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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|323097.6.peg.3319: Nitrobacter hamburgensis X14

This feature in The SEED Viewer

NCBI Taxonomy Id: 323097

Current Assignment: Uncharacterized phage-encoded protein-like
Translate Function Assignments


Context on contig NC_007964 from base 2663189 to 2674796 (11608 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
3315 2664202 2663189 1014 -           FIG00852787: hypothetical protein locus|Nham_2402, protein_id|YP_577653.1, gi|92117924, geneID|4030615
3316 2665560 2666222 663 + 1357         Phage repressor protein cI locus|Nham_2405, protein_id|YP_577656.1, gi|92117927, InterPro:IPR006198, geneID|4030618
3317 2666770 2667285 516 + 547         FIG00853276: hypothetical protein locus|Nham_2406, protein_id|YP_577657.1, gi|92117928, geneID|4030619
3318 2668471 2668010 462 - 724         hypothetical protein locus|Nham_2407, protein_id|YP_577658.1, gi|92117929, geneID|4030620
3319 2669068 2669724 657 + 596         Uncharacterized phage-encoded protein-like locus|Nham_2408, protein_id|YP_577659.1, gi|92117930, geneID|4030621
3320 2669721 2670050 330 + -4         hypothetical protein locus|Nham_2409, protein_id|YP_577660.1, gi|92117931, geneID|4030622
3321 2670121 2670261 141 + 70         hypothetical protein  
3322 2670288 2671010 723 + 26         hypothetical protein locus|Nham_2410, protein_id|YP_577661.1, gi|92117932, geneID|4030623
3323 2671013 2671603 591 + 2         hypothetical protein locus|Nham_2411, protein_id|YP_577662.1, gi|92117933, geneID|4030624
3324 2672132 2673097 966 + 528         phage integrase locus|Nham_2413, protein_id|YP_577663.1, gi|92117934, InterPro:IPR002104, geneID|4030626
3325 2673810 2674796 987 + 712         FIG003573: hypothetical protein locus|Nham_2414, protein_id|YP_577664.1, gi|92117935, geneID|4030627

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|323097.6.peg.3319 Uncharacterized phage-encoded protein-like
MSSREIAELVESRHDSVKRTVERLVERGVIGLPPTVEYPDTLGRKATEYRIGKRDSYIVV
AQLSPEFTARLVDRWQELESTSGRALPQSFADALQLAADQARQIEQQHTLLIEQQPKVEF
YDQFVKADGLLGYQEAGTAAGCYPNKFCNWLKIDHLFYRGKKLMPRSQFVRRGLFEIRPE
LDANGESHLRGWVTAKGVEHFAKHAPDWIRITPREVKP

MD5 = aee9620227ecac8a529e0f73cdb917b6


  DNA Sequence

>fig|323097.6.peg.3319 Uncharacterized phage-encoded protein-like
atgtcgagccgcgagatcgcggagctggtcgagagccggcacgacagcgtcaagcgcacg
gtcgaacgcctggttgagcggggtgtaatcggtcttccaccaacggtggaataccccgac
acgctagggcggaaggctactgagtaccggataggcaagcgcgacagctacattgtcgtc
gcccaactctccccggagttcactgcccggctcgtcgaccgctggcaggagctggagtcc
accagtggccgcgccctaccgcaatcctttgccgatgccttgcagctcgcggcagaccaa
gcgcgtcagatcgaacaacagcacacgctactcattgagcaacagcctaaggtcgagttt
tacgaccagttcgtaaaagccgatggcttgctcgggtatcaagaagctggcaccgccgcc
ggctgctacccgaacaagttctgcaactggctgaagatcgaccatctgttttatcgcggc
aagaagttgatgccgcggtcgcaattcgtccgccgtggtctttttgagatccggccagaa
ctcgacgccaacggcgagtcgcatctgcggggctgggttacggcgaaaggcgtcgagcat
tttgcaaagcatgctcccgactggattcggatcaccccgcgggaggtgaagccgtga


  DNA with Flanking Sequence

>fig|323097.6.peg.3319 Uncharacterized phage-encoded protein-like
acgtaataggtgatctggctcatttctactctccactttgatgaccacgatgtttctgcc
ctcaccgccggcatgtcggcattccgagcagtgaaaccgcccccaggtatcccgaccggg
ctccaatccgatcgctgccaatgcctccgtcgtaatccgccttgcccggccgcaatccga
gcaattcaacaaaaacgcttccaacagcccgccccgtttgttcttcttatgttctcataa
aaccttgatcgcggacgagagtcgagtcccctgattcggagacagggcctgaatgtattt
tctgattatcgaaattttatagttgactgattttctgtttttcgaaatactcttctcacg
atccaacaccacagggaccggggagagagtgaatgcgatccgcagtatccgcgcacagcc
agtcatcgactgtcccggcgcttcaccttccagcaaccgccgcacagcccaccccgttcg
ccactggcgtcgcgccgacgatgtcgagccgcgagatcgcggagctggtcgagagccggc
acgacagcgtcaagcgcacggtcgaacgcctggttgagcggggtgtaatcggtcttccac
caacggtggaataccccgacacgctagggcggaaggctactgagtaccggataggcaagc
gcgacagctacattgtcgtcgcccaactctccccggagttcactgcccggctcgtcgacc
gctggcaggagctggagtccaccagtggccgcgccctaccgcaatcctttgccgatgcct
tgcagctcgcggcagaccaagcgcgtcagatcgaacaacagcacacgctactcattgagc
aacagcctaaggtcgagttttacgaccagttcgtaaaagccgatggcttgctcgggtatc
aagaagctggcaccgccgccggctgctacccgaacaagttctgcaactggctgaagatcg
accatctgttttatcgcggcaagaagttgatgccgcggtcgcaattcgtccgccgtggtc
tttttgagatccggccagaactcgacgccaacggcgagtcgcatctgcggggctgggtta
cggcgaaaggcgtcgagcattttgcaaagcatgctcccgactggattcggatcaccccgc
gggaggtgaagccgtgatcgataaatcctcaaatcgcggcgaaggaccgaccccggccgc
cattcgcgaggctgttgtggatgcggcgatgtgcggccttagacgccgtagaacgccgtc
ccgaaagaacccgctgtatgtgccgccgacaccggcagacgctgcatggacccacgtcta
tggcacggcgcgtgcattcgtggaatgggcgaccgacgcaaacatcaacctcgcgaccac
cggcctgcgcgaacgggatgacagccaggcgtcgaatatccgcgcggttcgggactgcgc
caacatcttccgcgcgctcgtggagcagatcgatgctcaataggcgcgtcgcgaatttta
ccgagcttgtttggtccacggtcggcaatagcgctcctgtcgataagcgcaggatggagc
ttctgggtgcaaggggcgtcagcaggtttacaccgtcggtggaaacctcccacaagggcg
ccgcgttgatcgtcgccatcgccctcttcatttcaac


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

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  Protein Families

No protein families found

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