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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|216591.1.peg.1894: Burkholderia cenocepacia J2315

This feature in The SEED Viewer

NCBI Taxonomy Id: 216591

Current Assignment: hypothetical protein
Translate Function Assignments



Context on contig Bcep157f02.p2kA148 from base 307976 to 319153 (11178 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1886 308641 307976 666 -           putative TerS  
1887 309488 308832 657 - 190            
1888 309932 309543 390 - 54            
1889 310783 310202 582 - 269         HNH endonuclease  
1890 311021 311347 327 + 237     1: 1   hypothetical protein  
1891 311659 311378 282 - 30            
1892 311773 312675 903 + 113     1: 4   COG1801: Uncharacterized conserved protein  
1893 313431 312721 711 - 45            
1894 313485 314123 639 + 53     1: 1   hypothetical protein  
1895 314522 314157 366 - 33            
1896 315485 314688 798 - 165         Antirepressor  
7776 316282 315800 483 - 314            
1897 316527 316270 258 - -13            
1898 317889 316687 1203 - 159     3: 5 2 3   DNA primase (EC 2.7.7.-)  
1899 318162 318350 189 + 272            
1900 318743 318351 393 - 0            
1901 318773 319153 381 + 29            

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

Subsystem Curator Role
CBSS-227321.4.peg.3751 OlgaV hypothetical protein


  Protein Sequence

>fig|216591.1.peg.1894 hypothetical protein
MEFQWFPGMAKSQAQKSIDSLHQTAKERLHVDRVLEISSKSKDEYGVKLSAFNLMIKTPR
REYSLECAYQASKVFERGGPFTDLLNAKSIDAKRDPRLTQFGRMIRFQWYGKEWPLQPRT
AFYDWLYINALHRQPELAKIVLTYRAFSDIAFNPERSINCQAYAAALYVSLHERGLLRDE
ILKDQDEYLRVINTGAVSNAHENTLRNRSLLD

MD5 = 4f437d676f09ed5d4d1f128ef7ffaff9


  DNA Sequence

>fig|216591.1.peg.1894 hypothetical protein
gtggagttccaatggtttcccggcatggcaaagagccaagctcagaagtcaatcgattcg
ctccaccagacggcgaaggagcgactgcacgtcgatagagtgttagagatttccagcaag
tccaaggatgagtatggcgtcaagttgagcgcgttcaatctgatgataaagacgccacgc
cgggaatacagtcttgagtgcgcctatcaagcgagcaaagtatttgagcgcggaggccca
tttacggaccttctcaatgccaagtcaattgacgcaaagcgcgatcctcgccttacacaa
tttggcaggatgattagatttcaatggtatggcaaagaatggccgcttcaaccccggacg
gcgttctatgattggttgtacatcaacgctctgcataggcaaccagaacttgccaagatt
gttttgacttatcgcgcattctctgacattgcgtttaatcctgagcgctcgattaactgt
caggcgtacgcggctgctctctacgtgtcactgcatgagcgtggactgttacgagacgaa
attctgaaagatcaggatgagtatcttcgcgtgatcaacacaggtgcggtaagtaacgcc
catgaaaacacactcagaaacaggtcgttgctcgattag


  DNA with Flanking Sequence

>fig|216591.1.peg.1894 hypothetical protein
tttccgaactacagaatgttctaccgttatcgccaagaaaatcggggcgagaattgggta
gtcgtcggaattgacccatccgcgctttggaaattgcgatgtgcgttttgcattacaaat
gcggcggcaggcagggtatcggctatccccctcgaccagcgaaccgggttgcctgcgttc
caagccatgtatggggactttgatgataaagtccgcgcgaacctgcatcttgcagaccag
tttccgaccaacccacaggcggaggtattgatgttggacggcgttccagcggcgtacttc
ttgggggtcgccgtacaaaacgacatgatgaaagctcaagttgaggcattgcatccgggt
cttcacgtggtgcggcatgaagagttctattcggcccgtagcgactacgctcactggaag
ccacagcaggcatagacatggcaacacgcccgatatttatcccgtcccttagtggcccct
tgctcgtctcgacggagcttgtggagttccaatggtttcccggcatggcaaagagccaag
ctcagaagtcaatcgattcgctccaccagacggcgaaggagcgactgcacgtcgatagag
tgttagagatttccagcaagtccaaggatgagtatggcgtcaagttgagcgcgttcaatc
tgatgataaagacgccacgccgggaatacagtcttgagtgcgcctatcaagcgagcaaag
tatttgagcgcggaggcccatttacggaccttctcaatgccaagtcaattgacgcaaagc
gcgatcctcgccttacacaatttggcaggatgattagatttcaatggtatggcaaagaat
ggccgcttcaaccccggacggcgttctatgattggttgtacatcaacgctctgcataggc
aaccagaacttgccaagattgttttgacttatcgcgcattctctgacattgcgtttaatc
ctgagcgctcgattaactgtcaggcgtacgcggctgctctctacgtgtcactgcatgagc
gtggactgttacgagacgaaattctgaaagatcaggatgagtatcttcgcgtgatcaaca
caggtgcggtaagtaacgcccatgaaaacacactcagaaacaggtcgttgctcgattaga
ttaatttgcggggaagggtgcctttagcatccttattcatagattgttttctgcgcgacc
attgttaggttcgtgagcgttcgcacaatctccgcctctgttcgatagtcgcccacctct
ccggagacttcgagcatgttagacagacggcgcacggcgtcccgaagcattgagggcgtc
gcattgcccgtcatcatgctccgatgtagattaaaggacgggccgtcttggaagctcttg
aaactgtcccggagcgcgtccgtacgcaattcgttgtcatcggatacaggatcggttgca
agcgggaggtcgtcccattctggcgcgtcggggaggatggcgtaaaaggatgtttcgtta
atcatgggaatgtctctatgagttttgagtctgttcatctaattatgtgaatctatctga
ggcgttcggaacatgtgcgcattattgcgaatacttccgagctagtaagttgctggataa
gtcggcgcagcttttccgt


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function


  Attributes

Help on Attributes

Key
Link Explains Key
Value
isoelectric_point 9.44
molecular_weight 24725
PSORT::unknown unknown
similar_to_human no


  Protein Families

No protein families found

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