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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|216591.1.peg.1893: Burkholderia cenocepacia J2315

This feature in The SEED Viewer

NCBI Taxonomy Id: 216591

Current Assignment:
Translate Function Assignments


Context on contig Bcep157f02.p2kA148 from base 306691 to 318743 (12053 bp)

Fid Start End Size
(nt)		   Gap Find
best
clusters		 Pins Fc-sc SS Ev Function Aliases
1885 308010 306691 1320 -           FIG00467626: hypothetical protein  
1886 308641 307976 666 - -35         putative TerS  
1887 309488 308832 657 - 190            
1888 309932 309543 390 - 54            
1889 310783 310202 582 - 269         HNH endonuclease  
1890 311021 311347 327 + 237     1: 1   hypothetical protein  
1891 311659 311378 282 - 30            
1892 311773 312675 903 + 113     1: 2   COG1801: Uncharacterized conserved protein  
1893 313431 312721 711 - 45          
1894 313485 314123 639 + 53     1: 1   hypothetical protein  
1895 314522 314157 366 - 33            
1896 315485 314688 798 - 165         Antirepressor  
7776 316282 315800 483 - 314            
1897 316527 316270 258 - -13            
1898 317889 316687 1203 - 159     3: 5 3 4   DNA primase (EC 2.7.7.-)  
1899 318162 318350 189 + 272            
1900 318743 318351 393 - 0            

Annotation History   /   View All Related Annotations Help on Annotations


  Subsystems in Which This Protein Plays a Role

This PEG is currently not present in any subsytem.

  Protein Sequence

>fig|216591.1.peg.1893 
MLPCLCLLWLPVSVVATGRIELFMPHHVKTRMQCLNLSFHHVVLYGDPQEVRRWNAVQHQ
YLRLWVGRKLVCKMQVRADFIIKVPIHGLERRQPGSLVEGDSRYPACRRICNAKRTSQFP
KRGWVNSDDYPILAPIFLAITVEHSVVRKTDGHTYRVSTIKPILIVHSTNNIPAIQPITT
YQPVRKDRREVRESSEMHQILDTSFGRKLLYCSCYHHAPEHIWSEYFCFQCLIYLS

MD5 = b01aea4eca42116fc2b95374ca3fd50f


  DNA Sequence

>fig|216591.1.peg.1893 
gtgttgccatgtctatgcctgctgtggcttccagtgagcgtagtcgctacgggccgaata
gaactcttcatgccgcaccacgtgaagacccggatgcaatgcctcaacttgagctttcat
catgtcgttttgtacggcgacccccaagaagtacgccgctggaacgccgtccaacatcaa
tacctccgcctgtgggttggtcggaaactggtctgcaagatgcaggttcgcgcggacttt
atcatcaaagtccccatacatggcttggaacgcaggcaacccggttcgctggtcgagggg
gatagccgataccctgcctgccgccgcatttgtaatgcaaaacgcacatcgcaatttcca
aagcgcggatgggtcaattccgacgactacccaattctcgccccgattttcttggcgata
acggtagaacattctgtagttcggaaaaccgatggacacacataccgcgtcagtacgatc
aagcctatattgatcgttcacagcaccaataacattccggccatccagccgattacgaca
taccaacccgtgcgcaaggatcgacgcgaggttagagagtctagtgaaatgcaccaaata
cttgatacctctttcggccgcaaactcttgtattgttcttgctaccatcatgcccccgag
catatttggtctgaatatttttgctttcagtgcctaatatacctcagttga


  DNA with Flanking Sequence

>fig|216591.1.peg.1893 
gtcagagaatgcgcgataagtcaaaacaatcttggcaagttctggttgcctatgcagagc
gttgatgtacaaccaatcatagaacgccgtccggggttgaagcggccattctttgccata
ccattgaaatctaatcatcctgccaaattgtgtaaggcgaggatcgcgctttgcgtcaat
tgacttggcattgagaaggtccgtaaatgggcctccgcgctcaaatactttgctcgcttg
ataggcgcactcaagactgtattcccggcgtggcgtctttatcatcagattgaacgcgct
caacttgacgccatactcatccttggacttgctggaaatctctaacactctatcgacgtg
cagtcgctccttcgccgtctggtggagcgaatcgattgacttctgagcttggctctttgc
catgccgggaaaccattggaactccacaagctccgtcgagacgagcaaggggccactaag
ggacgggataaatatcgggcgtgttgccatgtctatgcctgctgtggcttccagtgagcg
tagtcgctacgggccgaatagaactcttcatgccgcaccacgtgaagacccggatgcaat
gcctcaacttgagctttcatcatgtcgttttgtacggcgacccccaagaagtacgccgct
ggaacgccgtccaacatcaatacctccgcctgtgggttggtcggaaactggtctgcaaga
tgcaggttcgcgcggactttatcatcaaagtccccatacatggcttggaacgcaggcaac
ccggttcgctggtcgagggggatagccgataccctgcctgccgccgcatttgtaatgcaa
aacgcacatcgcaatttccaaagcgcggatgggtcaattccgacgactacccaattctcg
ccccgattttcttggcgataacggtagaacattctgtagttcggaaaaccgatggacaca
cataccgcgtcagtacgatcaagcctatattgatcgttcacagcaccaataacattccgg
ccatccagccgattacgacataccaacccgtgcgcaaggatcgacgcgaggttagagagt
ctagtgaaatgcaccaaatacttgatacctctttcggccgcaaactcttgtattgttctt
gctaccatcatgcccccgagcatatttggtctgaatatttttgctttcagtgcctaatat
acctcagttgacaaccttactacctaacagtcgcgttcttcggttcgctcccaagatcat
gccgagtcccttgttgcgtctaatatctccatcatcgtccctgcgttgcgctgcgccaca
tcccgatagcaattgttgaacgtcacatgaatattagccgaacggtccgcgatttccgca
atgggtcgcgcaagctcgcgtagctcgtcgtccccatactcgtaattgaaccgttcggcc
gctgactctgccccgctccaggtcgaaacgttgcggccatgcagacgcacaatcgccagt
tcgggagaagtcacctcccagaccgtatgtgcgcgcttcgttacgccttccggtgcgtca
acgatgacatgcacgatgccgcgttcacgctccatcgcaagcgtggattcccggttcttg
tcattgaaccagctttcatgtcggaattcgaacgccgtcaggagcggatgcatccgttcc
gcgcagtgctcaacgtgcgctatcgacttcg


  Assignments for Essentially Identical Proteins

No essentially identical proteins found

  Links to Related Entries in Other Sites

This PEG has no links.
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  Functional Coupling

Score Peg Function


  Attributes

Help on Attributes

Key
Link Explains Key		 Value
isoelectric_point 9.57
molecular_weight 27620
PSORT::unknown unknown
similar_to_human no


  Protein Families

No protein families found

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