Protein Page for fig|387910.2.peg.19

SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov

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Protein fig|387910.2.peg.19: Siphoviridae Staphylococcus aureus phage phiNM4

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NCBI Taxonomy Id: 387910

Current Assignment: Phage DNA replication protein O

Translate Function Assignments

Context on contig DQ530362 from base 4548 to 15600 (11053 bp)


Fid	Start	End	Size (nt)		Gap	SS	Function	Aliases
9	4548	5297	750	+			Phage antirepressor protein	protein_id\|ABF73234.1, gi\|104641926
10	5313	5531	219	+	15		Phage phi 11 orf9 protein homolog	protein_id\|ABF73235.1, gi\|104641927
11	5561	5824	264	+	29		Phage protein	protein_id\|ABF73236.1, gi\|104641928
12	5836	5997	162	+	11		Phage phi 11 orf10a protein homolog	protein_id\|ABF73237.1, gi\|104641929
13	6089	6349	261	+	91		Phage phi 11 orf11 protein homolog	protein_id\|ABF73238.1, gi\|104641930
14	6359	6580	222	+	9		Phage phi-ETA orf16 protein homolog	protein_id\|ABF73239.1, gi\|104641931
15	6573	7361	789	+	-8		Phage phi 11 orf12 protein homolog	protein_id\|ABF73240.1, gi\|104641932
16	7390	7941	552	+	28	1: 1	Phage ssDNA binding protein	protein_id\|ABF73241.1, gi\|104641933
17	7954	8625	672	+	12		Phage phi 11 orf14 protein homolog	protein_id\|ABF73242.1, gi\|104641934
18	9588	8731	858	-	105		Phage protein	protein_id\|ABF73243.1, gi\|104641935
19	9653	10423	771	+	64	1: 1	Phage DNA replication protein O	protein_id\|ABF73244.1, gi\|104641936
20	10433	11212	780	+	9		Phage DNA helicase loader	protein_id\|ABF73245.1, gi\|104641937
21	11206	11364	159	+	-7		Phage protein	protein_id\|ABF73246.1, gi\|104641938
22	11377	11598	222	+	12		Phage phi 11 orf17 protein homolog	protein_id\|ABF73247.1, gi\|104641939
23	11608	12015	408	+	9		Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4)	protein_id\|ABF73248.1, gi\|104641940
24	12015	12200	186	+	-1		Phage phi 11 orf19 protein homolog	protein_id\|ABF73249.1, gi\|104641941
25	12201	12560	360	+	0		Phage phi 11 orf21 protein homolog	protein_id\|ABF73250.1, gi\|104641942
26	12560	12814	255	+	-1		Phage protein	protein_id\|ABF73251.1, gi\|104641943
27	12820	13062	243	+	5		Phage phi 11 orf22 protein homolog	protein_id\|ABF73252.1, gi\|104641944
28	13077	13478	402	+	14		Phage protein	protein_id\|ABF73253.1, gi\|104641945
29	13475	13669	195	+	-4		Phage protein	protein_id\|ABF73254.1, gi\|104641946
30	13666	14115	450	+	-4		Phage protein	protein_id\|ABF73255.1, gi\|104641947
31	14112	14396	285	+	-4		Phage protein	protein_id\|ABF73256.1, gi\|104641948
32	14389	14637	249	+	-8		Phage phi 11 orf23 protein homolog	protein_id\|ABF73257.1, gi\|104641949
33	14630	15166	537	+	-8	1: 2	Phage dimeric dUTPase (EC 3.6.1.23)	protein_id\|ABF73258.1, gi\|104641950
34	15203	15409	207	+	36		Phage phi 11 orf26a protein homolog	protein_id\|ABF73259.1, gi\|104641951
35	15406	15600	195	+	-4		Hypothetical protein, SAV0878 homolog [SA bacteriophages 11, Mu50B]	protein_id\|ABF73260.1, gi\|104641952

Annotation History / View All Related Annotations

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Subsystems in Which This Protein Plays a Role


Subsystem	Curator	Role
Phage_replication	RamyA	Phage replication initiation protein

Protein Sequence

>fig|387910.2.peg.19 Phage DNA replication protein O
MATFRTIKESGDFVTVHKSFVFDSNLSAKAKGILLYFLSRPDNWQIYTSEVVKHMNDGQK
SINSGVQELMDNKYVHRIQKRAENGVFKGFEYLVYEKPTEMPFSENGLSANGFSENGKTE
NRKGRTTNNNSTNNDLTNNNNTNNDGSILSGNPTVYSIPYKEIIEYLNKKAGKHFKHNTA
KTKDFIKARWNQDFRLEDFKKVIDIKTAEWLNTDSDKYLRPETLFGSKFEGYLNQKIQPT
GTDQLERMKYDESYWD

MD5 = 1245687627bd7c748da0cc36551db4c8

DNA Sequence

>fig|387910.2.peg.19 Phage DNA replication protein O
atggcaacatttagaacgataaaagaaagtggcgattttgtaactgtgcataaatctttt
gtgttcgatagtaatttaagtgctaaagctaaagggatattattgtatttcctaagtcgt
cctgacaattggcaaatatacacgtcagaagtagttaaacatatgaatgatggacaaaaa
tcaatcaatagtggcgttcaagaacttatggataataaatatgttcacagaatacaaaaa
agagctgaaaacggtgtgtttaaaggttttgaatacttagtttacgaaaaaccaaccgaa
atgccattttcggaaaacggattatcggcaaacgggttttcggaaaacggaaaaacggaa
aaccgaaaagggcgtactactaataataatagtactaataatgatttaactaataataac
aatactaataatgatggaagtatattgtcgggcaacccgactgtgtattccattccctat
aaagaaattatcgaatacttaaataaaaaagcaggaaagcattttaaacataatacagct
aaaacaaaagattttattaaagcaagatggaatcaagattttaggttggaggattttaaa
aaggtgattgatatcaaaacagctgaatggttaaacacggatagcgataaataccttaga
ccagaaacactttttggcagtaaatttgaggggtacctcaatcaaaaaatacaaccaact
ggcacggatcaattggaacgcatgaagtacgacgaaagttattgggattag

DNA with Flanking Sequence

>fig|387910.2.peg.19 Phage DNA replication protein O
atttaacggcaggatgtacttcgtgattctttaaatgttttaaaagaatagcatcatttg
gggataattgtttaattatttcaacaaatgaatggtgggttaatgagttttttctgtcat
ccatagatgatgctattagttttgcgaacatattacttaaagttttttcactaatgtaaa
actttgaagcttctagagcaggacctagaagagaaaattgtggttcttgtaaattatttt
caggtacagaagatatttcttttttaaattgttctttgaatttttcaaattctacttctc
tttgataaataactttatccacataaaggtggaatttcccaaagacaagttcccaagttt
tagagaatgtttctacaggcccttttgatgcgccttcaataattttatcaatacctttac
ctaaaataggatccataattattcacccccaatctaacgcaatagcgataataaaattat
accagaaaggagataacgaaatggcaacatttagaacgataaaagaaagtggcgattttg
taactgtgcataaatcttttgtgttcgatagtaatttaagtgctaaagctaaagggatat
tattgtatttcctaagtcgtcctgacaattggcaaatatacacgtcagaagtagttaaac
atatgaatgatggacaaaaatcaatcaatagtggcgttcaagaacttatggataataaat
atgttcacagaatacaaaaaagagctgaaaacggtgtgtttaaaggttttgaatacttag
tttacgaaaaaccaaccgaaatgccattttcggaaaacggattatcggcaaacgggtttt
cggaaaacggaaaaacggaaaaccgaaaagggcgtactactaataataatagtactaata
atgatttaactaataataacaatactaataatgatggaagtatattgtcgggcaacccga
ctgtgtattccattccctataaagaaattatcgaatacttaaataaaaaagcaggaaagc
attttaaacataatacagctaaaacaaaagattttattaaagcaagatggaatcaagatt
ttaggttggaggattttaaaaaggtgattgatatcaaaacagctgaatggttaaacacgg
atagcgataaataccttagaccagaaacactttttggcagtaaatttgaggggtacctca
atcaaaaaatacaaccaactggcacggatcaattggaacgcatgaagtacgacgaaagtt
attgggattagggggatattatgaaaccactattcagcgaaaagataaacgaaagcttga
aaaaatatcaacctactcatgtcgaaaaaggattgaaatgtgagagatgtggaagtgaat
acgacttatataagtttgctcctactaaaaaacacccgaatggttacgagtataaagacg
gttgcaaatgtgaaatctatgaggaatataagcgaaacaagcaacggaagataaacaaca
tattcaatcaatcaaacgttaatccgtctttaagagatgcaacagtcaaaaactacaagc
cacaaaatgaaaaacaagtacacgctaaacaaacagcaatagagtacgtacaaggcttct
ctacaaaagaaccaaaatcattaatattgcaaggttcatacggaactggtaaaagccacc
tagcatacgctatcgcaaaagcagtcaaagctaaagggcatacggttgcttttatgcaca
taccaatgttgatggatcgtatcaaagcgac

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  Functional Coupling


Score	Peg	Function

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