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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|216591.1.peg.1897: Burkholderia cenocepacia J2315

This feature in The SEED Viewer

NCBI Taxonomy Id: 216591

Current Assignment:
Translate Function Assignments


Context on contig Bcep157f02.p2kA148 from base 311021 to 321818 (10798 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
1890 311021 311347 327 +       1: 1   hypothetical protein  
1891 311659 311378 282 - 30            
1892 311773 312675 903 + 113     1: 2   COG1801: Uncharacterized conserved protein  
1893 313431 312721 711 - 45            
1894 313485 314123 639 + 53     1: 1   hypothetical protein  
1895 314522 314157 366 - 33            
1896 315485 314688 798 - 165         Antirepressor  
7776 316282 315800 483 - 314            
1897 316527 316270 258 - -13          
1898 317889 316687 1203 - 159     3: 22 19 20   DNA primase (EC 2.7.7.-)  
1899 318162 318350 189 + 272            
1900 318743 318351 393 - 0            
1901 318773 319153 381 + 29            
1902 319359 319937 579 + 205            
1903 320053 320388 336 + 115            
1904 320473 321117 645 + 84     16: 13 4 16 10 6 3 11 15 14 21 12 5 18 17 9 8 ff
idu(3)
idu(3)
idu(3)		 GTP cyclohydrolase II (EC 3.5.4.25)  
1905 321818 321399 420 - 281     1: 7 ff
ilit(7959018)
ilit(8370677)
isu		 Prolyl endopeptidase (EC 3.4.21.26)  

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|216591.1.peg.1897 
MQVCIPLPTLYIGNAGPSGPSFPEILIQQGFQQGQGWSLPESLVPAPCLPSCTEKYFLPI
LAFHSEILNFRSETIKHAVNSVCGN

MD5 = 26aebbc4a546d4eea9358a76aedc3724


  DNA Sequence

>fig|216591.1.peg.1897 
atgcaggtctgtattccactgcctaccctatatataggaaatgctggtccctctggtccc
tcattcccggaaatccttatccagcaagggtttcagcagggacaaggctggtccctgcct
gaatcgctggtccctgcgccctgtctgccgtcgtgcacagaaaaatattttctgccaatc
ctcgctttccactccgaaatcctcaattttaggagtgagacgataaagcacgcagtaaat
agcgtgtgcggaaattaa


  DNA with Flanking Sequence

>fig|216591.1.peg.1897 
ttcaacagctttgggccgaagtcgcaacgctatttgatgcaggcgaacgctggtggttgg
agcgcgacgaagaacggaagcttgccgaagtcaacgcggaacacgaaaacgttgatccgc
tggaagaattgattctgtcccggttcgattggaacgtggcaggcgcagcgcgagcaatga
cggcgacagaggttctaatcgaagttggcatgcctccgagcaaaacactgagcacgcaat
gcagtgtcattctgaagaagctgaccggcaaggatgcccgcaagtctaacaaccgtagag
tgttcgcacttcccccaacgcgcggcgggtccggattctaagcgcgtgcgggcagcgtaa
aagcaaacagggaccagcgtggtccctgctaaaaaacgctggtccctgcctcaaagcctt
atccagcaagggtttccggctaaaagggaccaagggaccaagaaaaaaaagaaaaatggg
ggcagtaaaaagcagactagatgcaggtctgtattccactgcctaccctatatataggaa
atgctggtccctctggtccctcattcccggaaatccttatccagcaagggtttcagcagg
gacaaggctggtccctgcctgaatcgctggtccctgcgccctgtctgccgtcgtgcacag
aaaaatattttctgccaatcctcgctttccactccgaaatcctcaattttaggagtgaga
cgataaagcacgcagtaaatagcgtgtgcggaaattaattaaggaaattcccatgacaga
gaagaaagcacggggccgacagattcatgtcgaaatgccctccgacgaatacgacttgtt
caaggcgctcgcgaaggaacaggatttgtcgctacagcaacttgtccgtcgatgcatccg
ggcatacatagagcaaggcagcgcctatcaagatacacatccgaatctgaagattgttcc
agaggaaattttcacacccgattacgcggacgatcttttatccgacggtacgcacggaac
aataatgaagaccactgaatttgaatcagcaatcgcgcgactgctgcgaatgacaagctt
gaatcgcacggctcttatccatgatcttcaatatgcgaagttggtcgatactgtaaccgt
aactcatttgaatttagaacccggaacggccggtaatacgttagaaatttcggtgaccgc
ccaccgcgacttgaaggaacaacaatgacgctggcagaactcgaagccctacacacga


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

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  Attributes

Help on Attributes

Key
Link Explains Key		 Value
isoelectric_point 5.52
molecular_weight 9230
PSORT::unknown unknown
similar_to_human no


  Protein Families

No protein families found

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