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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|323097.6.peg.3318: Nitrobacter hamburgensis X14

This feature in The SEED Viewer

NCBI Taxonomy Id: 323097

Current Assignment: hypothetical protein
Translate Function Assignments



Context on contig NC_007964 from base 2662546 to 2673097 (10552 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
3314 2663067 2662546 522 -           hypothetical protein locus|Nham_2401, protein_id|YP_577652.1, gi|92117923, geneID|4030614
3315 2664202 2663189 1014 - 121         FIG00852787: hypothetical protein locus|Nham_2402, protein_id|YP_577653.1, gi|92117924, geneID|4030615
3316 2665560 2666222 663 + 1357         Phage repressor protein cI locus|Nham_2405, protein_id|YP_577656.1, gi|92117927, InterPro:IPR006198, geneID|4030618
3317 2666770 2667285 516 + 547         FIG00853276: hypothetical protein locus|Nham_2406, protein_id|YP_577657.1, gi|92117928, geneID|4030619
3318 2668471 2668010 462 - 724         hypothetical protein locus|Nham_2407, protein_id|YP_577658.1, gi|92117929, geneID|4030620
3319 2669068 2669724 657 + 596         Uncharacterized phage-encoded protein-like locus|Nham_2408, protein_id|YP_577659.1, gi|92117930, geneID|4030621
3320 2669721 2670050 330 + -4         hypothetical protein locus|Nham_2409, protein_id|YP_577660.1, gi|92117931, geneID|4030622
3321 2670121 2670261 141 + 70         hypothetical protein  
3322 2670288 2671010 723 + 26         hypothetical protein locus|Nham_2410, protein_id|YP_577661.1, gi|92117932, geneID|4030623
3323 2671013 2671603 591 + 2         hypothetical protein locus|Nham_2411, protein_id|YP_577662.1, gi|92117933, geneID|4030624
3324 2672132 2673097 966 + 528         phage integrase locus|Nham_2413, protein_id|YP_577663.1, gi|92117934, InterPro:IPR002104, geneID|4030626

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|323097.6.peg.3318 hypothetical protein
MSDSIRLARTDTYEHTISGLLKKRADLFNEAERIRDRMAEIKNDISALDRVLGTLGYTGD
LDAEMPRQKRQVLFGRGELTRAILDELRDAPRPLGSREIAQGIVALSGQDARDRKYVTDL
TRRVSKALRMLKESGSVRSLGDCKGNLRWTLQS

MD5 = 211f4262f583681514ac8631a7efc20a


  DNA Sequence

>fig|323097.6.peg.3318 hypothetical protein
atgtccgactccatccgccttgcccgcaccgatacctacgagcacaccatttcgggcttg
ctcaaaaagcgcgccgatctgttcaacgaagccgagcgcatccgcgatcgaatggccgaa
atcaaaaacgacattagcgcgctggatcgggtgctagggacgctcggttataccggcgat
ctggacgccgaaatgccacgccagaagcggcaagtcctgttcgggcgcggagagctaacg
cgggcgattttggacgagctacgggatgcgccgcgaccgttaggaagccgagagatagct
caaggaattgttgcgctgagcggtcaggacgcgcgggatcgtaagtacgtaacggacctg
acaaggcgggtcagcaaggcgcttcggatgctcaaagagagcgggtcggtacggtctctc
ggggattgcaagggtaatttgcgatggacgttgcagtcttga


  DNA with Flanking Sequence

>fig|323097.6.peg.3318 hypothetical protein
tgcggatcgcattcactctctccccggtccctgtggtgttggatcgtgagaagagtattt
cgaaaaacagaaaatcagtcaactataaaatttcgataatcagaaaatacattcaggccc
tgtctccgaatcaggggactcgactctcgtccgcgatcaaggttttatgagaacataaga
agaacaaacggggcgggctgttggaagcgtttttgttgaattgctcggattgcggccggg
caaggcggattacgacggaggcattggcagcgatcggattggagcccggtcgggatacct
gggggcggtttcactgctcggaatgccgacatgccggcggtgagggcagaaacatcgtgg
tcatcaaagtggagagtagaaatgagccagatcacctattacgtcgttcagccgttcgag
ttggataagaacggtattaggtagcaaactcaccaagcaatggatggtctagcgagccgc
gttttgcgaccttcctgcctatgtccgactccatccgccttgcccgcaccgatacctacg
agcacaccatttcgggcttgctcaaaaagcgcgccgatctgttcaacgaagccgagcgca
tccgcgatcgaatggccgaaatcaaaaacgacattagcgcgctggatcgggtgctaggga
cgctcggttataccggcgatctggacgccgaaatgccacgccagaagcggcaagtcctgt
tcgggcgcggagagctaacgcgggcgattttggacgagctacgggatgcgccgcgaccgt
taggaagccgagagatagctcaaggaattgttgcgctgagcggtcaggacgcgcgggatc
gtaagtacgtaacggacctgacaaggcgggtcagcaaggcgcttcggatgctcaaagaga
gcgggtcggtacggtctctcggggattgcaagggtaatttgcgatggacgttgcagtctt
gaaacttctatcctaaaacctacctgctcgcgcattggaataggggtatcttcactccaa
cgaatcattgacattctgagcgatctttgatgcttggagttgattcgttgcgcctgttcc
cttaagcatctcaaatcgttgaggttccaatagagagctggaacctttgcggctggtttt
tgtttttttacgttcggccgctacagatcgtagtgtccttacctggagtggacaccatgc
ctaactcaacagaccttcgccttctcgccccaaaggctttcccttcccatgcttataagc
aggaaagtgaaatccgaaatgacaataacagcgagaaaacacgcgaagatttgtggcttg
aagctgctcggcttcaacgggctgaaatttcggcaagccaagtcgactttcttacggaac
ttcgcaggcgcacccgatagtaatttagcaattttgaggtaagcgtgcctgtcgtaaatg
tcgcggcggatgatattatcgc


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
cmr|NT01NH0251 Nitrobacter hamburgensis X14     conserved hypothetical protein
cmr|NT01NH2901 Nitrobacter hamburgensis X14     conserved hypothetical protein
fig|323097.3.peg.2940 Nitrobacter hamburgensis X14 FIG   hypothetical protein
fig|323097.3.peg.645 Nitrobacter hamburgensis X14 FIG   hypothetical protein
fig|323097.6.peg.916 Nitrobacter hamburgensis X14 FIG   hypothetical protein
gb|ABE61104.1 Nitrobacter hamburgensis X14     conserved hypothetical protein
gb|ABE63198.1 Nitrobacter hamburgensis X14     conserved hypothetical protein
gi|91798729 Nitrobacter hamburgensis X14 NCBI   conserved hypothetical protein
gi|91800823 Nitrobacter hamburgensis X14 NCBI   conserved hypothetical protein
gi|92115835 Nitrobacter hamburgensis X14 NCBI   hypothetical protein Nham_0204
gi|92117929 Nitrobacter hamburgensis X14 NCBI   hypothetical protein Nham_2407
img|637968739 Nitrobacter hamburgensis X14 IMG   hypothetical protein
img|637970867 Nitrobacter hamburgensis X14 IMG   hypothetical protein
kegg|nha:Nham_0204 Nitrobacter hamburgensis X14 KEGG   hypothetical protein
kegg|nha:Nham_2407 Nitrobacter hamburgensis X14 KEGG   hypothetical protein
ref|YP_575564.1 Nitrobacter hamburgensis X14 RefSeq   hypothetical protein Nham_0204
ref|YP_577658.1 Nitrobacter hamburgensis X14 RefSeq   hypothetical protein Nham_2407
tr|Q1QKP9 Nitrobacter hamburgensis (strain X14 / DSM 10229) TrEMBL   Putative uncharacterized protein


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  Functional Coupling

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  Attributes

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  Protein Families

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