Protein Page for fig|272626.9.peg.1292

SEED version cvs.1555556707 (3/17/2019 22:5:7) on aspen.cels.anl.gov

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Protein fig|272626.9.peg.1292: Listeria innocua Clip11262

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NCBI Taxonomy Id: 272626

Current Assignment: Phage antirepressor protein

Translate Function Assignments

Context on contig NC_003212 from base 1259830 to 1271803 (11974 bp)


Fid	Start	End	Size (nt)		Gap	SS	Function	Aliases
1283	1259830	1261191	1362	+			FIG00776219: hypothetical protein	locus\|lin1253, protein_id\|NP_470590.1, gi\|16800322, geneID\|1129821
1284	1261204	1261428	225	+	12		hypothetical protein
1285	1261428	1262372	945	+	-1		Phage integrase	locus\|lin1254, protein_id\|NP_470591.1, gi\|16800323, geneID\|1129822
1286	1262385	1263065	681	+	12		FIG00775669: hypothetical protein	locus\|lin1255, protein_id\|NP_470592.1, gi\|16800324, geneID\|1129823
1287	1263062	1263355	294	+	-4		hypothetical protein	locus\|lin1256, protein_id\|NP_470593.1, gi\|16800325, geneID\|1129825
1288	1263491	1263643	153	+	135		hypothetical protein
1289	1264293	1263766	528	-	122		conserved hypothetical protein	locus\|lin1257, protein_id\|NP_470594.1, gi\|16800326, geneID\|1129826
1290	1264362	1264922	561	+	68		FIG00774160: hypothetical protein	locus\|lin1258, protein_id\|NP_470595.1, gi\|16800327, geneID\|1129827
1291	1265003	1265425	423	+	80		hypothetical protein	locus\|lin1259, protein_id\|NP_470596.1, gi\|16800328, geneID\|1129828
1292	1265438	1266205	768	+	12		Phage antirepressor protein	locus\|lin1260, protein_id\|NP_470597.1, gi\|16800329, geneID\|1129829
1293	1266855	1267334	480	+	649		hypothetical protein	locus\|lin1261, protein_id\|NP_470598.1, gi\|16800330, geneID\|1129831
1294	1267399	1268736	1338	+	64	1: 1	Phage DNA modification methylase	locus\|lin1262, protein_id\|NP_470599.1, gi\|16800331, geneID\|1129832
1295	1268784	1268981	198	+	47		hypothetical protein	locus\|lin1263, protein_id\|NP_470600.1, gi\|16800332, geneID\|1129833
1296	1269111	1269341	231	+	129		FIG00774828: hypothetical protein	locus\|lin1264, protein_id\|NP_470601.1, gi\|16800333, geneID\|1129834
1297	1269369	1269593	225	+	27		hypothetical protein	locus\|lin1265, protein_id\|NP_470602.1, gi\|16800334, geneID\|1129835
1298	1269646	1270482	837	+	52		Phage terminase, small subunit	locus\|lin1266, protein_id\|NP_470603.1, gi\|16800335, geneID\|1129836
1299	1270469	1271803	1335	+	-14		Phage terminase, large subunit ## PBSX family	locus\|lin1267, protein_id\|NP_470604.1, gi\|16800336, geneID\|1129838

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Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

Protein Sequence

>fig|272626.9.peg.1292 Phage antirepressor protein
MNNLAVLDKNNTLNSREVAEMVEKRHSDLLRDIETYIRYINQNAKLRSDDFFSESTYQAG
TGKDYKCYEITKMGCEMIANKLTGAKGIQFTALFVQKFNKLEEKEMQTFYIPGTYAEALT
LAAKQAELNEQLMLENEVKTQTIAEYEPKVSYYDQILKSPGLITVTQIAADYDLTAHKLN
KILYEEQVQHKVGGQWILYKKHMNLGLTKSETVSIVHSNGRLGTKVNTKWTQKGRLFIHE
ILEKVGIQAVIDKDI

MD5 = aac38711c23e6421fca6a50e36ce0062

DNA Sequence

>fig|272626.9.peg.1292 Phage antirepressor protein
atgaataatttagcagtattagataaaaataatacattaaacagtcgtgaagttgctgaa
atggtagaaaaaaggcactctgatttactacgtgatatcgaaacttatattagatatatc
aatcaaaacgcaaaactgcgttctgatgattttttcagtgaatctacttatcaagctggc
accgggaaagattataagtgctatgaaatcacaaaaatgggctgtgaaatgatagccaat
aaattaactggggcaaaaggcattcagtttacagctttatttgtacaaaagttcaacaag
ttagaagaaaaagaaatgcaaactttttatattccaggaacctacgcagaagcacttaca
cttgcagcaaaacaagctgaactaaatgagcagttaatgttagaaaatgaagtgaaaaca
caaactatagccgaatatgaaccaaaagtgagttattatgatcagattttaaaatctcct
ggattaataactgttacgcaaattgcagctgactatgacttgaccgcacataagctcaat
aaaatattatacgaagagcaggtgcagcataaagttggtgggcagtggatattatacaaa
aaacatatgaatttaggtttgactaaatcagaaacggtcagcatagttcatagtaatgga
cgtctaggaacaaaagtaaacaccaagtggacacaaaaagggagattatttatacatgaa
attcttgaaaaagttggaattcaggctgttatcgacaaggatatttaa

DNA with Flanking Sequence

>fig|272626.9.peg.1292 Phage antirepressor protein
ccgctccggcgtggaatgtgattcctagacaaaatcattataccacaatggaggggttgc
gtgtgatggcgctgttcgaactaccgcaaattaacaatgttagaacaaaaagaaacgtaa
taagagctttagaaaaatataaaattatgagagttagactcggcgagagaagaatgccaa
agttaacttctacattgaccatagtgccaccatcatttaataatgaattccattctacga
cagaagaaagtgcaatatggaatgtagatgcagtaaatgaagcaaaagcatatgttaaat
tgattgatcatcacatcaaccaacttcctgaacggagtaggcaagtgatactaactaaat
tcattgaagaaaatagtgattatgaagctatgttggccatacatgtaagtcactcgcagt
acaaagaagaaaagagaaaagcaattgaacgcctagcctatcagcttaatatagtagttg
aaaaatgaggagggaacacaatgaataatttagcagtattagataaaaataatacattaa
acagtcgtgaagttgctgaaatggtagaaaaaaggcactctgatttactacgtgatatcg
aaacttatattagatatatcaatcaaaacgcaaaactgcgttctgatgattttttcagtg
aatctacttatcaagctggcaccgggaaagattataagtgctatgaaatcacaaaaatgg
gctgtgaaatgatagccaataaattaactggggcaaaaggcattcagtttacagctttat
ttgtacaaaagttcaacaagttagaagaaaaagaaatgcaaactttttatattccaggaa
cctacgcagaagcacttacacttgcagcaaaacaagctgaactaaatgagcagttaatgt
tagaaaatgaagtgaaaacacaaactatagccgaatatgaaccaaaagtgagttattatg
atcagattttaaaatctcctggattaataactgttacgcaaattgcagctgactatgact
tgaccgcacataagctcaataaaatattatacgaagagcaggtgcagcataaagttggtg
ggcagtggatattatacaaaaaacatatgaatttaggtttgactaaatcagaaacggtca
gcatagttcatagtaatggacgtctaggaacaaaagtaaacaccaagtggacacaaaaag
ggagattatttatacatgaaattcttgaaaaagttggaattcaggctgttatcgacaagg
atatttaaaaaatcggctttttaccggataaaattaaactttttgctgactttttaccgg
atttttaccggacaaaaaacaaggaattctgtggtaagatgttattgtcaagaaaataag
aaataggagctggtaattatgaaacatgaaatgactaaatatagcatggacggaaaacga
tatgtatcatcgtggctacaggtaaatatttttggcaaggcattatgctttaatcataaa
tcaatcgcaatttaaaaatatataatttgccgagaaagaggcattgtatcttatcgttgg
tctgatatgagacgcatcatatccaacactcgtggcggaataggtagacgcattggaggt
aagaactaatatggtcaaggagcgtaagccttagcttaagaaacctatagcaaaaattac
ttagttcatgcaaggtgcaaatccttgccgagtgcttttaacgtcaatacctccataccc
ccagggcagatacgttctgatatggagt

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  Functional Coupling


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