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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|324831.13.peg.649: Lactobacillus gasseri ATCC 33323

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NCBI Taxonomy Id: 324831

Current Assignment: hypothetical protein
Translate Function Assignments



Context on contig NC_008530 from base 649656 to 661497 (11842 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
637 649656 649919 264 +           hypothetical protein locus|LGAS_0650, protein_id|YP_814482.1, gi|116629310, geneID|4440173
638 649916 650116 201 + -4         hypothetical protein  
639 650113 650469 357 + -4         FIG00746627: hypothetical protein locus|LGAS_0651, protein_id|YP_814483.1, gi|116629311, geneID|4440141
640 650539 650793 255 + 69         hypothetical protein locus|LGAS_0652, protein_id|YP_814484.1, gi|116629312, geneID|4440142
641 650806 651267 462 + 12         Holliday junction resolvase locus|LGAS_0653, protein_id|YP_814485.1, gi|116629313, geneID|4440143
642 651268 651489 222 + 0         hypothetical protein locus|LGAS_0654, protein_id|YP_814486.1, gi|116629314, geneID|4440144
643 651559 651690 132 + 69         hypothetical protein locus|LGAS_0655, protein_id|YP_814487.1, gi|116629315, geneID|4440145
644 651680 651970 291 + -11         FIG00751351: hypothetical protein locus|LGAS_0656, protein_id|YP_814488.1, gi|116629316, geneID|4440146
645 651973 652191 219 + 2         FIG00754532: hypothetical protein locus|LGAS_0657, protein_id|YP_814489.1, gi|116629317, geneID|4440147
646 652178 652345 168 + -14         hypothetical protein locus|LGAS_0658, protein_id|YP_814490.1, gi|116629318, geneID|4440148
647 652375 652905 531 + 29         FIG00747662: hypothetical protein locus|LGAS_0659, protein_id|YP_814491.1, gi|116629319, geneID|4440149
rna.19 653635 653707 73 + 729         tRNA-Gln-TTG  
648 653763 654047 285 + 55     4: 2 1 3 4   Chromosome (plasmid) partitioning protein ParB locus|LGAS_0661, protein_id|YP_814492.1, gi|116629320, geneID|4440151
rna.20 654299 654380 82 + 251         tRNA-Pseudo-???  
649 654488 655105 618 + 107         hypothetical protein locus|LGAS_0663, protein_id|YP_814493.1, gi|116629321, geneID|4440153
650 655288 655944 657 + 182         Phage terminase, large subunit locus|LGAS_0664, protein_id|YP_814494.1, gi|116629322, geneID|4440154
651 656005 656526 522 + 60         Phage terminase, small subunit locus|LGAS_0665, protein_id|YP_814495.1, gi|116629323, geneID|4440155
652 656615 657346 732 + 88         HNH homing endonuclease # Phage intron locus|LGAS_0666, protein_id|YP_814496.1, gi|116629324, geneID|4440156
653 657349 658572 1224 + 2         Phage terminase, large subunit locus|LGAS_0667, protein_id|YP_814497.1, gi|116629325, geneID|4440124
654 658563 659975 1413 + -10         Phage portal protein locus|LGAS_0668, protein_id|YP_814498.1, gi|116629326, geneID|4440125
655 659965 661497 1533 + -11         Phage Mu protein F like protein locus|LGAS_0669, protein_id|YP_814499.1, gi|116629327, geneID|4440126

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|324831.13.peg.649 hypothetical protein
MNVFTNNIIDGYIRWNKNNMISKNFTCGYCGAYVSSDKGMPLVDQGRVNPTESIGVYICT
NCYMPTFIYDDIQVPGNRYGVAVSGVPKDVNDVYEEARSCYGANAFTGVVLLCRKLLMHV
AVDLGAKDNLKFVEYVNYLNENHFVSVKSHDWVDQIRKYGNEATHEIQVNTKEDAQKIIK
FCEMILKMNYEYPSEINDSNDGKNN

MD5 = b861ee79cf0e8e48cdcd4f7d3a87c358


  DNA Sequence

>fig|324831.13.peg.649 hypothetical protein
atgaatgtttttacaaataatattattgatggttatataagatggaataaaaacaatatg
attagcaaaaattttacatgcggttactgtggagcgtatgtttctagtgataaaggaatg
cctcttgtagatcaaggtagagtaaatccgacagaaagtattggtgtgtatatatgtact
aattgttatatgcctacttttatttatgatgatattcaagtaccaggaaatagatatggg
gtagcagttagtggagttcctaaagatgtaaacgatgtttatgaagaagctagaagttgt
tacggtgcaaatgcttttactggagtagttctattgtgcagaaagttattaatgcatgtt
gctgtagatttaggggctaaagataatcttaaatttgttgaatatgtaaattatttaaat
gagaatcattttgtaagtgttaaaagtcatgattgggttgatcaaattcgaaaatacggc
aacgaagcaactcatgaaatacaagttaatactaaagaagatgcacaaaagattataaag
ttttgcgaaatgatattaaaaatgaattatgaatatccttcggagataaatgattcgaat
gatgggaaaaataattaa


  DNA with Flanking Sequence

>fig|324831.13.peg.649 hypothetical protein
gattactggcaaaggtttaataactgtgaacctattgttgatcttcataaatataagtaa
gggtactttgaaggtataattatggtacttcaatagtctttaggtatggttaaatatata
ttgtgagttaatgaaaattaattcaccgcattaatagaattcctctctatatttatgtat
ttaacatttaggctattgctctgtgttagctgcgcatacatgcattctttaagaatgtcc
tttaagagcataattatgattagctttagttttgaaatgcttagttttaagccactaagg
ctaatctttatagcaacttagttcaatgggagaacaaagcgtgtacagttaaacaatgtg
cttgagaaggtggttcgattccatcagttgctgtagtcctttttaggactaaataattcc
attcgtttcaaaaagtcaagtcttttaattaggcttgacttttttataattatttttgaa
acgaatggaggctaaataaaatgaatgtttttacaaataatattattgatggttatataa
gatggaataaaaacaatatgattagcaaaaattttacatgcggttactgtggagcgtatg
tttctagtgataaaggaatgcctcttgtagatcaaggtagagtaaatccgacagaaagta
ttggtgtgtatatatgtactaattgttatatgcctacttttatttatgatgatattcaag
taccaggaaatagatatggggtagcagttagtggagttcctaaagatgtaaacgatgttt
atgaagaagctagaagttgttacggtgcaaatgcttttactggagtagttctattgtgca
gaaagttattaatgcatgttgctgtagatttaggggctaaagataatcttaaatttgttg
aatatgtaaattatttaaatgagaatcattttgtaagtgttaaaagtcatgattgggttg
atcaaattcgaaaatacggcaacgaagcaactcatgaaatacaagttaatactaaagaag
atgcacaaaagattataaagttttgcgaaatgatattaaaaatgaattatgaatatcctt
cggagataaatgattcgaatgatgggaaaaataattaattttataatgactagtcgaaag
gccagctctttttttatgaaggcttttatgaaatttttagcagtagttctaaaatattta
ccattgttggacttagttagcttaaatttatattcatctcaaagaataaatcctattatt
tcgaaattgatttttttataattgttattgaggtgattttatgactgctttaaatgctga
aattagtcctaatagtattattttatctatggatactttagcatcgagaaaaaacaacaa
cggaaaaactattccatcttactttactcaaaaatttgaatattatccttttactcaaag
catattgtgtggaactggagatttttcaattattagactagcttttgatagatctagatc
aattttatcgaaagaagttaaaacatttagtctaataattcgagatgttttaaaaaataa
tattgaaaaagtaaatacagacacaacaatttatatcttcggctttgatgaagatatg


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
fig|324831.10.peg.566 Lactobacillus gasseri ATCC 33323 FIG   hypothetical protein
fig|324831.10.peg.617 Lactobacillus gasseri ATCC 33323 FIG   hypothetical protein
fig|324831.13.peg.588 Lactobacillus gasseri ATCC 33323 FIG   hypothetical protein
fig|363555.2.peg.31 Siphoviridae Lactobacillus phage KC5a FIG   hypothetical protein
fig|559301.5.peg.1299 Lactobacillus gasseri MV-22 FIG   hypothetical protein
fig|559301.5.peg.1322 Lactobacillus gasseri MV-22 FIG   hypothetical protein
fig|559301.5.peg.740 Lactobacillus gasseri MV-22 FIG   hypothetical protein
fig|559301.5.peg.804 Lactobacillus gasseri MV-22 FIG   hypothetical protein
gb|ABD78808.1 Lactobacillus gasseri phage KC5a     hypothetical protein
gb|ABJ59995.1 Lactobacillus gasseri ATCC 33323     hypothetical protein LGAS_0601
gb|ABJ60055.1 Lactobacillus gasseri ATCC 33323     hypothetical protein LGAS_0663
gi|116094843 Lactobacillus gasseri ATCC 33323 NCBI   hypothetical protein LGAS_0601
gi|116094903 Lactobacillus gasseri ATCC 33323 NCBI   hypothetical protein LGAS_0663
gi|116629261 Lactobacillus gasseri ATCC 33323 NCBI   hypothetical protein LGAS_0601
gi|116629321 Lactobacillus gasseri ATCC 33323 NCBI   hypothetical protein LGAS_0663
gi|226819764 Lactobacillus gasseri MV-22 NCBI   hypothetical protein LgasM_03775
gi|226819827 Lactobacillus gasseri MV-22 NCBI   hypothetical protein LgasM_04126
gi|226820316 Lactobacillus gasseri MV-22 NCBI   hypothetical protein LgasM_06729
gi|226820336 Lactobacillus gasseri MV-22 NCBI   hypothetical protein LgasM_06853
gi|89891935 Lactobacillus gasseri phage KC5a NCBI   hypothetical protein
gi|90592606 Lactobacillus phage KC5a NCBI   hypothetical protein LGPKV5a_gp31
img|638319704 Lactobacillus gasseri phage KC5a IMG   hypothetical protein
img|639672458 Lactobacillus gasseri ATCC 33323 IMG   hypothetical protein
img|639672520 Lactobacillus gasseri ATCC 33323 IMG   hypothetical protein
kegg|lga:LGAS_0601 Lactobacillus gasseri ATCC 33323 KEGG   hypothetical protein
kegg|lga:LGAS_0663 Lactobacillus gasseri ATCC 33323 KEGG   hypothetical protein
ref|YP_529866.1 Lactobacillus phage KC5a RefSeq   hypothetical protein LGPKV5a_gp31
ref|YP_814433.1 Lactobacillus gasseri ATCC 33323 RefSeq   hypothetical protein LGAS_0601
ref|YP_814493.1 Lactobacillus gasseri ATCC 33323 RefSeq   hypothetical protein LGAS_0663
ref|ZP_03808883.1 Lactobacillus gasseri MV-22 RefSeq   hypothetical protein LgasM_03775
ref|ZP_03808946.1 Lactobacillus gasseri MV-22 RefSeq   hypothetical protein LgasM_04126
ref|ZP_03809435.1 Lactobacillus gasseri MV-22 RefSeq   hypothetical protein LgasM_06729
ref|ZP_03809455.1 Lactobacillus gasseri MV-22 RefSeq   hypothetical protein LgasM_06853
tr|Q044R7 Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) TrEMBL   Putative uncharacterized protein
tr|Q20DE2 Lactobacillus phage KC5a TrEMBL   Putative uncharacterized protein orf31


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  Attributes

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  Protein Families

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