Protein Page for fig|264731.4.peg.1906

SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov

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Protein fig|264731.4.peg.1906: Prevotella ruminicola 23

This feature in The SEED Viewer

NCBI Taxonomy Id: 264731

Current Assignment: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)

Translate Function Assignments

Context on contig NC_014033 from base 2356057 to 2370810 (14754 bp)


Fid	Start	End	Size (nt)		Gap	Fc-sc	SS	Function	Aliases
1903	2358270	2356057	2214	-			7: 3 12 14 11 2 5 4	Glutamine synthetase type III, GlnN (EC 6.3.1.2)	gene_name\|glnA_2, locus\|PRU_1957, protein_id\|YP_003575236.1, gi\|294674620, geneID\|9002338
1904	2359270	2358467	804	-	196		6: 13 9 6 15 7 8	Diaminopimelate epimerase (EC 5.1.1.7)	gene_name\|dapF, locus\|PRU_1958, protein_id\|YP_003575237.1, gi\|294674621, geneID\|9000900
1905	2360704	2359295	1410	-	24	19	5: 3 10 2 5 4	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)	gene_name\|gltD, locus\|PRU_1959, protein_id\|YP_003575238.1, gi\|294674622, geneID\|9000283
1906	2365289	2360796	4494	-	91		4: 3 2 5 4	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)	gene_name\|gltA_2, locus\|PRU_1960, protein_id\|YP_003575239.1, gi\|294674623, geneID\|9001491
1907	2365780	2365445	336	-	155		1: 1	hypothetical protein	locus\|PRU_1961, protein_id\|YP_003575240.1, gi\|294674624, geneID\|9000232
1908	2368116	2365843	2274	-	62		1: 1	hypothetical protein	locus\|PRU_1962, protein_id\|YP_003575241.1, gi\|294674625, geneID\|9002411
1909	2368938	2368315	624	-	198			Phage antirepressor protein	locus\|PRU_1963, protein_id\|YP_003575242.1, gi\|294674626, geneID\|9000590
1910	2369953	2369477	477	-	538		1: 1	hypothetical protein
1911	2370810	2370175	636	-	221		1: 1	hypothetical protein	locus\|PRU_1965, protein_id\|YP_003575243.1, gi\|294674627, geneID\|9000565

Annotation History / View All Related Annotations

Help on Annotations

Subsystems in Which This Protein Plays a Role


Subsystem	Curator	Role
Ammonia_assimilation	OlgaZ	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Glutamine,_Glutamate,_Aspartate_and_Asparagine_Biosynthesis	OlgaZ	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
_Glutamate,_Glutamine,_Aspartate,_and_Asparagine_biosynthesis_HGM_New	Kutt_Laura_user	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Glutamate,_Glutamine,_Aspartate,_and_Asparagine_biosynthesis_PanGenomes	Acharya_Geeta_user	Glutamate synthase [NADPH] large chain (EC 1.4.1.13)

Protein Sequence

>fig|264731.4.peg.1906 Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
MTKRKQTQPKKGLYQSDYEHDACGVGMVVNIHGGKSHDLVDNALKVLENMEHRGAETRDK
TGDGAGIMVQIPHEFILLQGIPVPEKGKYGTGLVFLPKDEKAQQQILSVMIEEIEREGLQ
LMHLRTVPTNPEVLGVAAREVEPDIKQIFVTGVSEDNVPVFERILYKVRKRIENRIDDED
FYLCSLSSKNIIYKGMLTSGQLRRYFPDLSNDYFTSGLALVHSRFSTNTFPKWKLAQPFR
LLAHNGEINTIRGNRGWMKARESVLSSEALGDIKDLRPIVQDGMSDSASLDNVFEFLMMS
GLSLPQAMAILVPESFNDKNPISEDLKAFYEYHSILMEPWDGPAALLFSDGRYAGGMLDR
NGLRPSRYTITKQGMMVVASEVGVMDFEPGDVVSKGRLQPGKILLIDTQEGKIYYDGEIK
EKLAKAHPYREWLAENRVQLEKLKSGRKVDNGVSDLQQKLVTFGFGQEDIDKTIIPMATA
GQEPVAAMGNDTPLAVISDRPQVLFNYFRQQFAQVTNPAIDPIREELVMSLTEYIGAVGT
NILTPDASNCKMVRLPQPVLTNTQLDILCNIRYKGFNTKKLPIVFEMAKGEEGLRQALDD
LCHQAEASVDEGVNYIILSDRDLDDTHAAIPSLLAVSAVHHYLISVGKRVQTALIVESGE
IREVMHAALLLGYGASALCPYMTFAVLDDLVKHHKIQEEYATAEKNYIKAVDKGLKKIMS
KMGISTIRSYRGAKIFESIGLSEDLLRRYFGTEVSTIGGVGLKEIARDAIALHEAAKEQT
LLQNQGQFAWRKDGIKHAWNPETIAKLQLATRQGNYEKFKQWSKLVDEKESPIFIRDFFG
FKKAAKPTPIDEVESVESIVKHFVTGAMSFGALSIEAHEALALAMNKLGARSNTGEGGED
NARYHSEVDGVSLSSKTKQIASGRFGVTAEYLVNAEEIQIKVAQGAKPGEGGQLPGFKVN
EIIAKTRNAIPGISLISPPPHHDIYSIEDLAQLIFDLKNINPTAAVSVKLVAESGVGTIA
AGVAKAKADLIVISGAEGGTGASPASSMRFAGISPEIGLAETQQTLVMNGLRNQVRLQTD
GQLKTAKDVIIMAMLGADEFSFGTLPLIVLGCVMMRKCNTNTCPMGVATQNPELRKHFEG
RAEYVVNFFTFLAEQVREYLSEIGVKSLKEIIGHTELIEVNTENATDKQKTIDFARLLHK
PATDKALYWDRGAYTKVTGVKDEEMIKAAQKAIENQEEVTLDYAIKNTDRAVGTMLSGVI
AQKYGEEGLPDGTIKIKFKGSAGQSFGAFAVKGLDLRLEGETNDYFGKGLSGGRISILPP
ARRSDDFKAEENIIAGNTGLYGATSGELYINGKVGERFGVRNSGAIAVIEGAGDHCCEYM
TGGRVVVLGKTGRNFAAGMSGGVAYVYDPDHTFDYFCNMDMVELSLVEDSVSRKELLELI
REHYLHTGSALAGRMLDDWHRYIEDFIQVVPIEYKRVLEEEKMARLHEKIADIQRDY

MD5 = c0233dfc0209d30b5fbe44ad186d9227

DNA Sequence

>fig|264731.4.peg.1906 Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
atgacaaaaagaaagcaaactcaacccaaaaaaggactctaccaatctgactatgagcat
gatgcttgcggcgtgggtatggtggttaacatacacggcggaaaaagtcatgatctggtt
gacaatgcactgaaggtgcttgagaacatggaacaccgtggcgccgagacacgcgacaag
accggtgatggtgcgggtatcatggtacagataccccacgagtttattttgttacagggt
atccccgtgcccgaaaagggtaagtacggcactggtctggtttttctgcctaaggacgag
aaggcccagcagcagattctgagcgtgatgattgaggagattgagcgcgagggcctgcag
ctgatgcacctgcgtacggtgcccaccaaccccgaggtgctgggtgtggctgcccgcgag
gtggaacccgacattaagcagatatttgtaacgggcgtgtcggaggataacgtgcccgtg
tttgagcgtatattatataaggtacgcaagcgcattgagaaccgcattgatgatgaggac
ttctacttgtgctcgctatcaagcaagaatattatctacaaggggatgcttaccagcgga
cagctgcgtcgctatttccctgatctttcgaacgattactttacgagcggactggccttg
gttcactcgcgtttctcgactaatacattcccaaaatggaagctggcacagcctttccgt
ctgctggcccacaacggtgagattaacaccattcgtggtaaccgcggctggatgaaggca
agagagagtgtgctgagcagcgaggcgctgggcgatatcaaggacttgcgcccgattgtg
caggacggcatgagcgactcggccagcttggacaacgtattcgagttcctgatgatgagc
ggactctcgttgccacaggccatggccatcctggtgcccgagagctttaacgataagaac
cctatttcagaagatttgaaagccttctacgaatatcactctatcctgatggagccgtgg
gacggtcctgccgcactgctgtttagcgatggtcgctacgcaggcggtatgctggaccgc
aacggactgcgccccagccgctacaccatcaccaagcaaggtatgatggtggtagcctct
gaggttggcgtgatggactttgagcccggcgacgtggtttcgaagggacgcctgcagcca
ggaaagattctgctgattgatacgcaggaaggcaagatttactacgatggcgagattaag
gagaagctggccaaggcgcatccttaccgcgagtggctggccgagaaccgcgtgcagctt
gagaaactgaagagcggacgtaaggtggataacggtgtgagcgacttgcagcagaagctg
gttaccttcggattcggtcaggaggatatcgacaagacgattatccctatggccacagcc
ggacaggagcctgtagctgccatgggtaacgacacaccgctggccgttatcagcgaccgt
ccacaggtgctgttcaactacttccgtcagcagtttgcacaggttaccaaccctgccatc
gaccctatccgcgaggaactggtgatgagtctaaccgagtatatcggcgctgtaggcacc
aacattctgacacccgacgcatctaactgtaagatggtgcgcctgccgcaaccagtttta
accaacacacaacttgatatactttgtaacatccgctacaagggcttcaacaccaagaag
ttgcctatcgtgtttgagatggccaagggtgaggaaggcttgcgccaggctctggacgac
ctgtgccaccaggccgaagccagtgtagatgagggtgtgaactacattatcctgagcgac
cgcgacctggacgatacccatgccgccatcccatcgctgttggccgttagtgctgttcac
cactacctgattagcgtaggtaagcgtgtgcagacagctctgattgttgagagcggtgag
attcgcgaggtaatgcacgcagccctgctgctgggttacggagccagcgccctgtgccca
tacatgacgtttgcggtactcgacgatctggtgaagcaccacaagattcaggaggagtac
gccaccgccgagaagaactacatcaaggccgtggacaagggtctgaagaagattatgagt
aagatgggtatcagcaccatccgcagctaccgcggtgccaagatctttgagagcatcgga
ctgagcgaggatctgctgcgccgctacttcggtaccgaggtgagcaccattggtggtgta
ggcctgaaggagatagcccgtgatgccattgcgctgcacgaggctgccaaggagcagaca
ctgctgcagaaccagggccagtttgcatggcgtaaggatggtattaagcacgcctggaac
cccgagaccatcgctaagctgcagttggctacccgtcagggtaactacgaaaagttcaag
cagtggtcgaagctggtggatgagaaggagagccccatctttatccgcgacttcttcgga
ttcaagaaggctgctaagccaaccccaatcgacgaggttgagagcgtagaaagcattgtt
aagcattttgttacaggtgctatgagtttcggtgccctgagcatcgaggcccacgaggca
ctggcactggccatgaacaagctgggcgcccgcagtaacaccggtgagggtggtgaggac
aacgcccgctaccactcggaggttgacggtgtaagcttgagctcgaagaccaagcagatt
gccagtggacgtttcggtgtaaccgccgagtacctggtgaatgccgaggagatacagatt
aaggtggcacaaggagcaaaacctggtgagggcggacagctgcctggctttaaggttaac
gagattatcgccaagacacgtaacgccatccccggtatctcgctcatctcgcctccacca
catcacgatatctacagtatcgaggacctggcacagcttatcttcgacctgaagaatatc
aaccccacagctgccgtcagcgtaaaactggtggccgagagcggtgtaggaaccattgcc
gctggtgtggcaaaggccaaggccgatctgattgttatcagtggtgccgagggtggtaca
ggtgccagccctgcttcaagtatgcgatttgcaggtattagtcctgagatcggactggcc
gagacccagcagacactggtgatgaacggcctgcgtaaccaggttcgcctgcagaccgac
ggacagctgaagactgccaaggacgtgataatcatggctatgcttggtgccgacgagttc
tcgttcggaacactgcccctgattgttctgggctgtgtgatgatgcgtaagtgtaatacc
aatacctgccccatgggtgtggctacccagaaccccgagctgcgtaagcattttgagggt
agagccgagtacgtggttaacttctttaccttcctggccgagcaggtgcgcgaatacctg
agtgaaatcggcgtgaagagtctgaaggagattatcggacacaccgaactgattgaggtg
aacaccgagaacgctaccgacaagcagaagaccatcgactttgcacgcttgctgcacaag
cctgcaaccgacaaggctctgtactgggatcgcggtgcctacaccaaggtgacaggcgtg
aaggacgaggagatgattaaggctgcacagaaggccatcgagaaccaggaagaggtaaca
ctcgactatgccatcaagaataccgaccgtgccgtgggtaccatgctgagtggtgtgatt
gcccagaagtacggcgaggaaggactgcccgacggaactatcaaaattaagttcaagggc
tcggctggtcagagtttcggtgcctttgccgtgaagggactggatttgcgcctcgagggt
gagaccaacgactactttggtaagggcctttcgggtggtcgcatctctattctgcctcca
gctcgccgcagcgacgactttaaggctgaagaaaatattatcgcaggtaacaccggactt
tacggtgctacatcgggcgaactctatataaatggtaaggtaggcgagcgcttcggagtg
cgtaactcgggtgccatcgctgtgattgaaggtgccggcgaccactgctgcgagtacatg
actggcggacgtgtggtagtgctgggtaagacaggccgaaactttgctgccggtatgagt
ggtggcgtggcctatgtttacgaccccgatcacacattcgactacttctgcaacatggat
atggttgaactctcgctggttgaggacagcgtatcgcgcaaagaactgttggagctgatt
cgtgagcactatctgcacacaggctcggccctggcaggacgtatgctcgacgactggcac
cgctacatcgaggactttatccaggttgtgcctatcgagtacaaacgcgtgctcgaagaa
gagaagatggcgcgcctgcacgagaagattgccgacatccagcgcgactattag

DNA with Flanking Sequence

>fig|264731.4.peg.1906 Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
gaatgttttgtgcagctctggcgcaagctggagcgcacaaggcgcctgctgggcgggcag
tgcaagcgcttctgcatacgtaacgtgctgaaagcatggttcggtgctgcggccaacgat
gatatgatatggcacgtgtgccatctgtgcgagcaggagggctggaacgagctgcctctg
cccaatctctatccgcgcaagcatcgcgagctgctgcgtgccatcgtggccgtaagcacc
ggcatcagcttctggcgcatcgatctgaaggcgctcgacagtgcctatagcgtagccttt
ccgcatagcacaccgttaaatgttaataagaaaaagaaaaattagtttcaatctgtaagc
atttcaatgcgatttgcttacagattgttattttcgacaaaaatgtagataaaaacgtca
gcgtttcggcttgtttgatagcaaaacgttatacctttgcggtcgaaatcggacaaaatg
taagattaacaaaggataatatgacaaaaagaaagcaaactcaacccaaaaaaggactct
accaatctgactatgagcatgatgcttgcggcgtgggtatggtggttaacatacacggcg
gaaaaagtcatgatctggttgacaatgcactgaaggtgcttgagaacatggaacaccgtg
gcgccgagacacgcgacaagaccggtgatggtgcgggtatcatggtacagataccccacg
agtttattttgttacagggtatccccgtgcccgaaaagggtaagtacggcactggtctgg
tttttctgcctaaggacgagaaggcccagcagcagattctgagcgtgatgattgaggaga
ttgagcgcgagggcctgcagctgatgcacctgcgtacggtgcccaccaaccccgaggtgc
tgggtgtggctgcccgcgaggtggaacccgacattaagcagatatttgtaacgggcgtgt
cggaggataacgtgcccgtgtttgagcgtatattatataaggtacgcaagcgcattgaga
accgcattgatgatgaggacttctacttgtgctcgctatcaagcaagaatattatctaca
aggggatgcttaccagcggacagctgcgtcgctatttccctgatctttcgaacgattact
ttacgagcggactggccttggttcactcgcgtttctcgactaatacattcccaaaatgga
agctggcacagcctttccgtctgctggcccacaacggtgagattaacaccattcgtggta
accgcggctggatgaaggcaagagagagtgtgctgagcagcgaggcgctgggcgatatca
aggacttgcgcccgattgtgcaggacggcatgagcgactcggccagcttggacaacgtat
tcgagttcctgatgatgagcggactctcgttgccacaggccatggccatcctggtgcccg
agagctttaacgataagaaccctatttcagaagatttgaaagccttctacgaatatcact
ctatcctgatggagccgtgggacggtcctgccgcactgctgtttagcgatggtcgctacg
caggcggtatgctggaccgcaacggactgcgccccagccgctacaccatcaccaagcaag
gtatgatggtggtagcctctgaggttggcgtgatggactttgagcccggcgacgtggttt
cgaagggacgcctgcagccaggaaagattctgctgattgatacgcaggaaggcaagattt
actacgatggcgagattaaggagaagctggccaaggcgcatccttaccgcgagtggctgg
ccgagaaccgcgtgcagcttgagaaactgaagagcggacgtaaggtggataacggtgtga
gcgacttgcagcagaagctggttaccttcggattcggtcaggaggatatcgacaagacga
ttatccctatggccacagccggacaggagcctgtagctgccatgggtaacgacacaccgc
tggccgttatcagcgaccgtccacaggtgctgttcaactacttccgtcagcagtttgcac
aggttaccaaccctgccatcgaccctatccgcgaggaactggtgatgagtctaaccgagt
atatcggcgctgtaggcaccaacattctgacacccgacgcatctaactgtaagatggtgc
gcctgccgcaaccagttttaaccaacacacaacttgatatactttgtaacatccgctaca
agggcttcaacaccaagaagttgcctatcgtgtttgagatggccaagggtgaggaaggct
tgcgccaggctctggacgacctgtgccaccaggccgaagccagtgtagatgagggtgtga
actacattatcctgagcgaccgcgacctggacgatacccatgccgccatcccatcgctgt
tggccgttagtgctgttcaccactacctgattagcgtaggtaagcgtgtgcagacagctc
tgattgttgagagcggtgagattcgcgaggtaatgcacgcagccctgctgctgggttacg
gagccagcgccctgtgcccatacatgacgtttgcggtactcgacgatctggtgaagcacc
acaagattcaggaggagtacgccaccgccgagaagaactacatcaaggccgtggacaagg
gtctgaagaagattatgagtaagatgggtatcagcaccatccgcagctaccgcggtgcca
agatctttgagagcatcggactgagcgaggatctgctgcgccgctacttcggtaccgagg
tgagcaccattggtggtgtaggcctgaaggagatagcccgtgatgccattgcgctgcacg
aggctgccaaggagcagacactgctgcagaaccagggccagtttgcatggcgtaaggatg
gtattaagcacgcctggaaccccgagaccatcgctaagctgcagttggctacccgtcagg
gtaactacgaaaagttcaagcagtggtcgaagctggtggatgagaaggagagccccatct
ttatccgcgacttcttcggattcaagaaggctgctaagccaaccccaatcgacgaggttg
agagcgtagaaagcattgttaagcattttgttacaggtgctatgagtttcggtgccctga
gcatcgaggcccacgaggcactggcactggccatgaacaagctgggcgcccgcagtaaca
ccggtgagggtggtgaggacaacgcccgctaccactcggaggttgacggtgtaagcttga
gctcgaagaccaagcagattgccagtggacgtttcggtgtaaccgccgagtacctggtga
atgccgaggagatacagattaaggtggcacaaggagcaaaacctggtgagggcggacagc
tgcctggctttaaggttaacgagattatcgccaagacacgtaacgccatccccggtatct
cgctcatctcgcctccaccacatcacgatatctacagtatcgaggacctggcacagctta
tcttcgacctgaagaatatcaaccccacagctgccgtcagcgtaaaactggtggccgaga
gcggtgtaggaaccattgccgctggtgtggcaaaggccaaggccgatctgattgttatca
gtggtgccgagggtggtacaggtgccagccctgcttcaagtatgcgatttgcaggtatta
gtcctgagatcggactggccgagacccagcagacactggtgatgaacggcctgcgtaacc
aggttcgcctgcagaccgacggacagctgaagactgccaaggacgtgataatcatggcta
tgcttggtgccgacgagttctcgttcggaacactgcccctgattgttctgggctgtgtga
tgatgcgtaagtgtaataccaatacctgccccatgggtgtggctacccagaaccccgagc
tgcgtaagcattttgagggtagagccgagtacgtggttaacttctttaccttcctggccg
agcaggtgcgcgaatacctgagtgaaatcggcgtgaagagtctgaaggagattatcggac
acaccgaactgattgaggtgaacaccgagaacgctaccgacaagcagaagaccatcgact
ttgcacgcttgctgcacaagcctgcaaccgacaaggctctgtactgggatcgcggtgcct
acaccaaggtgacaggcgtgaaggacgaggagatgattaaggctgcacagaaggccatcg
agaaccaggaagaggtaacactcgactatgccatcaagaataccgaccgtgccgtgggta
ccatgctgagtggtgtgattgcccagaagtacggcgaggaaggactgcccgacggaacta
tcaaaattaagttcaagggctcggctggtcagagtttcggtgcctttgccgtgaagggac
tggatttgcgcctcgagggtgagaccaacgactactttggtaagggcctttcgggtggtc
gcatctctattctgcctccagctcgccgcagcgacgactttaaggctgaagaaaatatta
tcgcaggtaacaccggactttacggtgctacatcgggcgaactctatataaatggtaagg
taggcgagcgcttcggagtgcgtaactcgggtgccatcgctgtgattgaaggtgccggcg
accactgctgcgagtacatgactggcggacgtgtggtagtgctgggtaagacaggccgaa
actttgctgccggtatgagtggtggcgtggcctatgtttacgaccccgatcacacattcg
actacttctgcaacatggatatggttgaactctcgctggttgaggacagcgtatcgcgca
aagaactgttggagctgattcgtgagcactatctgcacacaggctcggccctggcaggac
gtatgctcgacgactggcaccgctacatcgaggactttatccaggttgtgcctatcgagt
acaaacgcgtgctcgaagaagagaagatggcgcgcctgcacgagaagattgccgacatcc
agcgcgactattagtaaaatgtaaaaattagaaaatgtaataatgtaaaagttgtcgcat
ttcatttttaaatttttaaattcttaaatttttaaattttacacaatgggaaatccaaaa
gcatttttagagatacaccgccaggaggcgggttaccgtccgattcacgatagaatccac
gattttggcgaggtagagcagacgctcagcactcgcgaacgcaaactgcaggccagccgc
tgtatggattgcggcgtgcccttctgccactgggcctgtccgctgggcaacaaagcaccc
gagtggaacgacgccctgtacaaaggcgactttgagttggcctatcagttgctgaacacc
accaaccccttccccgagttcacaggtcgtatctgtcctgcactgtgcgagaaggcttgc
gtgctgaaccgctttaaccacgagccaaccaccaaccgtgaggacgaggctgccatcacc
gagatggcatttcaggagggctttatccagccta

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  Functional Coupling


Score	Peg	Function
19	fig\|264731.4.peg.1905	Glutamate synthase [NADPH] small chain (EC 1.4.1.13)

Attributes

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