Protein Page for fig|387910.2.peg.1

SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov

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Protein fig|387910.2.peg.1: Siphoviridae Staphylococcus aureus phage phiNM4

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NCBI Taxonomy Id: 387910

Current Assignment: Phage integrase

Translate Function Assignments

Context on contig DQ530362 from base 94 to 6349 (6256 bp)


Fid	Start	End	Size (nt)		Gap	SS	Function	Aliases
1	1299	94	1206	-		1: 1	Phage integrase	protein_id\|ABF73226.1, gene_name\|int, gi\|104641918
2	1410	1589	180	+	110		Phage excisionase	protein_id\|ABF73227.1, gi\|104641919
3	2501	1569	933	-	-21		Hypothetical protein, SAV0849 homolog [SA bacteriophages 11, Mu50B]	protein_id\|ABF73228.1, gi\|104641920
4	2997	2533	465	-	31		Phage protein	protein_id\|ABF73229.1, gi\|104641921
5	3324	3010	315	-	12		Phage repressor protein cI	protein_id\|ABF73230.1, gi\|104641922
6	3476	3712	237	+	151		Phage transcriptional regulator cro	protein_id\|ABF73231.1, gi\|104641923
7	3726	3905	180	+	13		Phage protein	protein_id\|ABF73232.1, gi\|104641924
8	4488	4006	483	-	100		ORF029	protein_id\|ABF73233.1, gi\|104641925
9	4548	5297	750	+	59		Phage antirepressor protein	protein_id\|ABF73234.1, gi\|104641926
10	5313	5531	219	+	15		Phage phi 11 orf9 protein homolog	protein_id\|ABF73235.1, gi\|104641927
11	5561	5824	264	+	29		Phage protein	protein_id\|ABF73236.1, gi\|104641928
12	5836	5997	162	+	11		Phage phi 11 orf10a protein homolog	protein_id\|ABF73237.1, gi\|104641929
13	6089	6349	261	+	91		Phage phi 11 orf11 protein homolog	protein_id\|ABF73238.1, gi\|104641930

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Subsystems in Which This Protein Plays a Role


Subsystem	Curator	Role
Phage_integrases	RamyA	Phage integrase

Protein Sequence

>fig|387910.2.peg.1 Phage integrase
MWFEKFKNKNNETKYRYYEKYKDPYTDKWKRVSVVLNKNTKQSQKEAMFRLEEKIKEKLN
NKSSSELKTLTFHALLDEWLEYHIKTSGFKVTTLDNLKTRIKNIKKNSSQNLLLNKIDTK
YMQTFINELSNVYSANQVKRQLGHMKEAIKYAVKFYNYPNEHILNSVTLPKKSKTIEDIE
KEEAKMYNYLEMEQVIQIRDFILNDNNMQYRARILVAGAVEVQALTGMRIGELLALQVKD
VDLKNKTIAINGTIHRIKCNAGFGHKDTTKTAGSKRKIAINSRIANVLKKIMLENKKMQQ
WEPSYVDRGFIFTTCQGNPMQGSRINKRLSSAAESLNINKKVTTHTLRHTHISLLAEMNI
SLKAIMKRVGHRDEKTTIKVYTHVTEKMDRELEQKLEKLVY

MD5 = cb9433e121fc29bace0efa24cea36767

DNA Sequence

>fig|387910.2.peg.1 Phage integrase
atgtggtttgaaaaatttaaaaataagaacaatgaaacgaagtatagatactacgagaaa
tacaaagatccgtatacagataaatggaaacgtgtaagtgttgtcttgaataagaataca
aagcaatcgcaaaaagaggcaatgtttcgtttagaagaaaaaataaaagaaaaactaaac
aacaagtcgtcaagcgaattaaaaactttgacttttcacgcgttattagatgaatggctt
gaatatcatataaaaacatctggctttaaagtaacgacgcttgataatttgaaaacaaga
atcaaaaacatcaaaaagaacagttctcaaaatttacttttaaacaaaattgatacaaag
tacatgcaaacatttattaacgaattatcaaacgtatattctgcaaatcaggtaaagcgt
caacttggacatatgaaagaagctattaaatacgccgttaaattttacaattatccaaac
gaacacatattaaatagcgtcacactaccaaagaagagtaagacgatagaagatatagaa
aaagaagaagcgaaaatgtacaactatttagagatggaacaggtaatacagatacgcgat
tttatactgaacgataataacatgcagtatagagctcgtattttagttgctggggctgta
gaagttcaagctttaacaggtatgcgcataggtgagttattagctctccaagttaaagat
gttgacctcaaaaataaaacgatcgctattaatggcactattcacagaatcaaatgtaat
gctggatttggtcacaaagatactacgaagaccgcaggttcaaaaagaaaaatcgccatc
aattcaaggatagcaaatgtattgaaaaaaataatgttagaaaataaaaagatgcaacaa
tgggaaccaagctatgttgatagagggtttatattcacaacttgccaaggaaatcctatg
caaggcagtaggataaacaaacgattgtcctcagctgcagaatcattaaatataaataaa
aaagttactactcacacactaaggcatacacacataagtttattggcggaaatgaatata
tcgttaaaagcaattatgaaaagagtaggacatagagatgaaaaaacgactataaaggtg
tatacacatgtaacagagaaaatggacagagagttagagcaaaaattagaaaaacttgtg
tactaa

DNA with Flanking Sequence

>fig|387910.2.peg.1 Phage integrase
actatgtacacaaaattattaggagaattaactaaagaaggtaaagtaaattatagaacc
aaaaaacgggtagaaattgcgtatagtatgagaaacataatcaaccattcacaagctggt
gcagtagccaaaggtgattgtgactttcttttaaacacactaaaagacattgttgatgaa
aacgaaaaaatattaagagaatataccaaatcaattaataagacggaataaataggtatc
cttgtattcagatttgatttttaacataatttgttcataaatttttaatttaagttcttg
ttcatcgtcataaatatcaaattcactactataattttcaactgattcttttatataagc
tatttctgcgtcagtaaattttacacacatttcatcacctactttttattttattatatc
acatttagtagctagtactaaaatcacgggtagcccgcctacccttattattttttgcca
attttgaggagggatgtaaaatgtggtttgaaaaatttaaaaataagaacaatgaaacga
agtatagatactacgagaaatacaaagatccgtatacagataaatggaaacgtgtaagtg
ttgtcttgaataagaatacaaagcaatcgcaaaaagaggcaatgtttcgtttagaagaaa
aaataaaagaaaaactaaacaacaagtcgtcaagcgaattaaaaactttgacttttcacg
cgttattagatgaatggcttgaatatcatataaaaacatctggctttaaagtaacgacgc
ttgataatttgaaaacaagaatcaaaaacatcaaaaagaacagttctcaaaatttacttt
taaacaaaattgatacaaagtacatgcaaacatttattaacgaattatcaaacgtatatt
ctgcaaatcaggtaaagcgtcaacttggacatatgaaagaagctattaaatacgccgtta
aattttacaattatccaaacgaacacatattaaatagcgtcacactaccaaagaagagta
agacgatagaagatatagaaaaagaagaagcgaaaatgtacaactatttagagatggaac
aggtaatacagatacgcgattttatactgaacgataataacatgcagtatagagctcgta
ttttagttgctggggctgtagaagttcaagctttaacaggtatgcgcataggtgagttat
tagctctccaagttaaagatgttgacctcaaaaataaaacgatcgctattaatggcacta
ttcacagaatcaaatgtaatgctggatttggtcacaaagatactacgaagaccgcaggtt
caaaaagaaaaatcgccatcaattcaaggatagcaaatgtattgaaaaaaataatgttag
aaaataaaaagatgcaacaatgggaaccaagctatgttgatagagggtttatattcacaa
cttgccaaggaaatcctatgcaaggcagtaggataaacaaacgattgtcctcagctgcag
aatcattaaatataaataaaaaagttactactcacacactaaggcatacacacataagtt
tattggcggaaatgaatatatcgttaaaagcaattatgaaaagagtaggacatagagatg
aaaaaacgactataaaggtgtatacacatgtaacagagaaaatggacagagagttagagc
aaaaattagaaaaacttgtgtactaaaaggtatctgccctttttctgcccttttttattt
ttaaagacgctacaaatcctttgtaacaactgatattaaaggctttttaacacaagtta

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