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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
 The SEED


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Protein fig|351745.7.peg.2306: Shewanella sp. W3-18-1

This feature in The SEED Viewer

NCBI Taxonomy Id: 351745

Current Assignment: hypothetical protein
Translate Function Assignments


Context on contig NC_008750 from base 2840959 to 2853114 (12156 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
2299 2841633 2840959 675 -           Roi protein Sputw3181_2459, YP_963837.1, gi|120599263, InterPro:IPR010916, GeneID:4659015
2300 2841911 2842402 492 + 277         hypothetical protein Sputw3181_2460, YP_963838.1, gi|120599264, InterPro:IPR005569, GeneID:4658986
2301 2842959 2842441 519 - 38         lipoprotein, putative Sputw3181_2461, YP_963839.1, gi|120599265, InterPro:IPR000437, GeneID:4659240
2302 2843759 2843046 714 - 86     1: 1 cwn
ff		 Phage tail assembly protein #Phage tail assembly protein K Sputw3181_2462, YP_963840.1, gi|120599266, InterPro:IPR000064, InterPro:IPR000555, GeneID:4659290
2303 2844536 2843811 726 - 51     1: 1 cwn
ff		 Phage minor tail protein #Phage minor tail protein L Sputw3181_2463, YP_963841.1, gi|120599267, InterPro:IPR006487, GeneID:4659352
2304 2844816 2844529 288 - -8         FIG01061737: hypothetical protein Sputw3181_2464, YP_963842.1, gi|120599268, GeneID:4659415
2305 2846077 2844803 1275 - -14         DGR reverse transcriptase Sputw3181_2465, YP_963843.1, gi|120599269, InterPro:IPR000477, GeneID:4659465
2306 2847692 2846487 1206 - 409         hypothetical protein Sputw3181_2467, YP_963845.1, gi|120599271, GeneID:4659516
2307 2848067 2847732 336 - 39     1: 1 cwn
ff		 Phage minor tail protein #tail protein M Sputw3181_2468, YP_963846.1, gi|120599272, InterPro:IPR010265, GeneID:4659540
2308 2848376 2848071 306 - 3         hypothetical protein Sputw3181_2469, YP_963847.1, gi|120599273, GeneID:4659547
2309 2851794 2848378 3417 - 1     1: 1 ff Phage tail length tape-measure protein 1 Sputw3181_2470, YP_963848.1, gi|120599274, InterPro:IPR006431, InterPro:IPR009628, GeneID:4659657
2310 2852018 2851875 144 - 80       ff FIG01060123: hypothetical protein Sputw3181_2471, YP_963849.1, gi|120599275, GeneID:4659654
2311 2852551 2852057 495 - 38       ff Lambda gpG analog Sputw3181_2472, YP_963850.1, gi|120599276, GeneID:4660239
2312 2853114 2852641 474 - 89       cwn
ff		 prophage LambdaSo, major tail protein V, putative Sputw3181_2473, YP_963851.1, gi|120599277, GeneID:4660250

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|351745.7.peg.2306 hypothetical protein
MAIATVNLGTSPSGAGGDTARNLAEKFNANFSAPTHSASREVGTSNDNHVIDKAGLQILI
KDPRRQEVEALSGGRNTVIYDSQGNPNVMVVVPRFTYESLGLTDLQLGTGTPTAFLTNGA
PRGEILIAKYLASAGGTTCSVVGGVQPLTSVTYDQAKSRCTGKGANWHLMSMHEWAAIAL
WSLANGTVPRGNTNFGRAHDKLFETARRADNGVPGDASGTGRTDTGKGPATWSHDHTVHG
IMDLVGNVWEWQDQTMLSEGQIKTTIDNNPSVAEVDWVSHPAFYDSTSAAGGAPRLNSQV
INRLGAIGDSANAGNSASVEFKLLTKEAAYTPSELMRRLLIETATANNLQGRVYVRNFGQ
RLPIRGGDWSSGVSAGLGALNLNYSRSSSSIYVGFRPAYFA

MD5 = b0bf19344b0e3435bd275db8efa0a1fa


  DNA Sequence

>fig|351745.7.peg.2306 hypothetical protein
atggctatagcaacagtcaatctaggcacatctccgtcgggagctggcggcgatacagcg
cgtaacttagccgaaaaatttaatgctaatttcagcgcgccgactcattccgcttcccgc
gaagtcggcacgtcaaatgataatcatgtcattgacaaagcaggactgcagattctgatt
aaagatccacgtcgacaggaggttgaggcgttaagcggcggacgaaacactgtcatttat
gattcccaaggcaatccaaatgtgatggttgtggtgccgagattcacctacgaatcgctt
ggcctaactgacctacaacttggaacgggaaccccaaccgcctttttgacaaacggagcc
ccacgcggagaaatattgatcgcaaaatatctcgccagcgccggcggtacaacgtgctca
gttgttggtggtgttcagccattaacatcggttacttatgatcaggcaaaatcacggtgc
actggtaagggcgcaaattggcatttaatgtcaatgcatgagtgggcggcaattgcgcta
tggtctcttgctaacggtactgtgccccgcggcaatacaaactttggtcgcgctcacgat
aaattatttgaaacggcccgtcgtgcagataatggtgtgccaggtgacgccagtggcaca
ggaagaactgatacagggaaagggcctgcaacttggtcgcacgatcatactgtgcacggg
ataatggatttagttggaaatgtttgggaatggcaagatcaaacgatgctgtcagaagga
cagataaaaacaacgatcgacaataacccatctgttgccgaggttgactgggtttcacat
ccagcattttacgattcaacatcagccgcaggtggagccccgcgactaaatagccaagtg
atcaaccgccttggggcaataggagacagtgctaacgctggcaattcggctagcgtggaa
tttaaattgctaacaaaggaggcggcctacacaccaagcgagctaatgcggcggctgctt
attgaaacagctactgcaaataatttgcagggccgagtgtacgtgcgcaacttcggccag
cgattaccgatccgtggcggcgactggagcagcggcgtcagcgccggccttggcgcgctc
aacctcaattactcgcgttcgagctcgagcatctacgtcggtttccgtccagcttatttt
gcgtaa


  DNA with Flanking Sequence

>fig|351745.7.peg.2306 hypothetical protein
ttgccaagcagctaaacgccaaaacgcagcaagtgaccgctgatatggaagccatgatga
ttgaatctttgcagccaaatgggtttatttggcagaaaattcaaaaaatgaaaggcttat
aaataatgcctcaaacattcacatgggcaccagataatggcgccacaggcgacacccaat
atcgcactcgctctgcccagtttggtgatggctacagccaatcagtaggcgatggcatta
acagcaaggtgcaaagctggccgctaacgttcaccaaaaacaaagccacggcggaggcga
tagtcgcctttcttgatgaacaccaaggcgctaagtcatttatctggacgccaccccttg
gtagtcaatcgctatggcaagttaaacaggtcaccaacaccccattaggcggcggcatgt
atcgcatcgccgccactttcgaacaagcatttcatccttgatgcgccctggcgctgaacc
aatctatttatggagttaatatggctatagcaacagtcaatctaggcacatctccgtcgg
gagctggcggcgatacagcgcgtaacttagccgaaaaatttaatgctaatttcagcgcgc
cgactcattccgcttcccgcgaagtcggcacgtcaaatgataatcatgtcattgacaaag
caggactgcagattctgattaaagatccacgtcgacaggaggttgaggcgttaagcggcg
gacgaaacactgtcatttatgattcccaaggcaatccaaatgtgatggttgtggtgccga
gattcacctacgaatcgcttggcctaactgacctacaacttggaacgggaaccccaaccg
cctttttgacaaacggagccccacgcggagaaatattgatcgcaaaatatctcgccagcg
ccggcggtacaacgtgctcagttgttggtggtgttcagccattaacatcggttacttatg
atcaggcaaaatcacggtgcactggtaagggcgcaaattggcatttaatgtcaatgcatg
agtgggcggcaattgcgctatggtctcttgctaacggtactgtgccccgcggcaatacaa
actttggtcgcgctcacgataaattatttgaaacggcccgtcgtgcagataatggtgtgc
caggtgacgccagtggcacaggaagaactgatacagggaaagggcctgcaacttggtcgc
acgatcatactgtgcacgggataatggatttagttggaaatgtttgggaatggcaagatc
aaacgatgctgtcagaaggacagataaaaacaacgatcgacaataacccatctgttgccg
aggttgactgggtttcacatccagcattttacgattcaacatcagccgcaggtggagccc
cgcgactaaatagccaagtgatcaaccgccttggggcaataggagacagtgctaacgctg
gcaattcggctagcgtggaatttaaattgctaacaaaggaggcggcctacacaccaagcg
agctaatgcggcggctgcttattgaaacagctactgcaaataatttgcagggccgagtgt
acgtgcgcaacttcggccagcgattaccgatccgtggcggcgactggagcagcggcgtca
gcgccggccttggcgcgctcaacctcaattactcgcgttcgagctcgagcatctacgtcg
gtttccgtccagcttattttgcgtaaagtagactgtgttttgttagctgcgcgatagcgc
agcggttaattaaagagtagcgcacatgccagcattgataatcgaagaaaaatgcagaga
gatgatagtgtttggctatcaagccattaaacagttcccaaaacatgaaacacatgttct
tggcgctgaaattcggctgtcaatgctgaatatgcagcgcctaatcatcactgcaatgaa
gcgctaccacaaaaagaccaccttaaccgacttggacgtagaactagcggtgctaaagcg
gatgataaggctggccaaggatctgcgttatatcgacatcagccggtatcagcgatggat
agtgcagattgttgaaattggcaaaatgacgggaggatggattaaatcaattaacaataa
acaggctaatgcattatgaatacactggaaccgatccgtggcggcaactggaacaacggc
gtcaacgccggccttggcgcgctcaacctcaataactcgcgttcga


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
fig|351745.9.peg.2582 Shewanella sp. W3-18-1 FIG   hypothetical protein
gb|ABM25291.1 Shewanella sp. W3-18-1     hypothetical protein Sputw3181_2467
gi|120559364 Shewanella sp. W3-18-1 NCBI   hypothetical protein Sputw3181_2467
gi|120599271 Shewanella sp. W3-18-1 NCBI   hypothetical protein Sputw3181_2467
img|639816558 Shewanella sp. W3-18-1 IMG   hypothetical protein
kegg|shw:Sputw3181_2467 Shewanella sp. W3-18-1 KEGG   hypothetical protein
ref|YP_963845.1 Shewanella sp. W3-18-1 RefSeq   hypothetical protein Sputw3181_2467
tr|A1RKU6 Shewanella sp. (strain W3-18-1) TrEMBL   Putative uncharacterized protein


  Links to Related Entries in Other Sites

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  Functional Coupling

Score Peg Function


  Attributes

Help on Attributes

Key
Link Explains Key		 Value
PSORT::unknown unknown
similar_to_human no


  Protein Families

No protein families found

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