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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|216591.1.peg.7776: Burkholderia cenocepacia J2315

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NCBI Taxonomy Id: 216591

Current Assignment:
Translate Function Assignments



Context on contig Bcep157f02.p2kA148 from base 311021 to 321117 (10097 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1890 311021 311347 327 +       1: 1   hypothetical protein  
1891 311659 311378 282 - 30            
1892 311773 312675 903 + 113     1: 2   COG1801: Uncharacterized conserved protein  
1893 313431 312721 711 - 45            
1894 313485 314123 639 + 53     1: 1   hypothetical protein  
1895 314522 314157 366 - 33            
1896 315485 314688 798 - 165         Antirepressor  
7776 316282 315800 483 - 314          
1897 316527 316270 258 - -13            
1898 317889 316687 1203 - 159     3: 21 18 19   DNA primase (EC 2.7.7.-)  
1899 318162 318350 189 + 272            
1900 318743 318351 393 - 0            
1901 318773 319153 381 + 29            
1902 319359 319937 579 + 205            
1903 320053 320388 336 + 115            
1904 320473 321117 645 + 84     16: 12 4 15 9 6 3 10 14 13 20 11 5 17 16 8 7 ff
idu(3)
idu(3)
idu(3)
GTP cyclohydrolase II (EC 3.5.4.25)  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|216591.1.peg.7776 
MRKLIKEIPMTEKKARGRQIHVEMPSDEYDLFKALAKEQDLSLQQLVRRCIRAYIEQGSA
YQDTHPNLKIVPEEIFTPDYADDLLSDGTHGTIMKTTEFESAIARLLRMTSLNRTALIHD
LQYAKLVDTVTVTHLNLEPGTAGNTLEISVTAHRDLKEQQ

MD5 = 6883981bc63bd700860369ba96135d0d


  DNA Sequence

>fig|216591.1.peg.7776 
gtgcggaaattaattaaggaaattcccatgacagagaagaaagcacggggccgacagatt
catgtcgaaatgccctccgacgaatacgacttgttcaaggcgctcgcgaaggaacaggat
ttgtcgctacagcaacttgtccgtcgatgcatccgggcatacatagagcaaggcagcgcc
tatcaagatacacatccgaatctgaagattgttccagaggaaattttcacacccgattac
gcggacgatcttttatccgacggtacgcacggaacaataatgaagaccactgaatttgaa
tcagcaatcgcgcgactgctgcgaatgacaagcttgaatcgcacggctcttatccatgat
cttcaatatgcgaagttggtcgatactgtaaccgtaactcatttgaatttagaacccgga
acggccggtaatacgttagaaatttcggtgaccgcccaccgcgacttgaaggaacaacaa
tga


  DNA with Flanking Sequence

>fig|216591.1.peg.7776 
gtcattctgaagaagctgaccggcaaggatgcccgcaagtctaacaaccgtagagtgttc
gcacttcccccaacgcgcggcgggtccggattctaagcgcgtgcgggcagcgtaaaagca
aacagggaccagcgtggtccctgctaaaaaacgctggtccctgcctcaaagccttatcca
gcaagggtttccggctaaaagggaccaagggaccaagaaaaaaaagaaaaatgggggcag
taaaaagcagactagatgcaggtctgtattccactgcctaccctatatataggaaatgct
ggtccctctggtccctcattcccggaaatccttatccagcaagggtttcagcagggacaa
ggctggtccctgcctgaatcgctggtccctgcgccctgtctgccgtcgtgcacagaaaaa
tattttctgccaatcctcgctttccactccgaaatcctcaattttaggagtgagacgata
aagcacgcagtaaatagcgtgtgcggaaattaattaaggaaattcccatgacagagaaga
aagcacggggccgacagattcatgtcgaaatgccctccgacgaatacgacttgttcaagg
cgctcgcgaaggaacaggatttgtcgctacagcaacttgtccgtcgatgcatccgggcat
acatagagcaaggcagcgcctatcaagatacacatccgaatctgaagattgttccagagg
aaattttcacacccgattacgcggacgatcttttatccgacggtacgcacggaacaataa
tgaagaccactgaatttgaatcagcaatcgcgcgactgctgcgaatgacaagcttgaatc
gcacggctcttatccatgatcttcaatatgcgaagttggtcgatactgtaaccgtaactc
atttgaatttagaacccggaacggccggtaatacgttagaaatttcggtgaccgcccacc
gcgacttgaaggaacaacaatgacgctggcagaactcgaagccctacacacgaaacagct
tggaattctgtcaacgcggggattacgaaattcactcgttaccgtatctcagatgatgga
tacatggatagagatacaacgcttgcgcgttgagccgatttatcgacctcggagaaaaca
atgattaaacgactgcatgctcatccggtcggcaatctcgcgctatccgtcgtgatcgcc
gccaccctgctcgcctcaattattgcgtgcctgccaaacctgcactaacgtgcacttaga
tttacagactcacaaattatcttagtgaagcaaaattatgaacaatggcctactttcatt
cgatcacgatggcgcaaccattcgcacactaactgtggaaggcgaaccatattttgtagc
ccgcgatgttgccgaaatactcggttactccaactaccgcgatgcgattgcacgtcattg
taagggcgtcgtgaaacacgacacccctaccgtgggaggaatg


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
emb|CAR55737.1 Burkholderia cenocepacia J2315 EMBL   putative phage repressor protein
gi|198039766 Burkholderia cenocepacia J2315 NCBI   putative phage repressor protein
gi|206563726 Burkholderia cenocepacia J2315 NCBI   putative phage repressor protein
kegg|bcj:BCAM1878 Burkholderia cenocepacia J2315 KEGG   putative phage repressor protein
ref|YP_002234489.1 Burkholderia cenocepacia J2315 RefSeq   putative phage repressor protein
tr|B4EME1   TrEMBL   Putative phage repressor protein


  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

Help on Attributes

Key
Link Explains Key
Value
isoelectric_point 6.24
molecular_weight 18248
PFAM::PF01402 0.0;19-57
PSORT::Cytoplasmic 8.96
PSORT_score::Cytoplasmic 8.96
similar_to_human no


  Protein Families

No protein families found

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