The SEED: an Annotation/Analysis Tool Provided by FIG
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Fid | Start | End | Size (nt) |
Gap | Find best clusters |
Pins | Fc-sc | SS | Ev | Function | Aliases | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
14 | 6359 | 6580 | 222 | + | ![]() |
Phage phi-ETA orf16 protein homolog | protein_id|ABF73239.1, gi|104641931 | |||||
15 | 6573 | 7361 | 789 | + | -8 | ![]() |
Phage phi 11 orf12 protein homolog | protein_id|ABF73240.1, gi|104641932 | ||||
16 | 7390 | 7941 | 552 | + | 28 | ![]() |
1: 1 | Phage ssDNA binding protein | protein_id|ABF73241.1, gi|104641933 | |||
17 | 7954 | 8625 | 672 | + | 12 | ![]() |
Phage phi 11 orf14 protein homolog | protein_id|ABF73242.1, gi|104641934 | ||||
18 | 9588 | 8731 | 858 | - | 105 | ![]() |
Phage protein | protein_id|ABF73243.1, gi|104641935 | ||||
19 | 9653 | 10423 | 771 | + | 64 | ![]() |
1: 1 | Phage DNA replication protein O | protein_id|ABF73244.1, gi|104641936 | |||
20 | 10433 | 11212 | 780 | + | 9 | ![]() |
Phage DNA helicase loader | protein_id|ABF73245.1, gi|104641937 | ||||
21 | 11206 | 11364 | 159 | + | -7 | ![]() |
Phage protein | protein_id|ABF73246.1, gi|104641938 | ||||
22 | 11377 | 11598 | 222 | + | 12 | ![]() |
Phage phi 11 orf17 protein homolog | protein_id|ABF73247.1, gi|104641939 | ||||
23 | 11608 | 12015 | 408 | + | 9 | ![]() |
Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4) | protein_id|ABF73248.1, gi|104641940 | ||||
24 | 12015 | 12200 | 186 | + | -1 | ![]() |
Phage phi 11 orf19 protein homolog | protein_id|ABF73249.1, gi|104641941 | ||||
25 | 12201 | 12560 | 360 | + | 0 | ![]() |
Phage phi 11 orf21 protein homolog | protein_id|ABF73250.1, gi|104641942 | ||||
26 | 12560 | 12814 | 255 | + | -1 | ![]() |
Phage protein | protein_id|ABF73251.1, gi|104641943 | ||||
27 | 12820 | 13062 | 243 | + | 5 | ![]() |
Phage phi 11 orf22 protein homolog | protein_id|ABF73252.1, gi|104641944 | ||||
28 | 13077 | 13478 | 402 | + | 14 | ![]() |
Phage protein | protein_id|ABF73253.1, gi|104641945 | ||||
29 | 13475 | 13669 | 195 | + | -4 | ![]() |
Phage protein | protein_id|ABF73254.1, gi|104641946 | ||||
30 | 13666 | 14115 | 450 | + | -4 | ![]() |
Phage protein | protein_id|ABF73255.1, gi|104641947 | ||||
31 | 14112 | 14396 | 285 | + | -4 | ![]() |
Phage protein | protein_id|ABF73256.1, gi|104641948 | ||||
32 | 14389 | 14637 | 249 | + | -8 | ![]() |
Phage phi 11 orf23 protein homolog | protein_id|ABF73257.1, gi|104641949 | ||||
33 | 14630 | 15166 | 537 | + | -8 | ![]() |
1: 2 | Phage dimeric dUTPase (EC 3.6.1.23) | protein_id|ABF73258.1, gi|104641950 | |||
34 | 15203 | 15409 | 207 | + | 36 | ![]() |
Phage phi 11 orf26a protein homolog | protein_id|ABF73259.1, gi|104641951 | ||||
35 | 15406 | 15600 | 195 | + | -4 | ![]() |
Hypothetical protein, SAV0878 homolog [SA bacteriophages 11, Mu50B] | protein_id|ABF73260.1, gi|104641952 | ||||
36 | 15597 | 15800 | 204 | + | -4 | ![]() |
Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B] | protein_id|ABF73261.1, gi|104641953 | ||||
37 | 15793 | 16029 | 237 | + | -8 | ![]() |
Phage protein | protein_id|ABF73262.1, gi|104641954 | ||||
38 | 16022 | 16408 | 387 | + | -8 | ![]() |
Hypothetical protein, SAV0881 homolog [SA bacteriophages 11, Mu50B] | protein_id|ABF73263.1, gi|104641955 | ||||
39 | 16405 | 16578 | 174 | + | -4 | ![]() |
Phage integrase regulator RinB | protein_id|ABF73264.1, gene_name|rinB, gi|104641956 | ||||
40 | 16579 | 16980 | 402 | + | 0 | ![]() |
Phage integrase regulator RinA | protein_id|ABF73265.1, gi|104641957 |
Annotation History / View All Related Annotations | Help on Annotations |
Id | Organism | Who | ASSIGN | Assignment |
---|---|---|---|---|
fig|320835.3.peg.2 | Bacteriophage 53 | FIG | Phage phi 11 orf17 protein homolog | |
fig|320843.3.peg.16 | Bacteriophage ROSA | FIG | Phage phi 11 orf17 protein homolog | |
fig|320844.3.peg.58 | Bacteriophage 71 | FIG | Phage phi 11 orf17 protein homolog | |
fig|387905.2.peg.20 | Siphoviridae Staphylococcus phage phiNM | FIG | Phage phi 11 orf17 protein homolog | |
fig|387908.2.peg.22 | Siphoviridae Staphylococcus aureus phage phiNM2 | FIG | Phage phi 11 orf17 protein homolog | |
fig|426430.8.peg.1094 | Staphylococcus aureus subsp. aureus str. Newman | FIG | Phage phi 11 orf17 protein homolog | |
fig|426430.8.peg.1953 | Staphylococcus aureus subsp. aureus str. Newman | FIG | Phage phi 11 orf17 protein homolog | |
fig|426430.8.peg.300 | Staphylococcus aureus subsp. aureus str. Newman | FIG | Phage phi 11 orf17 protein homolog | |
fig|59506.3.peg.66 | Bacteriophage 85 | FIG | Phage phi 11 orf17 protein homolog | |
gb|AAX90883.1 | Bacteriophage 53 | ORF066 | ||
gb|AAX90965.1 | Bacteriophage 85 | ORF069 | ||
gb|AAX91551.1 | Bacteriophage ROSA | ORF068 | ||
gb|AAX91626.1 | Bacteriophage 71 | ORF069 | ||
gb|ABF73050.1 | Staphylococcus aureus phage phiNM1 | hypothetical protein | ||
gb|ABF73116.1 | Staphylococcus aureus phage phiNM2 | hypothetical protein | ||
gb|ABF73247.1 | Staphylococcus aureus phage phiNM4 | hypothetical protein | ||
gi|104641636 | Staphylococcus aureus phage phiNM1 | NCBI | hypothetical protein | |
gi|104641738 | Staphylococcus aureus phage phiNM2 | NCBI | hypothetical protein | |
gi|104641939 | Staphylococcus aureus phage phiNM4 | NCBI | hypothetical protein | |
gi|118430744 | Staphylococcus phage phiNM | NCBI | hypothetical protein SAPPV1_gp20 | |
gi|62635772 | Bacteriophage 53 | NCBI | ORF066 | |
gi|62635854 | Bacteriophage 85 | NCBI | ORF069 | |
gi|62636440 | Bacteriophage ROSA | NCBI | ORF068 | |
gi|62636515 | Bacteriophage 71 | NCBI | ORF069 | |
gi|66394925 | Staphylococcus phage 85 | NCBI | ORF069 | |
gi|66395422 | Staphylococcus phage 53 | NCBI | ORF066 | |
gi|66396020 | Staphylococcus phage ROSA | NCBI | ORF068 | |
gi|66396096 | Staphylococcus phage 71 | NCBI | ORF069 | |
img|638314121 | Bacteriophage 53 | IMG | ORF066 | |
img|638314204 | Bacteriophage 85 | IMG | ORF069 | |
img|638314781 | Bacteriophage ROSA | IMG | ORF068 | |
img|638314856 | Bacteriophage 71 | IMG | ORF069 | |
img|641203575 | Staphylococcus aureus phage phiNM provirus | IMG | hypothetical protein | |
ref|YP_239702.1 | Staphylococcus phage 53 | RefSeq | ORF066 | |
ref|YP_239785.1 | Staphylococcus phage 85 | RefSeq | ORF069 | |
ref|YP_240362.1 | Staphylococcus phage ROSA | RefSeq | ORF068 | |
ref|YP_240437.1 | Staphylococcus phage 71 | RefSeq | ORF069 | |
ref|YP_873969.1 | Staphylococcus phage phiNM | RefSeq | hypothetical protein SAPPV1_gp20 | |
tr|A0EWJ1 | Staphylococcus aureus phage phiNM1 | TrEMBL | Putative uncharacterized protein | |
tr|A0EWQ7 | Staphylococcus aureus phage phiNM2 | TrEMBL | Putative uncharacterized protein | |
tr|A0EX38 | Staphylococcus aureus phage phiNM4 | TrEMBL | Putative uncharacterized protein | |
tr|Q4ZBD9 | Staphylococcus phage 71 | TrEMBL | ORF069 | |
tr|Q4ZBL4 | Staphylococcus phage ROSA | TrEMBL | ORF068 | |
tr|Q4ZD91 | Staphylococcus phage 85 | TrEMBL | ORF069 | |
tr|Q4ZDH4 | Staphylococcus phage 53 | TrEMBL | ORF066 |
Score | Peg | Function |
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Key Link Explains Key |
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