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SEED version cvs.1555556707 (3/17/2019 22:5:7) on gum.mcs.anl.gov
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Protein fig|216591.1.peg.1892: Burkholderia cenocepacia J2315

This feature in The SEED Viewer

NCBI Taxonomy Id: 216591

Current Assignment: COG1801: Uncharacterized conserved protein
Translate Function Assignments



Context on contig Bcep157f02.p2kA148 from base 306691 to 317889 (11199 bp)

Fid Start End Size
(nt)
  Gap Find
best
clusters
Pins Fc-sc SS Ev Function Aliases
1885 308010 306691 1320 -           FIG00467626: hypothetical protein  
1886 308641 307976 666 - -35         putative TerS  
1887 309488 308832 657 - 190            
1888 309932 309543 390 - 54            
1889 310783 310202 582 - 269         HNH endonuclease  
1890 311021 311347 327 + 237     1: 1   hypothetical protein  
1891 311659 311378 282 - 30            
1892 311773 312675 903 + 113     1: 4   COG1801: Uncharacterized conserved protein  
1893 313431 312721 711 - 45            
1894 313485 314123 639 + 53     1: 1   hypothetical protein  
1895 314522 314157 366 - 33            
1896 315485 314688 798 - 165         Antirepressor  
7776 316282 315800 483 - 314            
1897 316527 316270 258 - -13            
1898 317889 316687 1203 - 159     3: 5 2 3   DNA primase (EC 2.7.7.-)  

Annotation History   /   View All Related Annotations Help on Annotations



  Subsystems in Which This Protein Plays a Role

Subsystem Curator Role
tRNA_cmo5U_synthesis vcrecy COG1801: Uncharacterized conserved protein


  Protein Sequence

>fig|216591.1.peg.1892 COG1801: Uncharacterized conserved protein
MAILVGTASWTDKTLIESGAFYPPGCNTPEARLRYYASVFPVVEVDSSYYAMPSATNSAL
WVERTPEGFVFDLKAFRLFTGHQTEPKFFPKDLQKELPDTGKKNLYYKDVPPPIVEELWS
RFFEALRPLHDAGKLGAVLFQFPHWVTAVPKSIAHVEHCAERMHPLLTAFEFRHESWFND
KNRESTLAMERERGIVHVIVDAPEGVTKRAHTVWEVTSPELAIVRLHGRNVSTWSGAESA
AERFNYEYGDDELRELARPIAEIADRSANIHVTFNNCYRDVAQRNAGTMMEILDATRDSA

MD5 = fcfd31658e165c4690e3f4e1afeb843a


  DNA Sequence

>fig|216591.1.peg.1892 COG1801: Uncharacterized conserved protein
atggcgattctcgtaggtacggcgtcttggacggacaaaacgctgatcgagtccggagcc
ttttaccctcccggctgtaacaccccggaagcccgcttgaggtactacgcgagcgtgttt
cccgtggtcgaggtggattcctcctactatgcgatgccgagcgccacgaacagcgcgcta
tgggtcgagcggacgcccgaggggtttgtgtttgacctcaaggcgttcaggctgtttacg
ggccaccagacggagcccaagtttttccccaaggatctacagaaggaactaccggataca
ggcaaaaagaacctgtactacaaagacgttccgccgccgattgtcgaggaactatggtcg
cgcttctttgaggcgctacgccccctgcatgacgcgggcaagctcggtgccgtgctgttc
cagtttccgcattgggtaactgcggtgccgaagtcgatagcgcacgttgagcactgcgcg
gaacggatgcatccgctcctgacggcgttcgaattccgacatgaaagctggttcaatgac
aagaaccgggaatccacgcttgcgatggagcgtgaacgcggcatcgtgcatgtcatcgtt
gacgcaccggaaggcgtaacgaagcgcgcacatacggtctgggaggtgacttctcccgaa
ctggcgattgtgcgtctgcatggccgcaacgtttcgacctggagcggggcagagtcagcg
gccgaacggttcaattacgagtatggggacgacgagctacgcgagcttgcgcgacccatt
gcggaaatcgcggaccgttcggctaatattcatgtgacgttcaacaattgctatcgggat
gtggcgcagcgcaacgcagggacgatgatggagatattagacgcaacaagggactcggca
tga


  DNA with Flanking Sequence

>fig|216591.1.peg.1892 COG1801: Uncharacterized conserved protein
cgggtttggtccggtaagggccgcgcgcccggttggctggccggtcacgaagccgaatac
ttgatccagcagtaagacgacgccccgccaccgtgcggggcgttttcatttcgggccgtt
ggtgtaccgggtcggccgtgcgaattgatgtgcgagctggtcgcaagcttccgtggtgag
atcgtccagaccaattgcgcgggtccagaacgcgcacccggcccgtggccgcgctacgac
gccttcgtacgttggatgtttgcatatggcgtgcgacccgtcgcagaacgcgacgccgcc
ccaatgctcgcaaacccaacaggtgcgatcaccgatcctgtctagaaataggccgcgacc
gcagccgtcgttgctcatgacgcacaaccactgtataaatatacagtctatcgcgcgcta
agatgaggctgtcaaccggaagaattggggacggcgaaaatcccgcgtgtggctgtctcg
gcatctgagcggaggcgagcatggcgattctcgtaggtacggcgtcttggacggacaaaa
cgctgatcgagtccggagccttttaccctcccggctgtaacaccccggaagcccgcttga
ggtactacgcgagcgtgtttcccgtggtcgaggtggattcctcctactatgcgatgccga
gcgccacgaacagcgcgctatgggtcgagcggacgcccgaggggtttgtgtttgacctca
aggcgttcaggctgtttacgggccaccagacggagcccaagtttttccccaaggatctac
agaaggaactaccggatacaggcaaaaagaacctgtactacaaagacgttccgccgccga
ttgtcgaggaactatggtcgcgcttctttgaggcgctacgccccctgcatgacgcgggca
agctcggtgccgtgctgttccagtttccgcattgggtaactgcggtgccgaagtcgatag
cgcacgttgagcactgcgcggaacggatgcatccgctcctgacggcgttcgaattccgac
atgaaagctggttcaatgacaagaaccgggaatccacgcttgcgatggagcgtgaacgcg
gcatcgtgcatgtcatcgttgacgcaccggaaggcgtaacgaagcgcgcacatacggtct
gggaggtgacttctcccgaactggcgattgtgcgtctgcatggccgcaacgtttcgacct
ggagcggggcagagtcagcggccgaacggttcaattacgagtatggggacgacgagctac
gcgagcttgcgcgacccattgcggaaatcgcggaccgttcggctaatattcatgtgacgt
tcaacaattgctatcgggatgtggcgcagcgcaacgcagggacgatgatggagatattag
acgcaacaagggactcggcatgatcttgggagcgaaccgaagaacgcgactgttaggtag
taaggttgtcaactgaggtatattaggcactgaaagcaaaaatattcagaccaaatatgc
tcgggggcatgatggtagcaagaacaatacaagagtttgcggccgaaagaggtatcaagt
atttggtgcatttcactagactctctaacctcgcgtcgatccttgcgcacgggttggtat
gtcgtaatcggctggatggccggaatgttattggtgctgtgaacgatcaatataggcttg
atcgtactgacgcggtatgtgtgtccatcggttttccgaactacagaatgttctaccgtt
atcgccaagaaaatcggggcgagaattgggtagtcgtcggaattgacccatccgcgcttt
ggaaattgcgatgtgcgttttgcattacaaatgcggcggcaggcagggtatcggctatcc
ccctcgaccagcgaaccgggttgcctgcgttccaagccatgta


  Assignments for Essentially Identical Proteins

Id Organism Who ASSIGN Assignment
emb|CAR55743.1 Burkholderia cenocepacia J2315 EMBL   hypothetical phage protein
fig|216591.5.peg.5665 Burkholderia cenocepacia J2315 FIG   COG1801: Uncharacterized conserved protein
gi|198039772 Burkholderia cenocepacia J2315 NCBI   hypothetical phage protein
gi|206563732 Burkholderia cenocepacia J2315 NCBI   hypothetical protein BCAM1883
kegg|bcj:BCAM1883 Burkholderia cenocepacia J2315 KEGG   hypothetical protein
ref|YP_002234495.1 Burkholderia cenocepacia J2315 RefSeq   hypothetical protein BCAM1883
tr|B4EME7   TrEMBL   Hypothetical phage protein


  Links to Related Entries in Other Sites

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  Functional Coupling

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  Attributes

Help on Attributes

Key
Link Explains Key
Value
CDD::41922 959.400;21-294
isoelectric_point 5.96
molecular_weight 34122
PFAM::PF01904 937.510;21-294
PSORT::unknown unknown
similar_to_human no


  Protein Families

No protein families found

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