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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
The SEED


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Protein fig|324831.10.peg.606: Lactobacillus gasseri ATCC 33323

This feature in The SEED Viewer

NCBI Taxonomy Id: 324831

Current Assignment: FIG00744143: hypothetical protein
Translate Function Assignments



Context on contig NC_008530 from base 641970 to 652905 (10936 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
596 642116 641970 147 -           FIG00745371: hypothetical protein  
597 642804 642181 624 - 64         lipoprotein, putative LGAS_0635, YP_814467.1, gi|116629295, GeneID:4440158
598 643351 642869 483 - 64         FIG00742762: hypothetical protein LGAS_0636, YP_814468.1, gi|116629296, GeneID:4440159
599 643664 643326 339 - -26       cwn Cro-like phage transcriptional repressor protein LGAS_0637, YP_814469.1, gi|116629297, GeneID:4440160
600 643818 644042 225 + 153         XRE family transcriptional regulator LGAS_0638, YP_814470.1, gi|116629298, GeneID:4440161
601 644075 644410 336 + 32         Phage related protein LGAS_0639, YP_814471.1, gi|116629299, GeneID:4440162
602 644379 644693 315 + -32         FIG00744823: hypothetical protein LGAS_0640, YP_814472.1, gi|116629300, GeneID:4440163
603 645009 645341 333 + 315         FIG00743546: hypothetical protein LGAS_0642, YP_814474.1, gi|116629302, GeneID:4440165
604 645341 646201 861 + -1         FIG00746299: hypothetical protein LGAS_0643, YP_814475.1, gi|116629303, GeneID:4440166
605 646207 647019 813 + 5         FIG00751630: hypothetical protein LGAS_0644, YP_814476.1, gi|116629304, GeneID:4440167
606 647029 647952 924 + 9         FIG00744143: hypothetical protein LGAS_0645, YP_814477.1, gi|116629305, GeneID:4440168
607 647958 648263 306 + 5         Transcriptional regulator, xre family LGAS_0646, YP_814478.1, gi|116629306, GeneID:4440169
608 648205 649041 837 + -59     1: 1 cwh Phage antirepressor protein LGAS_0647, YP_814479.1, gi|116629307, GeneID:4440170
609 649056 649241 186 + 14         FIG00749519: hypothetical protein LGAS_0648, YP_814480.1, gi|116629308, GeneID:4440171
610 649251 649463 213 + 9         FIG00745651: hypothetical protein LGAS_0649, YP_814481.1, gi|116629309, GeneID:4440172
611 650098 650469 372 + 634         FIG00746627: hypothetical protein LGAS_0651, YP_814483.1, gi|116629311, GeneID:4440141
612 650806 651267 462 + 336         Holliday junction resolvase LGAS_0653, YP_814485.1, gi|116629313, GeneID:4440143
613 651268 651489 222 + 0         hypothetical protein LGAS_0654, YP_814486.1, gi|116629314, GeneID:4440144
614 651635 651970 336 + 145         FIG00751351: hypothetical protein LGAS_0656, YP_814488.1, gi|116629316, GeneID:4440146
615 652375 652905 531 + 404         FIG00747662: hypothetical protein LGAS_0659, YP_814491.1, gi|116629319, GeneID:4440149

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|324831.10.peg.606 FIG00744143: hypothetical protein
MGRRMYSDKIVETDKFLDMPVSSQNLYWHLCMHADDDGFLGNPKTIVRSIGAQQDDLKIL
VEKGYVIVFEDGVIAITDWFVHNYIPKDRYHETVYKEDKKQLELSETKQYRLVTRKPIVQ
DTKSKQVVDNMDTSCIQDDNKVYTEDKLSKDKLSKDNNIYKLSSSENIDTDPEQKSQKIP
YEKIIDYLNRKTNSHYRPTSKATRRLIKARYNEGFTDIDFKSVIDKKCAEWLQDGNMVQY
LRPETLFGTKFEAYLNQPDTGPIPRNNFRNKPVRRATNWDKVQQQQSQTTLQMTREERNA
IFREYGR

MD5 = ac87785e949f0150aa02fdb2827b4bfc


  DNA Sequence

>fig|324831.10.peg.606 FIG00744143: hypothetical protein
atgggtagaagaatgtacagcgataagattgttgaaactgataaattcttagatatgccc
gtatctagtcaaaatctatattggcacttatgtatgcacgcagatgatgatggattttta
ggaaatcctaaaactatagttagatcaattggtgcacaacaagacgatttaaaaattcta
gttgaaaagggatacgtaattgtatttgaagatggagtaattgctataacagactggttc
gttcataactacattcctaaagatcgctatcatgaaacagtttataaagaagataaaaaa
caacttgagctgtccgaaaccaagcaataccgccttgttacaagaaagccgattgttcag
gatacaaaaagtaaacaagttgtagacaacatggatacatcttgtatacaagatgataac
aaagtgtataccgaagataagttaagtaaagataagttaagtaaagataataatatatat
aaattgtcgagttcagagaacatcgacaccgatccagaacaaaaatctcaaaaaatacct
tacgaaaaaattatcgattacttaaacagaaagactaattcacattatcgtccaacttct
aaagctactaggcgactaattaaagctagatacaacgagggctttactgatattgacttt
aagtctgttatagacaagaagtgtgctgaatggctacaagatggcaacatggttcagtac
ttaagaccagaaactctttttggaactaagtttgaagcatatctaaatcagccagataca
ggacctattccacgaaacaattttagaaataagccagttcgaagggctacaaactgggat
aaggttcagcaacaacaatcgcaaacaacactacaaatgacgcgagaagaacgtaacgca
attttcagagagtacgggaggtaa


  DNA with Flanking Sequence

>fig|324831.10.peg.606 FIG00744143: hypothetical protein
aagtttggtttaaaaactttaatgtgggagacgcacagaaaacagctagcttaatcagtt
atgctaagcgttattccttaagtgcagcttttggaattgctagtgaagatgacgatgatg
cgcaggacgtaaaaaatattgaagagcctaaagtcttatctaaacaagagttagataatt
acacggtttactataacggaattaaagctaatctagctgaattatatcaagaagctgtag
atggaattgctgatgctcaagattggattagaggatcacatactccgcaggacgcccaag
ccatttatcagttaaatcaaagttacaaacggcgtgaaaaagataagcaagaggctttaa
agaaagccgaagaggaagctaaaaaagaagaaaaattaagagaagcacagcgaagtgaag
agaagccaaaacaagaagatgtatccaatttattcggaacattacctgctgacggggaat
acatcaaataggaggtcaaaatgggtagaagaatgtacagcgataagattgttgaaactg
ataaattcttagatatgcccgtatctagtcaaaatctatattggcacttatgtatgcacg
cagatgatgatggatttttaggaaatcctaaaactatagttagatcaattggtgcacaac
aagacgatttaaaaattctagttgaaaagggatacgtaattgtatttgaagatggagtaa
ttgctataacagactggttcgttcataactacattcctaaagatcgctatcatgaaacag
tttataaagaagataaaaaacaacttgagctgtccgaaaccaagcaataccgccttgtta
caagaaagccgattgttcaggatacaaaaagtaaacaagttgtagacaacatggatacat
cttgtatacaagatgataacaaagtgtataccgaagataagttaagtaaagataagttaa
gtaaagataataatatatataaattgtcgagttcagagaacatcgacaccgatccagaac
aaaaatctcaaaaaataccttacgaaaaaattatcgattacttaaacagaaagactaatt
cacattatcgtccaacttctaaagctactaggcgactaattaaagctagatacaacgagg
gctttactgatattgactttaagtctgttatagacaagaagtgtgctgaatggctacaag
atggcaacatggttcagtacttaagaccagaaactctttttggaactaagtttgaagcat
atctaaatcagccagatacaggacctattccacgaaacaattttagaaataagccagttc
gaagggctacaaactgggataaggttcagcaacaacaatcgcaaacaacactacaaatga
cgcgagaagaacgtaacgcaattttcagagagtacgggaggtaaccaccatgcaaaatag
gctaaagaaattgagattggaaaagagattaactcttgccgatatacaagctaaaaccaa
cattgattttagaattttagaaaatttcgaaaaaggattggaaaatggaatacataactc
tttagcaatttggcaaaagttggctaactttttagaagttccaattgagtacctaatggg
attaaacgacgatagcaagacattaactgttaacgacttgaacccagccaaagaagatgc
ttacgagcgtattacggatatgctatgcgaagatgaggacgatgaagatgaataacgaat
taatcaaagtaacggtcaagaatgaccagcaactagttagtgctagagatttatataagg
gattaggtatcaagcgaagattttccgcttggtgggaacagaacagcaatgactttaaag
aaaatagtgatttccaacgtgtacttataagtacacctagagaaaaccgcggtagcattg
agct


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
fig|324831.10.peg.555 Lactobacillus gasseri ATCC 33323 FIG   FIG00744143: hypothetical protein
fig|324831.13.peg.571 Lactobacillus gasseri ATCC 33323 FIG   FIG00744143: hypothetical protein
fig|324831.13.peg.632 Lactobacillus gasseri ATCC 33323 FIG   FIG00744143: hypothetical protein
gb|ABJ59979.1 Lactobacillus gasseri ATCC 33323     hypothetical protein LGAS_0583
gb|ABJ60039.1 Lactobacillus gasseri ATCC 33323     hypothetical protein LGAS_0645
gi|116094827 Lactobacillus gasseri ATCC 33323 NCBI   hypothetical protein LGAS_0583
gi|116094887 Lactobacillus gasseri ATCC 33323 NCBI   hypothetical protein LGAS_0645
gi|116629245 Lactobacillus gasseri ATCC 33323 NCBI   hypothetical protein LGAS_0583
gi|116629305 Lactobacillus gasseri ATCC 33323 NCBI   hypothetical protein LGAS_0645
img|639672440 Lactobacillus gasseri ATCC 33323 IMG   hypothetical protein
img|639672502 Lactobacillus gasseri ATCC 33323 IMG   hypothetical protein
kegg|lga:LGAS_0583 Lactobacillus gasseri ATCC 33323 KEGG   hypothetical protein
kegg|lga:LGAS_0645 Lactobacillus gasseri ATCC 33323 KEGG   hypothetical protein
ref|YP_814417.1 Lactobacillus gasseri ATCC 33323 RefSeq   hypothetical protein LGAS_0583
ref|YP_814477.1 Lactobacillus gasseri ATCC 33323 RefSeq   hypothetical protein LGAS_0645
tr|Q044T3 Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) TrEMBL   Putative uncharacterized protein


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  Functional Coupling

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  Attributes

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  Protein Families

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