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SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov
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Protein fig|387910.2.peg.15: Siphoviridae Staphylococcus aureus phage phiNM4

This feature in The SEED Viewer

NCBI Taxonomy Id: 387910

Current Assignment: Phage phi 11 orf12 protein homolog
Translate Function Assignments


Context on contig DQ530362 from base 1410 to 12560 (11151 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2 1410 1589 180 +           Phage excisionase protein_id|ABF73227.1, gi|104641919
3 2501 1569 933 - -21         Hypothetical protein, SAV0849 homolog [SA bacteriophages 11, Mu50B] protein_id|ABF73228.1, gi|104641920
4 2997 2533 465 - 31         Phage protein protein_id|ABF73229.1, gi|104641921
5 3324 3010 315 - 12         Phage repressor protein cI protein_id|ABF73230.1, gi|104641922
6 3476 3712 237 + 151         Phage transcriptional regulator cro protein_id|ABF73231.1, gi|104641923
7 3726 3905 180 + 13         Phage protein protein_id|ABF73232.1, gi|104641924
8 4488 4006 483 - 100         ORF029 protein_id|ABF73233.1, gi|104641925
9 4548 5297 750 + 59         Phage antirepressor protein protein_id|ABF73234.1, gi|104641926
10 5313 5531 219 + 15         Phage phi 11 orf9 protein homolog protein_id|ABF73235.1, gi|104641927
11 5561 5824 264 + 29         Phage protein protein_id|ABF73236.1, gi|104641928
12 5836 5997 162 + 11         Phage phi 11 orf10a protein homolog protein_id|ABF73237.1, gi|104641929
13 6089 6349 261 + 91         Phage phi 11 orf11 protein homolog protein_id|ABF73238.1, gi|104641930
14 6359 6580 222 + 9         Phage phi-ETA orf16 protein homolog protein_id|ABF73239.1, gi|104641931
15 6573 7361 789 + -8         Phage phi 11 orf12 protein homolog protein_id|ABF73240.1, gi|104641932
16 7390 7941 552 + 28     1: 1   Phage ssDNA binding protein protein_id|ABF73241.1, gi|104641933
17 7954 8625 672 + 12         Phage phi 11 orf14 protein homolog protein_id|ABF73242.1, gi|104641934
18 9588 8731 858 - 105         Phage protein protein_id|ABF73243.1, gi|104641935
19 9653 10423 771 + 64     1: 1   Phage DNA replication protein O protein_id|ABF73244.1, gi|104641936
20 10433 11212 780 + 9         Phage DNA helicase loader protein_id|ABF73245.1, gi|104641937
21 11206 11364 159 + -7         Phage protein protein_id|ABF73246.1, gi|104641938
22 11377 11598 222 + 12         Phage phi 11 orf17 protein homolog protein_id|ABF73247.1, gi|104641939
23 11608 12015 408 + 9         Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4) protein_id|ABF73248.1, gi|104641940
24 12015 12200 186 + -1         Phage phi 11 orf19 protein homolog protein_id|ABF73249.1, gi|104641941
25 12201 12560 360 + 0         Phage phi 11 orf21 protein homolog protein_id|ABF73250.1, gi|104641942

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|387910.2.peg.15 Phage phi 11 orf12 protein homolog
MTEEKQEPQEKVSILKKLKINNIAEKNKRKFYKFAVYGKIGSGKTTFATRDKDAFVIDIN
EGGTTVTDEGSDVEIENYQHFVYVVNFLPQILQEMRENGQEINVVVIETIQKLRDMTLND
VMKNKSKKPTFNDWGEVAERIVSMYRLIGKLQEEYKFHFVITGHEGINKDKDDEGSTINP
TITIEAQEQIKKAITSQSDVLARAMIEEFDDNGEKKARYILNAEPSNTFETKIRHSPSIT
INNKKFANPSITDVVEAIRNGN

MD5 = b3d978dd96f106748a4ddebd2182133d


  DNA Sequence

>fig|387910.2.peg.15 Phage phi 11 orf12 protein homolog
atgactgaggaaaaacaagaaccacaagaaaaagtaagcatactcaaaaaactaaagata
aataatatcgctgagaaaaataaaaggaaattctataaatttgcagtatacggaaaaatt
ggctcaggaaaaaccacgtttgctacaagagataaagacgctttcgtcattgacattaac
gaaggtggaacaacggttactgacgaaggatcagacgtagaaatcgagaactatcaacac
tttgtttatgttgtaaattttttacctcaaattttacaggagatgagagaaaacggacaa
gaaatcaatgttgtagttattgaaactattcaaaaacttagagatatgacattgaatgat
gtgatgaaaaataagtctaaaaaaccaacgtttaatgattggggagaagttgctgaacga
attgtcagtatgtacagattaataggaaaacttcaagaagaatacaaattccactttgtt
attacaggtcatgaaggtatcaacaaagataaagatgatgaaggtagcactatcaaccct
actatcactattgaagcgcaagaacaaattaaaaaagctattacttctcaaagtgatgtg
ttagctagggcaatgattgaagaatttgatgataacggagaaaagaaagctagatatatt
ctaaacgctgaaccttctaatacgtttgaaacaaagattagacattcaccttcaataaca
attaacaataagaaatttgcaaatcctagcattacggacgtagtagaagcaattagaaat
ggaaactaa


  DNA with Flanking Sequence

>fig|387910.2.peg.15 Phage phi 11 orf12 protein homolog
aacggaggaagtcaagatgtattacgaaataggcgaaatcatacgcaaaaatattcatgt
taacggattcgattttaagctattcattttaaaaggtcatatgggcatatcaatacaagt
taaagatatgaacaacgtaccaattaaacatgcttatgtcgtagatgagaatgacttaga
tatggcatcagacttatttaaccaagcaatagatgaatggattgaagagaacacagacga
acaggacagactaattaacttagtcatgaaatggtaggaggtcgctatgaagcagactgt
aacttatatcattcgtcatagggatatgccaatttatataactaacaaaccaactgataa
caattcagatattagttactccacaaatagaaatagagctagggagtttaacggtatgga
agaagcgagtatcaatatggattatcacaaagcaatcaagaaaacagtgacagaaactat
tgagtacgaggaggtagaacatgactgaggaaaaacaagaaccacaagaaaaagtaagca
tactcaaaaaactaaagataaataatatcgctgagaaaaataaaaggaaattctataaat
ttgcagtatacggaaaaattggctcaggaaaaaccacgtttgctacaagagataaagacg
ctttcgtcattgacattaacgaaggtggaacaacggttactgacgaaggatcagacgtag
aaatcgagaactatcaacactttgtttatgttgtaaattttttacctcaaattttacagg
agatgagagaaaacggacaagaaatcaatgttgtagttattgaaactattcaaaaactta
gagatatgacattgaatgatgtgatgaaaaataagtctaaaaaaccaacgtttaatgatt
ggggagaagttgctgaacgaattgtcagtatgtacagattaataggaaaacttcaagaag
aatacaaattccactttgttattacaggtcatgaaggtatcaacaaagataaagatgatg
aaggtagcactatcaaccctactatcactattgaagcgcaagaacaaattaaaaaagcta
ttacttctcaaagtgatgtgttagctagggcaatgattgaagaatttgatgataacggag
aaaagaaagctagatatattctaaacgctgaaccttctaatacgtttgaaacaaagatta
gacattcaccttcaataacaattaacaataagaaatttgcaaatcctagcattacggacg
tagtagaagcaattagaaatggaaactaaaaattaattaaaaggacggtatttaattatg
aaaatcacaggacaagcgcaatttactaaagaaacaaatcaagaaaagttttataacggc
tcagcagggtttcaagctggagaattcacagtgaaagttaaaaatattgaattcaatgat
agagaaaatagatatttcacaatcgtatttgaaaatgatgaaggcaaacaatataaacat
aatcaatttgtaccgccgtataaatatgatttccaagaaaaacaattgattgaattagtt
actcgattaggtattaagttaaatcttcctagcttagattttgataccaatgatcttatt
ggtaagttttgtcacttggtattgaaatggaaattcaatgaagatgaaggtaagtatttt
acggatttttcatttattaaaccttacaaaaagggcgatgatgttgttaacaaacctatt
ccgaagacagataagcaaaaagctgaagaaaataacggggcacaacaac


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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