaaacttgcagaacgtcatacacgccccg
ctatcgtcgaatattaaggagtgttaaaaatgccgaaagaaaaatattacttataccgag
aagatggcacggaagatattaaggtcatcaagtataaagacaacgtaaatgaagtttatt
cgctcacaggagcccatttcagcgacgaaaagaaaatcatggctgatagtgacctaaaac
gattcaaaggcgctcacgggcttttatatgagcaagagctagggttacaagcaacgatat
ttgatatttagaggtggcacatggaaatagaaattaaatttaacgaaacgttcgaggcac
ctatgggctcgcctcgtccacgctttcgtaatacaggtagatttgttcaaacatacatgc
caacagcttatacaaatcataaagcgtatatacaagggcaaatgcctaagttaaatctag
agcgcgcactaaaaatcgaattagacttttactttccattacttaaatcatggtcgaaga
aaaagaaaagtgaaatggttggacagtataaagtgactaagccggatatcgataacttaa
ttaaaacagtattagacgcatgtaatggtcatgtgtggaaagacgataaccaaattacag
aaataactagctcaaagcgttatggactagaaccaaaaataatcatgcgagttgaggaag
tgatctaatgcaacagcaagcatatataaacgcaacgattgatataaggatacctacaga
agttgaatatcagtattttgatgatgtggatatcgaaaaagaagcgctggcagattactt
atataacaatccagacgaattactagagtatgacaatttaaaaattagaaatgtaaatgt
agaggtggaataaatgagtgtcgtgaagattaacggtaaaccatataaatttaccgaaca
tgaaaatgaattgataaaaaagaacgggttaactcctggaatggttgcaaaaagagtacg
tggtggctgggcgttgttagaagccttaaacgcaccttatggcatgcgcttagctgagta
taaagaaatcgtattatccagaattatgcaacgagagagcaaagaacgtgaaatagctag
gcaacgacgtaaagaggttgaactacgtaagaggaaaccacatttgtttaatgtaccaca
aaaacattcacgtgatccgtactggttc

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