The SEED: an Annotation/Analysis Tool Provided by FIG
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Fid | Start | End | Size (nt) |
Gap | Find best clusters |
Pins | Fc-sc | SS | Ev | Function | Aliases | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
13 | 6089 | 6349 | 261 | + | ![]() |
Phage phi 11 orf11 protein homolog | protein_id|ABF73238.1, gi|104641930 | |||||
14 | 6359 | 6580 | 222 | + | 9 | ![]() |
Phage phi-ETA orf16 protein homolog | protein_id|ABF73239.1, gi|104641931 | ||||
15 | 6573 | 7361 | 789 | + | -8 | ![]() |
Phage phi 11 orf12 protein homolog | protein_id|ABF73240.1, gi|104641932 | ||||
16 | 7390 | 7941 | 552 | + | 28 | ![]() |
1: 1 | Phage ssDNA binding protein | protein_id|ABF73241.1, gi|104641933 | |||
17 | 7954 | 8625 | 672 | + | 12 | ![]() |
Phage phi 11 orf14 protein homolog | protein_id|ABF73242.1, gi|104641934 | ||||
18 | 9588 | 8731 | 858 | - | 105 | ![]() |
Phage protein | protein_id|ABF73243.1, gi|104641935 | ||||
19 | 9653 | 10423 | 771 | + | 64 | ![]() |
1: 1 | Phage DNA replication protein O | protein_id|ABF73244.1, gi|104641936 | |||
20 | 10433 | 11212 | 780 | + | 9 | ![]() |
Phage DNA helicase loader | protein_id|ABF73245.1, gi|104641937 | ||||
21 | 11206 | 11364 | 159 | + | -7 | ![]() |
Phage protein | protein_id|ABF73246.1, gi|104641938 | ||||
22 | 11377 | 11598 | 222 | + | 12 | ![]() |
Phage phi 11 orf17 protein homolog | protein_id|ABF73247.1, gi|104641939 | ||||
23 | 11608 | 12015 | 408 | + | 9 | ![]() |
Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4) | protein_id|ABF73248.1, gi|104641940 | ||||
24 | 12015 | 12200 | 186 | + | -1 | ![]() |
Phage phi 11 orf19 protein homolog | protein_id|ABF73249.1, gi|104641941 | ||||
25 | 12201 | 12560 | 360 | + | 0 | ![]() |
Phage phi 11 orf21 protein homolog | protein_id|ABF73250.1, gi|104641942 | ||||
26 | 12560 | 12814 | 255 | + | -1 | ![]() |
Phage protein | protein_id|ABF73251.1, gi|104641943 | ||||
27 | 12820 | 13062 | 243 | + | 5 | ![]() |
Phage phi 11 orf22 protein homolog | protein_id|ABF73252.1, gi|104641944 | ||||
28 | 13077 | 13478 | 402 | + | 14 | ![]() |
Phage protein | protein_id|ABF73253.1, gi|104641945 | ||||
29 | 13475 | 13669 | 195 | + | -4 | ![]() |
Phage protein | protein_id|ABF73254.1, gi|104641946 | ||||
30 | 13666 | 14115 | 450 | + | -4 | ![]() |
Phage protein | protein_id|ABF73255.1, gi|104641947 | ||||
31 | 14112 | 14396 | 285 | + | -4 | ![]() |
Phage protein | protein_id|ABF73256.1, gi|104641948 | ||||
32 | 14389 | 14637 | 249 | + | -8 | ![]() |
Phage phi 11 orf23 protein homolog | protein_id|ABF73257.1, gi|104641949 | ||||
33 | 14630 | 15166 | 537 | + | -8 | ![]() |
1: 2 | Phage dimeric dUTPase (EC 3.6.1.23) | protein_id|ABF73258.1, gi|104641950 | |||
34 | 15203 | 15409 | 207 | + | 36 | ![]() |
Phage phi 11 orf26a protein homolog | protein_id|ABF73259.1, gi|104641951 | ||||
35 | 15406 | 15600 | 195 | + | -4 | ![]() |
Hypothetical protein, SAV0878 homolog [SA bacteriophages 11, Mu50B] | protein_id|ABF73260.1, gi|104641952 | ||||
36 | 15597 | 15800 | 204 | + | -4 | ![]() |
Hypothetical protein, SAV0879 homolog [SA bacteriophages 11, Mu50B] | protein_id|ABF73261.1, gi|104641953 | ||||
37 | 15793 | 16029 | 237 | + | -8 | ![]() |
Phage protein | protein_id|ABF73262.1, gi|104641954 | ||||
38 | 16022 | 16408 | 387 | + | -8 | ![]() |
Hypothetical protein, SAV0881 homolog [SA bacteriophages 11, Mu50B] | protein_id|ABF73263.1, gi|104641955 |
Annotation History / View All Related Annotations | Help on Annotations |
Id | Organism | Who | ASSIGN | Assignment |
---|---|---|---|---|
fig|259901.1.peg.45 | Bacteriophage 77 | FIG | Phage protein | |
fig|320833.3.peg.59 | Bacteriophage 187 | FIG | Phage protein | |
fig|320835.3.peg.1 | Bacteriophage 53 | FIG | Phage protein | |
fig|320843.3.peg.15 | Bacteriophage ROSA | FIG | Phage protein | |
fig|387908.2.peg.21 | Siphoviridae Staphylococcus aureus phage phiNM2 | FIG | Phage protein | |
fig|55511.2.peg.59 | Siphoviridae Staphylococcus phage 187 | FIG | Phage protein | |
fig|59506.3.peg.65 | Bacteriophage 85 | FIG | Phage protein | |
gb|AAR87935.1 | Bacteriophage 77 | 77ORF104 | ||
gb|AAX90749.1 | Bacteriophage 187 | ORF108 | ||
gb|AAX90899.1 | Bacteriophage 53 | ORF108 | ||
gb|AAX90980.1 | Bacteriophage 85 | ORF108 | ||
gb|AAX91563.1 | Bacteriophage ROSA | ORF117 | ||
gb|ABF73115.1 | Staphylococcus aureus phage phiNM2 | hypothetical protein | ||
gb|ABF73246.1 | Staphylococcus aureus phage phiNM4 | hypothetical protein | ||
gi|104641737 | Staphylococcus aureus phage phiNM2 | NCBI | hypothetical protein | |
gi|104641938 | Staphylococcus aureus phage phiNM4 | NCBI | hypothetical protein | |
gi|40557279 | Bacteriophage 77 | NCBI | 77ORF104 | |
gi|41189578 | Staphylococcus phage 77 | NCBI | 77ORF104 | |
gi|62635638 | Bacteriophage 187 | NCBI | ORF108 | |
gi|62635788 | Bacteriophage 53 | NCBI | ORF108 | |
gi|62635869 | Bacteriophage 85 | NCBI | ORF108 | |
gi|62636452 | Bacteriophage ROSA | NCBI | ORF117 | |
gi|66394940 | Staphylococcus phage 85 | NCBI | ORF108 | |
gi|66395286 | Staphylococcus phage 187 | NCBI | ORF108 | |
gi|66395438 | Staphylococcus phage 53 | NCBI | ORF108 | |
gi|66396032 | Staphylococcus phage ROSA | NCBI | ORF117 | |
img|638305523 | Bacteriophage 77 | IMG | 77ORF104 | |
img|638313965 | Bacteriophage 187 | IMG | ORF108 | |
img|638314120 | Bacteriophage 53 | IMG | ORF108 | |
img|638314203 | Bacteriophage 85 | IMG | ORF108 | |
img|638314780 | Bacteriophage ROSA | IMG | ORF117 | |
ref|NP_958646.1 | Staphylococcus phage 77 | RefSeq | 77ORF104 | |
ref|YP_239546.1 | Staphylococcus phage 187 | RefSeq | ORF108 | |
ref|YP_239701.1 | Staphylococcus phage 53 | RefSeq | ORF108 | |
ref|YP_239784.1 | Staphylococcus phage 85 | RefSeq | ORF108 | |
ref|YP_240361.1 | Staphylococcus phage ROSA | RefSeq | ORF117 | |
tr|A0EWQ6 | Staphylococcus aureus phage phiNM2 | TrEMBL | Putative uncharacterized protein | |
tr|A0EX37 | Staphylococcus aureus phage phiNM4 | TrEMBL | Putative uncharacterized protein | |
tr|Q4ZBL5 | Staphylococcus phage ROSA | TrEMBL | ORF117 | |
tr|Q4ZD92 | Staphylococcus phage 85 | TrEMBL | ORF108 | |
tr|Q4ZDH5 | Staphylococcus phage 53 | TrEMBL | ORF108 | |
tr|Q4ZDY0 | Staphylococcus phage 187 | TrEMBL | ORF108 | |
tr|Q6R837 | Staphylococcus phage 77 | TrEMBL | 77ORF104 |
Score | Peg | Function |
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Key Link Explains Key |
Value |
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