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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|272626.9.peg.1282: Listeria innocua Clip11262

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NCBI Taxonomy Id: 272626

Current Assignment: FIG00775219: hypothetical protein
Translate Function Assignments



Context on contig NC_003212 from base 1254037 to 1264922 (10886 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1272 1254037 1254819 783 +           Phage recombination protein Bet locus|lin1242, protein_id|NP_470579.1, gi|16800311, geneID|1129806
1273 1254779 1255516 738 + -41     1: 1   Metallo-beta-lactamase superfamily domain protein in prophage locus|lin1243, protein_id|NP_470580.1, gi|16800312, geneID|1129807
1274 1255528 1256445 918 + 11         Phage replication initiation protein locus|lin1244, protein_id|NP_470581.1, gi|16800313, geneID|1129808
1275 1256576 1257184 609 + 130     1: 2   DNA replication protein DnaC locus|lin1245, protein_id|NP_470582.1, gi|16800314, geneID|1129810
1276 1257362 1257589 228 + 177         FIG00775663: hypothetical protein locus|lin1246, protein_id|NP_470583.1, gi|16800315, geneID|1129811
1277 1257576 1257785 210 + -14         FIG00774865: hypothetical protein locus|lin1247, protein_id|NP_470584.1, gi|16800316, geneID|1129813
1278 1257766 1258203 438 + -20         Phage-encoded crossover junction endodeoxyribonuclease RusA (EC 3.1.22.4) locus|lin1248, protein_id|NP_470585.1, gi|16800317, geneID|1129815
1279 1258225 1258845 621 + 21         FIG00775176: hypothetical protein locus|lin1249, protein_id|NP_470586.1, gi|16800318, geneID|1129816
1280 1258886 1259263 378 + 40         FIG00775670: hypothetical protein locus|lin1250, protein_id|NP_470587.1, gi|16800319, geneID|1129817
1281 1259223 1259399 177 + -41         FIG00774198: hypothetical protein locus|lin1251, protein_id|NP_470588.1, gi|16800320, geneID|1129819
1282 1259411 1259833 423 + 11         FIG00775219: hypothetical protein locus|lin1252, protein_id|NP_470589.1, gi|16800321, geneID|1129820
1283 1259830 1261191 1362 + -4         FIG00776219: hypothetical protein locus|lin1253, protein_id|NP_470590.1, gi|16800322, geneID|1129821
1284 1261204 1261428 225 + 12         hypothetical protein  
1285 1261428 1262372 945 + -1         Phage integrase locus|lin1254, protein_id|NP_470591.1, gi|16800323, geneID|1129822
1286 1262385 1263065 681 + 12         FIG00775669: hypothetical protein locus|lin1255, protein_id|NP_470592.1, gi|16800324, geneID|1129823
1287 1263062 1263355 294 + -4         hypothetical protein locus|lin1256, protein_id|NP_470593.1, gi|16800325, geneID|1129825
1288 1263491 1263643 153 + 135         hypothetical protein  
1289 1264293 1263766 528 - 122         conserved hypothetical protein locus|lin1257, protein_id|NP_470594.1, gi|16800326, geneID|1129826
1290 1264362 1264922 561 + 68         FIG00774160: hypothetical protein locus|lin1258, protein_id|NP_470595.1, gi|16800327, geneID|1129827

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|272626.9.peg.1282 FIG00775219: hypothetical protein
MTTIGMLSIKEQALNKMLTEMNEKHSGAEDAVHNWLCTQEEEAIFEGILKDDRSISGAVK
YCSSRASKHQAEGVAMIDDKTVFSWVKKYFISEKVPKSSVKATVKTTATKPEKAKVKAKE
KPKKTTAQEGYEQLDLLDFL

MD5 = b2c679f84d18cc6991597230c4c31a97


  DNA Sequence

>fig|272626.9.peg.1282 FIG00775219: hypothetical protein
atgacaactattggaatgttaagcataaaagagcaagcactcaataaaatgttaacggaa
atgaatgagaaacactcaggagctgaagatgcagtacataattggctctgtactcaagaa
gaagaagcgatttttgaaggtattctgaaagatgatagaagcattagtggggcggttaaa
tactgctcctcaagggcttcaaagcatcaggctgaaggcgtggccatgattgatgacaaa
acggtcttttcctgggtgaaaaagtattttatatcagaaaaagtgccgaaaagtagtgta
aaggctacagttaaaacaactgcaacaaaaccagaaaaagcgaaggttaaagctaaggaa
aaaccgaaaaaaacaactgcgcaagaagggtatgagcaattagatttgcttgatttctta
tga


  DNA with Flanking Sequence

>fig|272626.9.peg.1282 FIG00775219: hypothetical protein
tcgatttaatggattactatcctgagcagtctgctaaaaaaaagcgaaaggaagaagcct
taaaaccgattaaaacacataaaaacgatagattagattatcctacagcaagagccgaaa
tagagcggattttaggtaagaaagtaactacagtttgcggatattacgatcacccaatta
ataaagaaattcgatggatattcaatttagaaaaaggatgctgctacattaacgataaat
gccatttgtattcaacagaagaaggaaaaggatacaaatatcgcggaaaagtacacgagg
aggttttttataatgcagacgatagaaaaagagctactacaacgattgagtgagagaaga
ataggggttcaacatcagattgcttcacttgtgcatacagagaagtgcacgttgctagaa
gcattaaaaatgacagatacagaagtcgatttgacttttaacgagatgcggatggagtta
gatagttaggaggaaggataatgacaactattggaatgttaagcataaaagagcaagcac
tcaataaaatgttaacggaaatgaatgagaaacactcaggagctgaagatgcagtacata
attggctctgtactcaagaagaagaagcgatttttgaaggtattctgaaagatgatagaa
gcattagtggggcggttaaatactgctcctcaagggcttcaaagcatcaggctgaaggcg
tggccatgattgatgacaaaacggtcttttcctgggtgaaaaagtattttatatcagaaa
aagtgccgaaaagtagtgtaaaggctacagttaaaacaactgcaacaaaaccagaaaaag
cgaaggttaaagctaaggaaaaaccgaaaaaaacaactgcgcaagaagggtatgagcaat
tagatttgcttgatttcttatgaagagagaagcacgaaattatattgataataaattaaa
gccaccaaaagccttttttgactggtgtttctcacaaattccaacttacaaatggtccaa
caaaaaagaaactattctagcttccaatcgaaaaaactgcagtgttattgaacagaagtt
aagaaaaaattctagattgacattttttggtaaattgaacgtgttcggtattgtcttagt
tacatcgaaaagaattgagatacaaagttacgcgttctggaatcgagtagtggaaggaaa
agaaatgattgaatttgatctagtcaattttgaacaatttgctgatggagaacacgtaaa
ggttgccatcagcgacggcaagatgtggtttggtttaattccaatatatggtgggatgtc
tggaggtccttactcaatgattcgattgtttgaaaatgactggaaagaaaaaattcgaag
taaatcagagcttaagtacctagaaataccgcacttagacttt


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
cmr|NT01LI1301 Listeria innocua CLIP 11262     conserved hypothetical protein
cmr|NT01LI1816 Listeria innocua CLIP 11262     conserved hypothetical protein
emb|CAC96483.1 Listeria innocua EMBL   lin1252
emb|CAC96976.1 Listeria innocua EMBL   lin1745
fig|272626.1.peg.1242 Listeria innocua Clip11262 FIG   FIG00775219: hypothetical protein
fig|272626.1.peg.1734 Listeria innocua Clip11262 FIG   FIG00775219: hypothetical protein
fig|272626.9.peg.1787 Listeria innocua Clip11262 FIG   FIG00775219: hypothetical protein
gi|16413726 Listeria innocua NCBI   lin1252
gi|16414232 Listeria innocua NCBI   lin1745
gi|16800321 Listeria innocua Clip11262 NCBI   hypothetical protein lin1252
gi|16800813 Listeria innocua Clip11262 NCBI   hypothetical protein lin1745
img|637223980 Listeria innocua Clip11262 IMG   hypothetical protein
img|637224472 Listeria innocua Clip11262 IMG   hypothetical protein
kegg|lin:lin1252 Listeria innocua CLIP 11262 (serotype 6a) KEGG   hypothetical protein
kegg|lin:lin1745 Listeria innocua CLIP 11262 (serotype 6a) KEGG   hypothetical protein
ref|NP_470589.1 Listeria innocua Clip11262 RefSeq   hypothetical protein lin1252
ref|NP_471081.1 Listeria innocua Clip11262 RefSeq   hypothetical protein lin1745
tr|Q926A2 Listeria innocua TrEMBL   Lin1252 protein


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  Attributes

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  Protein Families

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